RNA–Protein interactions for RNA: ENST00000395358.7

RAPGEF3-202, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 4,092 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-202ENST00000395358 DNAJC3Q13217 504 aa12□□□□□ -0.49
RAPGEF3-202ENST00000395358 LONRF1Q17RB8 773 aa12□□□□□ -0.49
RAPGEF3-202ENST00000395358 TMEM214Q6NUQ4 689 aaKnown RBP12□□□□□ -0.49
RAPGEF3-202ENST00000395358 USP17L2Q6R6M4 530 aa12□□□□□ -0.49
RAPGEF3-202ENST00000395358 SYCE1Q8N0S2 351 aa12□□□□□ -0.49
RAPGEF3-202ENST00000395358 CPXCR1Q8N123 301 aa12□□□□□ -0.49
RAPGEF3-202ENST00000395358 CALML6Q8TD86 181 aa12□□□□□ -0.49
RAPGEF3-202ENST00000395358 RSPH1Q8WYR4 309 aa12□□□□□ -0.49
RAPGEF3-202ENST00000395358 SLC10A4Q96EP9 437 aa12□□□□□ -0.49
RAPGEF3-202ENST00000395358 RNF26Q9BY78 433 aaPredicted RBP12□□□□□ -0.49
RAPGEF3-202ENST00000395358 BHMT2Q9H2M3 363 aa12□□□□□ -0.49
RAPGEF3-202ENST00000395358 TRPC7Q9HCX4 862 aa12□□□□□ -0.49
RAPGEF3-202ENST00000395358 HOMER2Q9NSB8 354 aa12□□□□□ -0.49
RAPGEF3-202ENST00000395358 ADAMTS1Q9UHI8 967 aa12□□□□□ -0.49
RAPGEF3-202ENST00000395358 HPSEQ9Y251 543 aa12□□□□□ -0.49
RAPGEF3-202ENST00000395358 TACC3Q9Y6A5 838 aa12□□□□□ -0.49
RAPGEF3-202ENST00000395358 ADCY6O43306 1168 aa12□□□□□ -0.49
RAPGEF3-202ENST00000395358 PEX11AO75192 247 aa12□□□□□ -0.49
RAPGEF3-202ENST00000395358 GFAPP14136 432 aa12□□□□□ -0.49
RAPGEF3-202ENST00000395358 CD44P16070 742 aaKnown RBP12□□□□□ -0.49
RAPGEF3-202ENST00000395358 PTPN4P29074 926 aa12□□□□□ -0.49
RAPGEF3-202ENST00000395358 RCAN1P53805 252 aa12□□□□□ -0.49
RAPGEF3-202ENST00000395358 HDAC4P56524 1084 aa12□□□□□ -0.49
RAPGEF3-202ENST00000395358 MAP3K7CLP57077 242 aa12□□□□□ -0.49
RAPGEF3-202ENST00000395358 PRAMEF18Q5VWM3 479 aa12□□□□□ -0.49
RAPGEF3-202ENST00000395358 GRIP2Q9C0E4 1043 aa12□□□□□ -0.49
RAPGEF3-202ENST00000395358 DDX4Q9NQI0 724 aaKnown RBP12□□□□□ -0.49
RAPGEF3-202ENST00000395358 A0A1W2PQC6 194 aa12□□□□□ -0.49
RAPGEF3-202ENST00000395358 DDTLA6NHG4 134 aaPredicted RBP12□□□□□ -0.49
RAPGEF3-202ENST00000395358 HARSP12081 509 aaKnown RBP12□□□□□ -0.49
RAPGEF3-202ENST00000395358 POLR2FP61218 127 aaKnown RBP12□□□□□ -0.49
RAPGEF3-202ENST00000395358 AMPD3Q01432 767 aa12□□□□□ -0.49
RAPGEF3-202ENST00000395358 LSAMPQ13449 338 aa12□□□□□ -0.49
RAPGEF3-202ENST00000395358 TMEM266Q2M3C6 531 aa12□□□□□ -0.49
RAPGEF3-202ENST00000395358 SEL1L2Q5TEA6 688 aa12□□□□□ -0.49
RAPGEF3-202ENST00000395358 ZNF658Q5TYW1 1059 aaPredicted RBP12□□□□□ -0.49
RAPGEF3-202ENST00000395358 IYDQ6PHW0 289 aa12□□□□□ -0.49
RAPGEF3-202ENST00000395358 USP49Q70CQ1 688 aa12□□□□□ -0.49
RAPGEF3-202ENST00000395358 UBE2Q1Q7Z7E8 422 aa12□□□□□ -0.49
RAPGEF3-202ENST00000395358 PALB2Q86YC2 1186 aa12□□□□□ -0.49
RAPGEF3-202ENST00000395358 SNX29Q8TEQ0 813 aa12□□□□□ -0.49
RAPGEF3-202ENST00000395358 SKA1Q96BD8 255 aa12□□□□□ -0.49
RAPGEF3-202ENST00000395358 KIAA1683Q9H0B3 1180 aa12□□□□□ -0.49
RAPGEF3-202ENST00000395358 GIMAP4Q9NUV9 329 aa12□□□□□ -0.49
RAPGEF3-202ENST00000395358 MTMR4Q9NYA4 1195 aa12□□□□□ -0.49
RAPGEF3-202ENST00000395358 TAF1LQ8IZX4 1826 aa11.99□□□□□ -0.49
RAPGEF3-202ENST00000395358 POC1B-GALNT4F8VUJ3 575 aa11.99□□□□□ -0.49
RAPGEF3-202ENST00000395358 GOLGA8TH3BQL2 631 aa11.99□□□□□ -0.49
RAPGEF3-202ENST00000395358 RNF225M0QZC1 329 aaPredicted RBP11.99□□□□□ -0.49
RAPGEF3-202ENST00000395358 GIPC1O14908 333 aa11.99□□□□□ -0.49
RAPGEF3-202ENST00000395358 PSMG1O95456 288 aa11.99□□□□□ -0.49
RAPGEF3-202ENST00000395358 EPHB1P54762 984 aa11.99□□□□□ -0.49
RAPGEF3-202ENST00000395358 SPARCL1Q14515 664 aa11.99□□□□□ -0.49
RAPGEF3-202ENST00000395358 UAP1Q16222 522 aaPredicted RBP11.99□□□□□ -0.49
RAPGEF3-202ENST00000395358 KRT80Q6KB66 452 aa11.99□□□□□ -0.49
RAPGEF3-202ENST00000395358 TMC5Q6UXY8 1006 aa11.99□□□□□ -0.49
RAPGEF3-202ENST00000395358 GADL1Q6ZQY3 521 aa11.99□□□□□ -0.49
RAPGEF3-202ENST00000395358 KCTD1Q719H9 257 aa11.99□□□□□ -0.49
RAPGEF3-202ENST00000395358 CROCCP3Q8IVE0 287 aa11.99□□□□□ -0.49
RAPGEF3-202ENST00000395358 C1orf131Q8NDD1 294 aaKnown RBP11.99□□□□□ -0.49
RAPGEF3-202ENST00000395358 ATP8B4Q8TF62 1192 aa11.99□□□□□ -0.49
RAPGEF3-202ENST00000395358 CEP295NLQ96MC4 621 aa11.99□□□□□ -0.49
RAPGEF3-202ENST00000395358 DNAI2Q9GZS0 605 aa11.99□□□□□ -0.49
RAPGEF3-202ENST00000395358 ZC4H2Q9NQZ6 224 aa11.99□□□□□ -0.49
RAPGEF3-202ENST00000395358 AASDHPPTQ9NRN7 309 aa11.99□□□□□ -0.49
RAPGEF3-202ENST00000395358 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.99□□□□□ -0.49
RAPGEF3-202ENST00000395358 ZHX2Q9Y6X8 837 aa11.99□□□□□ -0.49
RAPGEF3-202ENST00000395358 SLC26A4O43511 780 aa11.99□□□□□ -0.49
RAPGEF3-202ENST00000395358 SCG2P13521 617 aa11.99□□□□□ -0.49
RAPGEF3-202ENST00000395358 KRT4P19013 534 aa11.99□□□□□ -0.49
RAPGEF3-202ENST00000395358 CPA2P48052 419 aa11.99□□□□□ -0.49
RAPGEF3-202ENST00000395358 EPM2AIP1Q7L775 607 aaPredicted RBP11.99□□□□□ -0.49
RAPGEF3-202ENST00000395358 IGDCC4Q8TDY8 1250 aa11.99□□□□□ -0.49
RAPGEF3-202ENST00000395358 DENND2DQ9H6A0 471 aaPredicted RBP11.99□□□□□ -0.49
RAPGEF3-202ENST00000395358 TRNAU1APQ9NX07 287 aaKnown RBP11.99□□□□□ -0.49
RAPGEF3-202ENST00000395358 SCHIP1Q9P0W5 487 aaPredicted RBP11.99□□□□□ -0.49
RAPGEF3-202ENST00000395358 SEL1LQ9UBV2 794 aa11.99□□□□□ -0.49
RAPGEF3-202ENST00000395358 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.99□□□□□ -0.49
RAPGEF3-202ENST00000395358 LRRC53A6NM62 1247 aa11.99□□□□□ -0.49
RAPGEF3-202ENST00000395358 RASA4BC9J798 803 aa11.99□□□□□ -0.49
RAPGEF3-202ENST00000395358 RASA4O43374 803 aa11.99□□□□□ -0.49
RAPGEF3-202ENST00000395358 GSTT2P0CG29 244 aa11.99□□□□□ -0.49
RAPGEF3-202ENST00000395358 GSTT2BP0CG30 244 aa11.99□□□□□ -0.49
RAPGEF3-202ENST00000395358 GRIN1Q05586 938 aa11.99□□□□□ -0.49
RAPGEF3-202ENST00000395358 NR5A1Q13285 461 aa11.99□□□□□ -0.49
RAPGEF3-202ENST00000395358 PDCD4Q53EL6 469 aaKnown RBP11.99□□□□□ -0.49
RAPGEF3-202ENST00000395358 NUDCD3Q8IVD9 361 aa11.99□□□□□ -0.49
RAPGEF3-202ENST00000395358 TLR10Q9BXR5 811 aa11.99□□□□□ -0.49
RAPGEF3-202ENST00000395358 OXCT2Q9BYC2 517 aaPredicted RBP11.99□□□□□ -0.49
RAPGEF3-202ENST00000395358 RAB34Q9BZG1 259 aa11.99□□□□□ -0.49
RAPGEF3-202ENST00000395358 DSEQ9UL01 958 aa11.99□□□□□ -0.49
RAPGEF3-202ENST00000395358 SRPRBQ9Y5M8 271 aaKnown RBP11.99□□□□□ -0.49
RAPGEF3-202ENST00000395358 PPP2R3BQ9Y5P8 575 aa11.99□□□□□ -0.49
RAPGEF3-202ENST00000395358 XPO1O14980 1071 aaKnown RBP11.98□□□□□ -0.49
RAPGEF3-202ENST00000395358 HNRNPCL1O60812 293 aaKnown RBP11.98□□□□□ -0.49
RAPGEF3-202ENST00000395358 KLK7P49862 253 aa11.98□□□□□ -0.49
RAPGEF3-202ENST00000395358 STAT2P52630 851 aa11.98□□□□□ -0.49
RAPGEF3-202ENST00000395358 PIGWQ7Z7B1 504 aa11.98□□□□□ -0.49
RAPGEF3-202ENST00000395358 DNAJC7Q99615 494 aa11.98□□□□□ -0.49
RAPGEF3-202ENST00000395358 FADS3Q9Y5Q0 445 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms