RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 OR1G1P47890 313 aa12.62□□□□□ -0.39
PCDHA9-201ENST00000378122 EIF3EP60228 445 aaKnown RBP12.62□□□□□ -0.39
PCDHA9-201ENST00000378122 NFIXQ14938 502 aa12.62□□□□□ -0.39
PCDHA9-201ENST00000378122 LRRC31Q6UY01 552 aa12.62□□□□□ -0.39
PCDHA9-201ENST00000378122 TRPM8Q7Z2W7 1104 aa12.62□□□□□ -0.39
PCDHA9-201ENST00000378122 C11orf96Q7Z7L8 435 aa12.62□□□□□ -0.39
PCDHA9-201ENST00000378122 CDKL3Q8IVW4 592 aaPredicted RBP12.62□□□□□ -0.39
PCDHA9-201ENST00000378122 PIN4Q9Y237 131 aaKnown RBP12.62□□□□□ -0.39
PCDHA9-201ENST00000378122 PFASO15067 1338 aa12.62□□□□□ -0.39
PCDHA9-201ENST00000378122 ZFXP17010 805 aaPredicted RBP12.62□□□□□ -0.39
PCDHA9-201ENST00000378122 AARSP49588 968 aaKnown RBP eCLIP12.62□□□□□ -0.39
PCDHA9-201ENST00000378122 DTNBP1Q96EV8 351 aa12.62□□□□□ -0.39
PCDHA9-201ENST00000378122 EHD2Q9NZN4 543 aa12.62□□□□□ -0.39
PCDHA9-201ENST00000378122 DDNO94850 711 aaPredicted RBP12.62□□□□□ -0.39
PCDHA9-201ENST00000378122 ALDH1A1P00352 501 aa12.62□□□□□ -0.39
PCDHA9-201ENST00000378122 UBTFL6P0CB48 400 aaPredicted RBP12.62□□□□□ -0.39
PCDHA9-201ENST00000378122 LCP1P13796 627 aa12.62□□□□□ -0.39
PCDHA9-201ENST00000378122 CCND1P24385 295 aa12.62□□□□□ -0.39
PCDHA9-201ENST00000378122 GRIK1P39086 918 aa12.62□□□□□ -0.39
PCDHA9-201ENST00000378122 ST8SIA6P61647 398 aa12.62□□□□□ -0.39
PCDHA9-201ENST00000378122 BYSLQ13895 437 aaKnown RBP12.62□□□□□ -0.39
PCDHA9-201ENST00000378122 FAM102AQ5T9C2 384 aaPredicted RBP12.62□□□□□ -0.39
PCDHA9-201ENST00000378122 C11orf74Q86VG3 221 aa12.62□□□□□ -0.39
PCDHA9-201ENST00000378122 STAMBPL1Q96FJ0 436 aa12.62□□□□□ -0.39
PCDHA9-201ENST00000378122 P4HBP07237 508 aaKnown RBP12.62□□□□□ -0.39
PCDHA9-201ENST00000378122 SLC18A3Q16572 532 aa12.62□□□□□ -0.39
PCDHA9-201ENST00000378122 FOXR1Q6PIV2 292 aa12.62□□□□□ -0.39
PCDHA9-201ENST00000378122 SLC30A9Q6PML9 568 aa12.62□□□□□ -0.39
PCDHA9-201ENST00000378122 SGMS1Q86VZ5 419 aa12.62□□□□□ -0.39
PCDHA9-201ENST00000378122 NDUFAF2Q8N183 169 aa12.62□□□□□ -0.39
PCDHA9-201ENST00000378122 ZNF507Q8TCN5 953 aa12.62□□□□□ -0.39
PCDHA9-201ENST00000378122 FAM118BQ9BPY3 351 aa12.62□□□□□ -0.39
PCDHA9-201ENST00000378122 DHX35Q9H5Z1 703 aaKnown RBP12.62□□□□□ -0.39
PCDHA9-201ENST00000378122 FAM217BQ9NTX9 383 aaPredicted RBP12.62□□□□□ -0.39
PCDHA9-201ENST00000378122 SYF2O95926 243 aaKnown RBP12.62□□□□□ -0.39
PCDHA9-201ENST00000378122 TXNP10599 105 aaKnown RBP12.62□□□□□ -0.39
PCDHA9-201ENST00000378122 SDC4P31431 198 aa12.62□□□□□ -0.39
PCDHA9-201ENST00000378122 NEK2P51955 445 aa12.62□□□□□ -0.39
PCDHA9-201ENST00000378122 CNGA3Q16281 694 aa12.62□□□□□ -0.39
PCDHA9-201ENST00000378122 MAPK6Q16659 721 aa12.62□□□□□ -0.39
PCDHA9-201ENST00000378122 QRICH1Q2TAL8 776 aa12.62□□□□□ -0.39
PCDHA9-201ENST00000378122 TSSK1BQ9BXA7 367 aa12.62□□□□□ -0.39
PCDHA9-201ENST00000378122 KCNN4O15554 427 aa12.61□□□□□ -0.39
PCDHA9-201ENST00000378122 DGKZQ13574 1117 aa12.61□□□□□ -0.39
PCDHA9-201ENST00000378122 FASTKD1Q53R41 847 aaKnown RBP12.61□□□□□ -0.39
PCDHA9-201ENST00000378122 AGGF1Q8N302 714 aaeCLIP12.61□□□□□ -0.39
PCDHA9-201ENST00000378122 MCPH1Q8NEM0 835 aa12.61□□□□□ -0.39
PCDHA9-201ENST00000378122 SLC13A4Q9UKG4 626 aa12.61□□□□□ -0.39
PCDHA9-201ENST00000378122 SPATA31A3Q5VYP0 1347 aa12.61□□□□□ -0.39
PCDHA9-201ENST00000378122 ARHGEF9O43307 516 aa12.61□□□□□ -0.39
PCDHA9-201ENST00000378122 ADSSL1Q8N142 457 aa12.61□□□□□ -0.39
PCDHA9-201ENST00000378122 C4orf33Q8N1A6 199 aa12.61□□□□□ -0.39
PCDHA9-201ENST00000378122 GLT1D1Q96MS3 346 aa12.61□□□□□ -0.39
PCDHA9-201ENST00000378122 MTFR1LQ9H019 292 aa12.61□□□□□ -0.39
PCDHA9-201ENST00000378122 BATF3Q9NR55 127 aa12.61□□□□□ -0.39
PCDHA9-201ENST00000378122 AURKCQ9UQB9 309 aa12.61□□□□□ -0.39
PCDHA9-201ENST00000378122 DFFAO00273 331 aa12.61□□□□□ -0.39
PCDHA9-201ENST00000378122 SLC16A3O15427 465 aaKnown RBP12.61□□□□□ -0.39
PCDHA9-201ENST00000378122 SCP2P22307 547 aa12.61□□□□□ -0.39
PCDHA9-201ENST00000378122 QARSP47897 775 aaKnown RBP12.61□□□□□ -0.39
PCDHA9-201ENST00000378122 PBXIP1Q96AQ6 731 aa12.61□□□□□ -0.39
PCDHA9-201ENST00000378122 CLMNQ96JQ2 1002 aa12.61□□□□□ -0.39
PCDHA9-201ENST00000378122 UNC45AQ9H3U1 944 aa12.61□□□□□ -0.39
PCDHA9-201ENST00000378122 ZNF229Q9UJW7 825 aa12.61□□□□□ -0.39
PCDHA9-201ENST00000378122 CDHR2Q9BYE9 1310 aa12.61□□□□□ -0.39
PCDHA9-201ENST00000378122 CDH6P55285 790 aa12.61□□□□□ -0.39
PCDHA9-201ENST00000378122 KLC1Q07866 573 aa12.61□□□□□ -0.39
PCDHA9-201ENST00000378122 ATL2Q8NHH9 583 aa12.61□□□□□ -0.39
PCDHA9-201ENST00000378122 APOL5Q9BWW9 433 aa12.61□□□□□ -0.39
PCDHA9-201ENST00000378122 CELF4Q9BZC1 486 aaKnown RBP12.61□□□□□ -0.39
PCDHA9-201ENST00000378122 TBC1D22BQ9NU19 505 aa12.61□□□□□ -0.39
PCDHA9-201ENST00000378122 RBAKQ9NYW8 714 aaPredicted RBP12.61□□□□□ -0.39
PCDHA9-201ENST00000378122 IGF2BP3O00425 579 aaKnown RBP eCLIP12.61□□□□□ -0.39
PCDHA9-201ENST00000378122 CYP27B1O15528 508 aa12.61□□□□□ -0.39
PCDHA9-201ENST00000378122 TYK2P29597 1187 aa12.61□□□□□ -0.39
PCDHA9-201ENST00000378122 PTGISQ16647 500 aa12.61□□□□□ -0.39
PCDHA9-201ENST00000378122 THEMIS2Q5TEJ8 643 aa12.61□□□□□ -0.39
PCDHA9-201ENST00000378122 ATG9AQ7Z3C6 839 aa12.61□□□□□ -0.39
PCDHA9-201ENST00000378122 WWP1Q9H0M0 922 aa12.61□□□□□ -0.39
PCDHA9-201ENST00000378122 FBXO40Q9UH90 709 aa12.61□□□□□ -0.39
PCDHA9-201ENST00000378122 MSRAQ9UJ68 235 aa12.61□□□□□ -0.39
PCDHA9-201ENST00000378122 TARBP1Q13395 1621 aaKnown RBP12.61□□□□□ -0.39
PCDHA9-201ENST00000378122 NDUFB5O43674 189 aa12.6□□□□□ -0.39
PCDHA9-201ENST00000378122 IRAK1P51617 712 aa12.6□□□□□ -0.39
PCDHA9-201ENST00000378122 SEC24CP53992 1094 aa12.6□□□□□ -0.39
PCDHA9-201ENST00000378122 CATSPER1Q8NEC5 780 aa12.6□□□□□ -0.39
PCDHA9-201ENST00000378122 CELF1Q92879 486 aaKnown RBP12.6□□□□□ -0.39
PCDHA9-201ENST00000378122 SENP6Q9GZR1 1112 aaPredicted RBP12.6□□□□□ -0.39
PCDHA9-201ENST00000378122 XPO7Q9UIA9 1087 aaKnown RBP12.6□□□□□ -0.39
PCDHA9-201ENST00000378122 E2F8A0AVK6 867 aa12.6□□□□□ -0.39
PCDHA9-201ENST00000378122 ATP9BO43861 1147 aa12.6□□□□□ -0.39
PCDHA9-201ENST00000378122 GYPCP04921 128 aa12.6□□□□□ -0.39
PCDHA9-201ENST00000378122 PPARGP37231 505 aaPredicted RBP12.6□□□□□ -0.39
PCDHA9-201ENST00000378122 SYDE1Q6ZW31 735 aaPredicted RBP12.6□□□□□ -0.39
PCDHA9-201ENST00000378122 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.6□□□□□ -0.39
PCDHA9-201ENST00000378122 SEL1LQ9UBV2 794 aa12.6□□□□□ -0.39
PCDHA9-201ENST00000378122 GALCP54803 685 aa12.6□□□□□ -0.39
PCDHA9-201ENST00000378122 BCAR1P56945 870 aa12.6□□□□□ -0.39
PCDHA9-201ENST00000378122 ZC3H15Q8WU90 426 aaKnown RBP12.6□□□□□ -0.39
PCDHA9-201ENST00000378122 DAB2IPQ5VWQ8 1189 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms