RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 TRIM49P0CI25 452 aa18.54■□□□□ 0.56
CHTOP-203ENST00000368690 TRIM49CP0CI26 452 aa18.54■□□□□ 0.56
CHTOP-203ENST00000368690 ATF2P15336 505 aa18.54■□□□□ 0.56
CHTOP-203ENST00000368690 NMT1P30419 496 aaKnown RBP18.54■□□□□ 0.56
CHTOP-203ENST00000368690 TMEM63BQ5T3F8 832 aa18.54■□□□□ 0.56
CHTOP-203ENST00000368690 ZNF720Q7Z2F6 126 aa18.54■□□□□ 0.56
CHTOP-203ENST00000368690 TDRPQ86YL5 185 aa18.54■□□□□ 0.56
CHTOP-203ENST00000368690 TEKT4Q8WW24 435 aa18.54■□□□□ 0.56
CHTOP-203ENST00000368690 FAM136AQ96C01 138 aa18.54■□□□□ 0.56
CHTOP-203ENST00000368690 PRMT6Q96LA8 375 aaPredicted RBP18.54■□□□□ 0.56
CHTOP-203ENST00000368690 FIZ1Q96SL8 496 aa18.54■□□□□ 0.56
CHTOP-203ENST00000368690 POP1Q99575 1024 aaKnown RBP18.54■□□□□ 0.56
CHTOP-203ENST00000368690 KIAA1683Q9H0B3 1180 aa18.54■□□□□ 0.56
CHTOP-203ENST00000368690 TUFT1Q9NNX1 390 aa18.54■□□□□ 0.56
CHTOP-203ENST00000368690 SENP1Q9P0U3 644 aa18.54■□□□□ 0.56
CHTOP-203ENST00000368690 STOML1Q9UBI4 398 aa18.54■□□□□ 0.56
CHTOP-203ENST00000368690 HAO1Q9UJM8 370 aa18.54■□□□□ 0.56
CHTOP-203ENST00000368690 CETPP11597 493 aa18.53■□□□□ 0.56
CHTOP-203ENST00000368690 TARSP26639 723 aaKnown RBP18.53■□□□□ 0.56
CHTOP-203ENST00000368690 PTPN4P29074 926 aa18.53■□□□□ 0.56
CHTOP-203ENST00000368690 SREBF1P36956 1147 aa18.53■□□□□ 0.56
CHTOP-203ENST00000368690 SPARCL1Q14515 664 aa18.53■□□□□ 0.56
CHTOP-203ENST00000368690 PDK4Q16654 411 aa18.53■□□□□ 0.56
CHTOP-203ENST00000368690 QRICH1Q2TAL8 776 aa18.53■□□□□ 0.56
CHTOP-203ENST00000368690 CIAPIN1Q6FI81 312 aa18.53■□□□□ 0.56
CHTOP-203ENST00000368690 UIMC1Q96RL1 719 aa18.53■□□□□ 0.56
CHTOP-203ENST00000368690 EIF2AK1Q9BQI3 630 aaKnown RBP18.53■□□□□ 0.56
CHTOP-203ENST00000368690 NUP85Q9BW27 656 aa18.53■□□□□ 0.56
CHTOP-203ENST00000368690 UBE2TQ9NPD8 197 aaPredicted RBP18.53■□□□□ 0.56
CHTOP-203ENST00000368690 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.53■□□□□ 0.56
CHTOP-203ENST00000368690 SMG5Q9UPR3 1016 aaKnown RBP18.53■□□□□ 0.56
CHTOP-203ENST00000368690 PCDHA1Q9Y5I3 950 aa18.53■□□□□ 0.56
CHTOP-203ENST00000368690 RASA4BC9J798 803 aa18.52■□□□□ 0.56
CHTOP-203ENST00000368690 PMM2O15305 246 aa18.52■□□□□ 0.56
CHTOP-203ENST00000368690 RASA4O43374 803 aa18.52■□□□□ 0.56
CHTOP-203ENST00000368690 EDF1O60869 148 aaKnown RBP18.52■□□□□ 0.56
CHTOP-203ENST00000368690 HLA-DOAP06340 250 aa18.52■□□□□ 0.56
CHTOP-203ENST00000368690 GSTA2P09210 222 aa18.52■□□□□ 0.56
CHTOP-203ENST00000368690 DLATP10515 647 aaKnown RBP18.52■□□□□ 0.56
CHTOP-203ENST00000368690 GNAT1P11488 350 aa18.52■□□□□ 0.56
CHTOP-203ENST00000368690 SLC16A2P36021 539 aa18.52■□□□□ 0.56
CHTOP-203ENST00000368690 SLC45A4Q5BKX6 768 aa18.52■□□□□ 0.56
CHTOP-203ENST00000368690 MTHFD1LQ6UB35 978 aa18.52■□□□□ 0.56
CHTOP-203ENST00000368690 ZFPM1Q8IX07 1006 aa18.52■□□□□ 0.56
CHTOP-203ENST00000368690 PCDHB18PQ96TA0 734 aa18.52■□□□□ 0.56
CHTOP-203ENST00000368690 SYT15Q9BQS2 421 aa18.52■□□□□ 0.56
CHTOP-203ENST00000368690 KCND2Q9NZV8 630 aa18.52■□□□□ 0.56
CHTOP-203ENST00000368690 NOCTQ9UK39 431 aaKnown RBP18.52■□□□□ 0.56
CHTOP-203ENST00000368690 PSME4Q14997 1843 aa18.52■□□□□ 0.56
CHTOP-203ENST00000368690 ZNF536O15090 1300 aa18.52■□□□□ 0.56
CHTOP-203ENST00000368690 CLDN3O15551 220 aa18.52■□□□□ 0.56
CHTOP-203ENST00000368690 CHRNB2P17787 502 aa18.52■□□□□ 0.56
CHTOP-203ENST00000368690 CENPCQ03188 943 aa18.52■□□□□ 0.56
CHTOP-203ENST00000368690 DLGAP5Q15398 846 aa18.52■□□□□ 0.56
CHTOP-203ENST00000368690 TRABD2AQ86V40 505 aa18.52■□□□□ 0.56
CHTOP-203ENST00000368690 DHX37Q8IY37 1157 aaKnown RBP18.52■□□□□ 0.56
CHTOP-203ENST00000368690 SLC17A8Q8NDX2 589 aa18.52■□□□□ 0.56
CHTOP-203ENST00000368690 ATL2Q8NHH9 583 aa18.52■□□□□ 0.56
CHTOP-203ENST00000368690 EPS8L1Q8TE68 723 aa18.52■□□□□ 0.56
CHTOP-203ENST00000368690 C10orf82Q8WW14 230 aa18.52■□□□□ 0.56
CHTOP-203ENST00000368690 ZNF333Q96JL9 665 aa18.52■□□□□ 0.56
CHTOP-203ENST00000368690 TRAPPC9Q96Q05 1148 aa18.52■□□□□ 0.56
CHTOP-203ENST00000368690 LRCH1Q9Y2L9 728 aa18.52■□□□□ 0.56
CHTOP-203ENST00000368690 CLRN2A0PK11 232 aa18.51■□□□□ 0.55
CHTOP-203ENST00000368690 EXOC3O60645 756 aa18.51■□□□□ 0.55
CHTOP-203ENST00000368690 RTN3O95197 1032 aaPredicted RBP18.51■□□□□ 0.55
CHTOP-203ENST00000368690 SP100P23497 879 aaPredicted RBP18.51■□□□□ 0.55
CHTOP-203ENST00000368690 MARK3P27448 753 aa18.51■□□□□ 0.55
CHTOP-203ENST00000368690 VHLP40337 213 aa18.51■□□□□ 0.55
CHTOP-203ENST00000368690 CYP2J2P51589 502 aa18.51■□□□□ 0.55
CHTOP-203ENST00000368690 OCRLQ01968 901 aa18.51■□□□□ 0.55
CHTOP-203ENST00000368690 COG2Q14746 738 aa18.51■□□□□ 0.55
CHTOP-203ENST00000368690 PDCD2Q16342 344 aaPredicted RBP18.51■□□□□ 0.55
CHTOP-203ENST00000368690 EPC2Q52LR7 807 aa18.51■□□□□ 0.55
CHTOP-203ENST00000368690 ZC2HC1CQ53FD0 456 aaPredicted RBP18.51■□□□□ 0.55
CHTOP-203ENST00000368690 FAM47EQ6ZV65 393 aa18.51■□□□□ 0.55
CHTOP-203ENST00000368690 FAM71AQ8IYT1 594 aa18.51■□□□□ 0.55
CHTOP-203ENST00000368690 C1orf54Q8WWF1 131 aa18.51■□□□□ 0.55
CHTOP-203ENST00000368690 DCLK3Q9C098 648 aa18.51■□□□□ 0.55
CHTOP-203ENST00000368690 BCAS3Q9H6U6 928 aa18.51■□□□□ 0.55
CHTOP-203ENST00000368690 PPCSQ9HAB8 311 aa18.51■□□□□ 0.55
CHTOP-203ENST00000368690 SERPINB13Q9UIV8 391 aa18.51■□□□□ 0.55
CHTOP-203ENST00000368690 NEU2Q9Y3R4 380 aa18.51■□□□□ 0.55
CHTOP-203ENST00000368690 NVLO15381 856 aaKnown RBP18.51■□□□□ 0.55
CHTOP-203ENST00000368690 EIF6P56537 245 aaKnown RBP18.51■□□□□ 0.55
CHTOP-203ENST00000368690 RNASELQ05823 741 aaKnown RBP18.51■□□□□ 0.55
CHTOP-203ENST00000368690 TMEM154Q6P9G4 183 aa18.51■□□□□ 0.55
CHTOP-203ENST00000368690 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.51■□□□□ 0.55
CHTOP-203ENST00000368690 IFT43Q96FT9 208 aa18.51■□□□□ 0.55
CHTOP-203ENST00000368690 HSD17B14Q9BPX1 270 aa18.51■□□□□ 0.55
CHTOP-203ENST00000368690 TUBB6Q9BUF5 446 aa18.51■□□□□ 0.55
CHTOP-203ENST00000368690 DENND2DQ9H6A0 471 aaPredicted RBP18.51■□□□□ 0.55
CHTOP-203ENST00000368690 CYLDQ9NQC7 956 aa18.51■□□□□ 0.55
CHTOP-203ENST00000368690 TMOD2Q9NZR1 351 aa18.51■□□□□ 0.55
CHTOP-203ENST00000368690 WDR35Q9P2L0 1181 aa18.51■□□□□ 0.55
CHTOP-203ENST00000368690 GJA3Q9Y6H8 435 aa18.51■□□□□ 0.55
CHTOP-203ENST00000368690 A0A1W2PRG0 241 aa18.5■□□□□ 0.55
CHTOP-203ENST00000368690 SPDYE5A6NIY4 337 aa18.5■□□□□ 0.55
CHTOP-203ENST00000368690 FOXO6A8MYZ6 492 aa18.5■□□□□ 0.55
CHTOP-203ENST00000368690 C2CD2LO14523 706 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms