RNA–Protein interactions for RNA: ENST00000366813.1

H3F3A-201, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-201ENST00000366813 FBXL7Q9UJT9 491 aa8.89□□□□□ -0.99
H3F3A-201ENST00000366813 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.89□□□□□ -0.99
H3F3A-201ENST00000366813 PKD1L2Q7Z442 2459 aa8.89□□□□□ -0.99
H3F3A-201ENST00000366813 CRTAMO95727 393 aa8.88□□□□□ -0.99
H3F3A-201ENST00000366813 INSRRP14616 1297 aa8.88□□□□□ -0.99
H3F3A-201ENST00000366813 THBS2P35442 1172 aa8.88□□□□□ -0.99
H3F3A-201ENST00000366813 IRX3P78415 501 aaPredicted RBP8.88□□□□□ -0.99
H3F3A-201ENST00000366813 LSAMPQ13449 338 aa8.88□□□□□ -0.99
H3F3A-201ENST00000366813 LRRC41Q15345 812 aa8.88□□□□□ -0.99
H3F3A-201ENST00000366813 TAF7LQ5H9L4 462 aa8.88□□□□□ -0.99
H3F3A-201ENST00000366813 MIB1Q86YT6 1006 aa8.88□□□□□ -0.99
H3F3A-201ENST00000366813 RIOX2Q8IUF8 465 aa8.88□□□□□ -0.99
H3F3A-201ENST00000366813 TBC1D22AQ8WUA7 517 aa8.88□□□□□ -0.99
H3F3A-201ENST00000366813 CERS4Q9HA82 394 aa8.88□□□□□ -0.99
H3F3A-201ENST00000366813 CHD8Q9HCK8 2581 aa8.88□□□□□ -0.99
H3F3A-201ENST00000366813 BRWD1Q9NSI6 2320 aa8.88□□□□□ -0.99
H3F3A-201ENST00000366813 PHIPQ8WWQ0 1821 aa8.87□□□□□ -0.99
H3F3A-201ENST00000366813 PI4KAP2A4QPH2 592 aa8.87□□□□□ -0.99
H3F3A-201ENST00000366813 ELL2O00472 640 aaPredicted RBP8.87□□□□□ -0.99
H3F3A-201ENST00000366813 FRAT2O75474 233 aaPredicted RBP8.87□□□□□ -0.99
H3F3A-201ENST00000366813 DDX58O95786 925 aaKnown RBP8.87□□□□□ -0.99
H3F3A-201ENST00000366813 TIMP1P01033 207 aa8.87□□□□□ -0.99
H3F3A-201ENST00000366813 CYBAP13498 195 aa8.87□□□□□ -0.99
H3F3A-201ENST00000366813 CSF2RAP15509 400 aa8.87□□□□□ -0.99
H3F3A-201ENST00000366813 NAT1P18440 290 aa8.87□□□□□ -0.99
H3F3A-201ENST00000366813 SDSP20132 328 aa8.87□□□□□ -0.99
H3F3A-201ENST00000366813 KRTAP10-2P60368 255 aa8.87□□□□□ -0.99
H3F3A-201ENST00000366813 HERVK_113P62684 666 aa8.87□□□□□ -0.99
H3F3A-201ENST00000366813 NKX3-2P78367 333 aa8.87□□□□□ -0.99
H3F3A-201ENST00000366813 GUCY1A3Q02108 690 aa8.87□□□□□ -0.99
H3F3A-201ENST00000366813 IFIT5Q13325 482 aaKnown RBP8.87□□□□□ -0.99
H3F3A-201ENST00000366813 KIZQ2M2Z5 673 aa8.87□□□□□ -0.99
H3F3A-201ENST00000366813 MCTP2Q6DN12 878 aa8.87□□□□□ -0.99
H3F3A-201ENST00000366813 MFSD5Q6N075 450 aa8.87□□□□□ -0.99
H3F3A-201ENST00000366813 PI4KAP1Q8N8J0 262 aa8.87□□□□□ -0.99
H3F3A-201ENST00000366813 MAGEB10Q96LZ2 347 aaPredicted RBP8.87□□□□□ -0.99
H3F3A-201ENST00000366813 PAGR1Q9BTK6 254 aa8.87□□□□□ -0.99
H3F3A-201ENST00000366813 PCDHA9Q9Y5H5 950 aa8.87□□□□□ -0.99
H3F3A-201ENST00000366813 TRANK1O15050 2925 aa8.87□□□□□ -0.99
H3F3A-201ENST00000366813 EPOPA6NHQ4 379 aa8.86□□□□□ -0.99
H3F3A-201ENST00000366813 ARVCFO00192 962 aa8.86□□□□□ -0.99
H3F3A-201ENST00000366813 DCXO43602 365 aa8.86□□□□□ -0.99
H3F3A-201ENST00000366813 DNAJC8O75937 253 aaPredicted RBP8.86□□□□□ -0.99
H3F3A-201ENST00000366813 RASGRP1O95267 797 aa8.86□□□□□ -0.99
H3F3A-201ENST00000366813 POU3F3P20264 500 aaPredicted RBP8.86□□□□□ -0.99
H3F3A-201ENST00000366813 STAT5AP42229 794 aa8.86□□□□□ -0.99
H3F3A-201ENST00000366813 PPIGQ13427 754 aaKnown RBP eCLIP8.86□□□□□ -0.99
H3F3A-201ENST00000366813 UBE4AQ14139 1066 aa8.86□□□□□ -0.99
H3F3A-201ENST00000366813 TM4SF20Q53R12 229 aa8.86□□□□□ -0.99
H3F3A-201ENST00000366813 PRAMEF19Q5SWL8 479 aa8.86□□□□□ -0.99
H3F3A-201ENST00000366813 LDHAL6AQ6ZMR3 332 aa8.86□□□□□ -0.99
H3F3A-201ENST00000366813 MTDHQ86UE4 582 aaKnown RBP8.86□□□□□ -0.99
H3F3A-201ENST00000366813 FAM126BQ8IXS8 530 aa8.86□□□□□ -0.99
H3F3A-201ENST00000366813 DHX37Q8IY37 1157 aaKnown RBP8.86□□□□□ -0.99
H3F3A-201ENST00000366813 Q8N1Y9 231 aa8.86□□□□□ -0.99
H3F3A-201ENST00000366813 MFSD3Q96ES6 412 aa8.86□□□□□ -0.99
H3F3A-201ENST00000366813 CDIP1Q9H305 208 aa8.86□□□□□ -0.99
H3F3A-201ENST00000366813 CNNM1Q9NRU3 951 aa8.86□□□□□ -0.99
H3F3A-201ENST00000366813 INTS7Q9NVH2 962 aaKnown RBP8.86□□□□□ -0.99
H3F3A-201ENST00000366813 PCDHA8Q9Y5H6 950 aa8.86□□□□□ -0.99
H3F3A-201ENST00000366813 X6R8D5 127 aa8.86□□□□□ -0.99
H3F3A-201ENST00000366813 TCRBV16S1A1N1A0A5B0 115 aa8.85□□□□□ -0.99
H3F3A-201ENST00000366813 DDTLA6NHG4 134 aaPredicted RBP8.85□□□□□ -0.99
H3F3A-201ENST00000366813 DDX3XO00571 662 aaKnown RBP eCLIP8.85□□□□□ -0.997e-22■■■■□ 23.9
H3F3A-201ENST00000366813 ITGB3P05106 788 aa8.85□□□□□ -0.99
H3F3A-201ENST00000366813 TMPOP42166 694 aaKnown RBP8.85□□□□□ -0.99
H3F3A-201ENST00000366813 RGS3P49796 1198 aa8.85□□□□□ -0.99
H3F3A-201ENST00000366813 NEXNQ0ZGT2 675 aa8.85□□□□□ -0.99
H3F3A-201ENST00000366813 GCKRQ14397 625 aa8.85□□□□□ -0.99
H3F3A-201ENST00000366813 FAM47AQ5JRC9 791 aa8.85□□□□□ -0.99
H3F3A-201ENST00000366813 WDR78Q5VTH9 848 aa8.85□□□□□ -0.99
H3F3A-201ENST00000366813 BORAQ6PGQ7 559 aa8.85□□□□□ -0.99
H3F3A-201ENST00000366813 CCDC174Q6PII3 467 aa8.85□□□□□ -0.99
H3F3A-201ENST00000366813 KSR2Q6VAB6 950 aa8.85□□□□□ -0.99
H3F3A-201ENST00000366813 ALG1Q9BT22 464 aa8.85□□□□□ -0.99
H3F3A-201ENST00000366813 MAGEC2Q9UBF1 373 aaPredicted RBP8.85□□□□□ -0.99
H3F3A-201ENST00000366813 PPARGC1AQ9UBK2 798 aaKnown RBP8.85□□□□□ -0.99
H3F3A-201ENST00000366813 MAST3O60307 1309 aa8.85□□□□□ -0.99
H3F3A-201ENST00000366813 RIF1Q5UIP0 2472 aaKnown RBP8.85□□□□□ -0.99
H3F3A-201ENST00000366813 A0A1B0GUL6 1792 aa8.85□□□□□ -0.99
H3F3A-201ENST00000366813 TRIOO75962 3097 aa8.85□□□□□ -0.99
H3F3A-201ENST00000366813 TPRP12270 2363 aaKnown RBP8.84□□□□□ -0.99
H3F3A-201ENST00000366813 MROH6A6NGR9 719 aa8.84□□□□□ -0.99
H3F3A-201ENST00000366813 H7BY64 318 aa8.84□□□□□ -0.99
H3F3A-201ENST00000366813 HGSO14964 777 aaPredicted RBP8.84□□□□□ -0.99
H3F3A-201ENST00000366813 SEPT4O43236 478 aa8.84□□□□□ -0.99
H3F3A-201ENST00000366813 IL9P15248 144 aa8.84□□□□□ -0.99
H3F3A-201ENST00000366813 ITGA1P56199 1179 aa8.84□□□□□ -0.99
H3F3A-201ENST00000366813 TCF15Q12870 199 aa8.84□□□□□ -0.99
H3F3A-201ENST00000366813 PAK1Q13153 545 aa8.84□□□□□ -0.99
H3F3A-201ENST00000366813 FAM26FQ5R3K3 315 aa8.84□□□□□ -0.99
H3F3A-201ENST00000366813 LGI4Q8N135 537 aa8.84□□□□□ -0.99
H3F3A-201ENST00000366813 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.84□□□□□ -0.99
H3F3A-201ENST00000366813 CLDND1Q9NY35 253 aa8.84□□□□□ -0.99
H3F3A-201ENST00000366813 TBX21Q9UL17 535 aa8.84□□□□□ -0.99
H3F3A-201ENST00000366813 PRKAB1Q9Y478 270 aa8.84□□□□□ -0.99
H3F3A-201ENST00000366813 ZNF521Q96K83 1311 aa8.84□□□□□ -0.99
H3F3A-201ENST00000366813 ZFHX4Q86UP3 3567 aa8.84□□□□□ -0.99
H3F3A-201ENST00000366813 SLC15A5A6NIM6 579 aa8.83□□□□□ -1
H3F3A-201ENST00000366813 ZNF536O15090 1300 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms