RNA–Protein interactions for RNA: ENST00000389757.7

PKP4-201, Transcript of plakophilin 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKP4, Length 5,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-201ENST00000389757 SLC9A1P19634 815 aa10.85□□□□□ -0.67
PKP4-201ENST00000389757 DEUP1Q05D60 604 aa10.85□□□□□ -0.67
PKP4-201ENST00000389757 LY6KQ17RY6 165 aa10.85□□□□□ -0.67
PKP4-201ENST00000389757 NFRKBQ6P4R8 1299 aa10.85□□□□□ -0.67
PKP4-201ENST00000389757 SHCBP1Q8NEM2 672 aa10.85□□□□□ -0.67
PKP4-201ENST00000389757 UBR1Q8IWV7 1749 aa10.85□□□□□ -0.67
PKP4-201ENST00000389757 SEC31AO94979 1220 aaKnown RBP10.85□□□□□ -0.67
PKP4-201ENST00000389757 ZKSCAN8Q15776 578 aaPredicted RBP10.85□□□□□ -0.67
PKP4-201ENST00000389757 GOLGA7BQ2TAP0 167 aa10.85□□□□□ -0.67
PKP4-201ENST00000389757 ALS2CLQ60I27 953 aa10.85□□□□□ -0.67
PKP4-201ENST00000389757 CHADLQ6NUI6 762 aa10.85□□□□□ -0.67
PKP4-201ENST00000389757 ZC3H18Q86VM9 953 aaKnown RBP10.85□□□□□ -0.67
PKP4-201ENST00000389757 UBE2Q2Q8WVN8 375 aa10.85□□□□□ -0.67
PKP4-201ENST00000389757 YME1L1Q96TA2 773 aa10.85□□□□□ -0.67
PKP4-201ENST00000389757 HMX1Q9NP08 348 aaPredicted RBP10.85□□□□□ -0.67
PKP4-201ENST00000389757 KRT14P02533 472 aa10.85□□□□□ -0.67
PKP4-201ENST00000389757 PCK1P35558 622 aa10.85□□□□□ -0.67
PKP4-201ENST00000389757 CASP2P42575 452 aa10.85□□□□□ -0.67
PKP4-201ENST00000389757 TSNAXIP1Q2TAA8 658 aa10.85□□□□□ -0.67
PKP4-201ENST00000389757 ELOA2Q8IYF1 753 aaPredicted RBP10.85□□□□□ -0.67
PKP4-201ENST00000389757 CNOT10Q9H9A5 744 aaKnown RBP10.85□□□□□ -0.67
PKP4-201ENST00000389757 ABI2Q9NYB9 513 aaPredicted RBP10.85□□□□□ -0.67
PKP4-201ENST00000389757 NAGPAQ9UK23 515 aa10.85□□□□□ -0.67
PKP4-201ENST00000389757 FZD1Q9UP38 647 aa10.85□□□□□ -0.67
PKP4-201ENST00000389757 PPME1Q9Y570 386 aa10.85□□□□□ -0.67
PKP4-201ENST00000389757 C3P01024 1663 aa10.85□□□□□ -0.67
PKP4-201ENST00000389757 SNX2O60749 519 aa10.85□□□□□ -0.67
PKP4-201ENST00000389757 SATB1Q01826 763 aa10.85□□□□□ -0.67
PKP4-201ENST00000389757 PIGHQ14442 188 aaPredicted RBP10.85□□□□□ -0.67
PKP4-201ENST00000389757 DBN1Q16643 649 aa10.85□□□□□ -0.67
PKP4-201ENST00000389757 EFHC1Q5JVL4 640 aa10.85□□□□□ -0.67
PKP4-201ENST00000389757 TLK2Q86UE8 772 aa10.85□□□□□ -0.67
PKP4-201ENST00000389757 PI4K2AQ9BTU6 479 aa10.85□□□□□ -0.67
PKP4-201ENST00000389757 SETD4Q9NVD3 440 aa10.85□□□□□ -0.67
PKP4-201ENST00000389757 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.85□□□□□ -0.673e-13■■■■□ 21.8
PKP4-201ENST00000389757 STK38LQ9Y2H1 464 aa10.85□□□□□ -0.67
PKP4-201ENST00000389757 AK9Q5TCS8 1911 aa10.85□□□□□ -0.67
PKP4-201ENST00000389757 E5RI56 91 aa10.84□□□□□ -0.67
PKP4-201ENST00000389757 HOXC6P09630 235 aa10.84□□□□□ -0.67
PKP4-201ENST00000389757 CCT5P48643 541 aa10.84□□□□□ -0.67
PKP4-201ENST00000389757 NSUN2Q08J23 767 aaKnown RBP eCLIP10.84□□□□□ -0.67
PKP4-201ENST00000389757 KLHL38Q2WGJ6 581 aa10.84□□□□□ -0.67
PKP4-201ENST00000389757 CCDC144BQ3MJ40 725 aa10.84□□□□□ -0.67
PKP4-201ENST00000389757 GPAT2Q6NUI2 795 aa10.84□□□□□ -0.67
PKP4-201ENST00000389757 TRAPPC11Q7Z392 1133 aa10.84□□□□□ -0.67
PKP4-201ENST00000389757 ZNF677Q86XU0 584 aa10.84□□□□□ -0.67
PKP4-201ENST00000389757 RCOR2Q8IZ40 523 aa10.84□□□□□ -0.67
PKP4-201ENST00000389757 ARHGAP18Q8N392 663 aa10.84□□□□□ -0.67
PKP4-201ENST00000389757 OR6P1Q8NGX9 317 aa10.84□□□□□ -0.67
PKP4-201ENST00000389757 ASAP3Q8TDY4 903 aa10.84□□□□□ -0.67
PKP4-201ENST00000389757 MCEEQ96PE7 176 aa10.84□□□□□ -0.67
PKP4-201ENST00000389757 PCDHB8Q9UN66 801 aa10.84□□□□□ -0.67
PKP4-201ENST00000389757 ITIH6Q6UXX5 1313 aa10.84□□□□□ -0.67
PKP4-201ENST00000389757 RSPH10B2B2RC85 870 aa10.84□□□□□ -0.67
PKP4-201ENST00000389757 NVLO15381 856 aaKnown RBP10.84□□□□□ -0.67
PKP4-201ENST00000389757 RSPH10BP0C881 870 aa10.84□□□□□ -0.67
PKP4-201ENST00000389757 IRF1P10914 325 aa10.84□□□□□ -0.67
PKP4-201ENST00000389757 INSRRP14616 1297 aa10.84□□□□□ -0.67
PKP4-201ENST00000389757 MX2P20592 715 aa10.84□□□□□ -0.67
PKP4-201ENST00000389757 YY1P25490 414 aa10.84□□□□□ -0.67
PKP4-201ENST00000389757 GTF2H1P32780 548 aa10.84□□□□□ -0.67
PKP4-201ENST00000389757 GALCP54803 685 aa10.84□□□□□ -0.67
PKP4-201ENST00000389757 EIF3EP60228 445 aaKnown RBP10.84□□□□□ -0.67
PKP4-201ENST00000389757 IRX4P78413 519 aa10.84□□□□□ -0.67
PKP4-201ENST00000389757 MRPS25P82663 173 aaKnown RBP10.84□□□□□ -0.67
PKP4-201ENST00000389757 GRIK4Q16099 956 aa10.84□□□□□ -0.67
PKP4-201ENST00000389757 PAN2Q504Q3 1202 aaKnown RBP10.84□□□□□ -0.67
PKP4-201ENST00000389757 NOVA2Q9UNW9 492 aaKnown RBP10.84□□□□□ -0.67
PKP4-201ENST00000389757 SALL3Q9BXA9 1300 aa10.84□□□□□ -0.67
PKP4-201ENST00000389757 GARTP22102 1010 aa10.84□□□□□ -0.67
PKP4-201ENST00000389757 DEFB115Q30KQ5 88 aa10.84□□□□□ -0.67
PKP4-201ENST00000389757 SEZ6Q53EL9 994 aa10.84□□□□□ -0.67
PKP4-201ENST00000389757 TDRD10Q5VZ19 366 aaKnown RBP10.84□□□□□ -0.67
PKP4-201ENST00000389757 SPATS2Q86XZ4 545 aaKnown RBP10.84□□□□□ -0.67
PKP4-201ENST00000389757 CDC26Q8NHZ8 85 aa10.84□□□□□ -0.67
PKP4-201ENST00000389757 TTC8Q8TAM2 541 aa10.84□□□□□ -0.67
PKP4-201ENST00000389757 RSRC1Q96IZ7 334 aaKnown RBP10.84□□□□□ -0.67
PKP4-201ENST00000389757 PACSIN2Q9UNF0 486 aaPredicted RBP10.84□□□□□ -0.67
PKP4-201ENST00000389757 POTEAQ6S8J7 498 aa10.84□□□□□ -0.67
PKP4-201ENST00000389757 TAS2R42Q7RTR8 314 aa10.84□□□□□ -0.67
PKP4-201ENST00000389757 SLC7A14Q8TBB6 771 aa10.84□□□□□ -0.67
PKP4-201ENST00000389757 DDX47Q9H0S4 455 aaKnown RBP10.84□□□□□ -0.67
PKP4-201ENST00000389757 SARS2Q9NP81 518 aaKnown RBP10.84□□□□□ -0.67
PKP4-201ENST00000389757 A0A087WZ62 844 aa10.84□□□□□ -0.67
PKP4-201ENST00000389757 COPEO14579 308 aa10.84□□□□□ -0.67
PKP4-201ENST00000389757 MAP3K7O43318 606 aa10.84□□□□□ -0.67
PKP4-201ENST00000389757 RAG1P15918 1043 aa10.84□□□□□ -0.67
PKP4-201ENST00000389757 HARS2P49590 506 aaKnown RBP10.84□□□□□ -0.67
PKP4-201ENST00000389757 PTPAQ15257 358 aa10.84□□□□□ -0.67
PKP4-201ENST00000389757 ANO4Q32M45 955 aa10.84□□□□□ -0.67
PKP4-201ENST00000389757 ATG16L1Q676U5 607 aa10.84□□□□□ -0.67
PKP4-201ENST00000389757 CCDC137Q6PK04 289 aaKnown RBP10.84□□□□□ -0.67
PKP4-201ENST00000389757 CERS5Q8N5B7 392 aa10.84□□□□□ -0.67
PKP4-201ENST00000389757 UBA3Q8TBC4 463 aa10.84□□□□□ -0.67
PKP4-201ENST00000389757 ZC3H15Q8WU90 426 aaKnown RBP10.84□□□□□ -0.67
PKP4-201ENST00000389757 ANKS1AQ92625 1134 aa10.84□□□□□ -0.67
PKP4-201ENST00000389757 OSMRQ99650 979 aa10.84□□□□□ -0.67
PKP4-201ENST00000389757 FDXACB1Q9BRP7 624 aaPredicted RBP10.84□□□□□ -0.67
PKP4-201ENST00000389757 FAM187AA6NFU0 413 aa10.83□□□□□ -0.68
PKP4-201ENST00000389757 RHBDL3P58872 404 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms