RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 TCF7P36402 384 aaPredicted RBP11.9□□□□□ -0.5
SSU72-202ENST00000359060 ZNF844Q08AG5 666 aa11.9□□□□□ -0.5
SSU72-202ENST00000359060 TMEM132BQ14DG7 1078 aa11.9□□□□□ -0.5
SSU72-202ENST00000359060 PTGISQ16647 500 aa11.9□□□□□ -0.5
SSU72-202ENST00000359060 DAB2IPQ5VWQ8 1189 aa11.9□□□□□ -0.5
SSU72-202ENST00000359060 ERVK-5Q9HDB9 667 aa11.9□□□□□ -0.5
SSU72-202ENST00000359060 MYH4Q9Y623 1939 aa11.9□□□□□ -0.5
SSU72-202ENST00000359060 DHX15O43143 795 aaKnown RBP11.9□□□□□ -0.5
SSU72-202ENST00000359060 ZNF862O60290 1169 aa11.9□□□□□ -0.5
SSU72-202ENST00000359060 GJB6O95452 261 aa11.9□□□□□ -0.5
SSU72-202ENST00000359060 YARSP54577 528 aaKnown RBP11.9□□□□□ -0.5
SSU72-202ENST00000359060 FMO1Q01740 532 aa11.9□□□□□ -0.5
SSU72-202ENST00000359060 CUL2Q13617 745 aa11.9□□□□□ -0.5
SSU72-202ENST00000359060 KYNUQ16719 465 aa11.9□□□□□ -0.5
SSU72-202ENST00000359060 WDR72Q3MJ13 1102 aa11.9□□□□□ -0.5
SSU72-202ENST00000359060 LLGL2Q6P1M3 1020 aa11.9□□□□□ -0.5
SSU72-202ENST00000359060 TRIM50Q86XT4 487 aa11.9□□□□□ -0.5
SSU72-202ENST00000359060 SRRM1Q8IYB3 904 aaKnown RBP11.9□□□□□ -0.5
SSU72-202ENST00000359060 FAM71AQ8IYT1 594 aa11.9□□□□□ -0.5
SSU72-202ENST00000359060 PRPF31Q8WWY3 499 aaKnown RBP11.9□□□□□ -0.5
SSU72-202ENST00000359060 ARHGEF2Q92974 986 aaKnown RBP11.9□□□□□ -0.5
SSU72-202ENST00000359060 SAYSD1Q9NPB0 183 aa11.9□□□□□ -0.5
SSU72-202ENST00000359060 RARAP10276 462 aa11.89□□□□□ -0.51
SSU72-202ENST00000359060 GTF2H1P32780 548 aa11.89□□□□□ -0.51
SSU72-202ENST00000359060 GPC3P51654 580 aa11.89□□□□□ -0.51
SSU72-202ENST00000359060 TGFB2P61812 414 aa11.89□□□□□ -0.51
SSU72-202ENST00000359060 MTM1Q13496 603 aa11.89□□□□□ -0.51
SSU72-202ENST00000359060 C11orf63Q6NUN7 778 aa11.89□□□□□ -0.51
SSU72-202ENST00000359060 BBOF1Q8ND07 529 aa11.89□□□□□ -0.51
SSU72-202ENST00000359060 SPIRE2Q8WWL2 714 aa11.89□□□□□ -0.51
SSU72-202ENST00000359060 SHC3Q92529 594 aa11.89□□□□□ -0.51
SSU72-202ENST00000359060 OSBPL8Q9BZF1 889 aa11.89□□□□□ -0.51
SSU72-202ENST00000359060 IQCGQ9H095 443 aaKnown RBP11.89□□□□□ -0.51
SSU72-202ENST00000359060 NEUROG2Q9H2A3 272 aa11.89□□□□□ -0.51
SSU72-202ENST00000359060 PABPC3Q9H361 631 aaKnown RBP11.89□□□□□ -0.51
SSU72-202ENST00000359060 GINM1Q9NU53 330 aa11.89□□□□□ -0.51
SSU72-202ENST00000359060 CYP39A1Q9NYL5 469 aa11.89□□□□□ -0.51
SSU72-202ENST00000359060 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.89□□□□□ -0.51
SSU72-202ENST00000359060 MYH11P35749 1972 aa11.89□□□□□ -0.51
SSU72-202ENST00000359060 CSDE1O75534 798 aaKnown RBP11.89□□□□□ -0.51
SSU72-202ENST00000359060 BRD2P25440 801 aaKnown RBP11.89□□□□□ -0.51
SSU72-202ENST00000359060 CDO1Q16878 200 aa11.89□□□□□ -0.51
SSU72-202ENST00000359060 IZUMO3Q5VZ72 239 aa11.89□□□□□ -0.51
SSU72-202ENST00000359060 RFX6Q8HWS3 928 aa11.89□□□□□ -0.51
SSU72-202ENST00000359060 ZC3H3Q8IXZ2 948 aaKnown RBP11.89□□□□□ -0.51
SSU72-202ENST00000359060 TCP11Q8WWU5 503 aa11.89□□□□□ -0.51
SSU72-202ENST00000359060 MCEEQ96PE7 176 aa11.89□□□□□ -0.51
SSU72-202ENST00000359060 JPH2Q9BR39 696 aaPredicted RBP11.89□□□□□ -0.51
SSU72-202ENST00000359060 ADPGKQ9BRR6 497 aa11.89□□□□□ -0.51
SSU72-202ENST00000359060 MTMR12Q9C0I1 747 aa11.89□□□□□ -0.51
SSU72-202ENST00000359060 NCANO14594 1321 aa11.89□□□□□ -0.51
SSU72-202ENST00000359060 EXOC1LA0A1B0GW35 172 aa11.89□□□□□ -0.51
SSU72-202ENST00000359060 MYBL1P10243 752 aa11.89□□□□□ -0.51
SSU72-202ENST00000359060 P4HA1P13674 534 aa11.89□□□□□ -0.51
SSU72-202ENST00000359060 TNFRSF8P28908 595 aa11.89□□□□□ -0.51
SSU72-202ENST00000359060 RPL21P46778 160 aaKnown RBP11.89□□□□□ -0.51
SSU72-202ENST00000359060 GTF2A1P52655 376 aaPredicted RBP11.89□□□□□ -0.51
SSU72-202ENST00000359060 LMNB2Q03252 620 aa11.89□□□□□ -0.51
SSU72-202ENST00000359060 BYSLQ13895 437 aaKnown RBP11.89□□□□□ -0.51
SSU72-202ENST00000359060 HHATQ5VTY9 493 aa11.89□□□□□ -0.51
SSU72-202ENST00000359060 ATL2Q8NHH9 583 aa11.89□□□□□ -0.51
SSU72-202ENST00000359060 NLRP7Q8WX94 980 aa11.89□□□□□ -0.51
SSU72-202ENST00000359060 FAM167AQ96KS9 214 aa11.89□□□□□ -0.51
SSU72-202ENST00000359060 HEXIM2Q96MH2 286 aaKnown RBP11.89□□□□□ -0.51
SSU72-202ENST00000359060 PIK3R2O00459 728 aa11.89□□□□□ -0.51
SSU72-202ENST00000359060 TXNP10599 105 aaKnown RBP11.89□□□□□ -0.51
SSU72-202ENST00000359060 CHN1P15882 459 aa11.89□□□□□ -0.51
SSU72-202ENST00000359060 NFIL3Q16649 462 aa11.89□□□□□ -0.51
SSU72-202ENST00000359060 CLEC16AQ2KHT3 1053 aa11.89□□□□□ -0.51
SSU72-202ENST00000359060 NUGGCQ68CJ6 796 aa11.89□□□□□ -0.51
SSU72-202ENST00000359060 TRIM72Q6ZMU5 477 aa11.89□□□□□ -0.51
SSU72-202ENST00000359060 PALM2Q8IXS6 379 aa11.89□□□□□ -0.51
SSU72-202ENST00000359060 EPS8L3Q8TE67 593 aaKnown RBP11.89□□□□□ -0.51
SSU72-202ENST00000359060 SNF8Q96H20 258 aa11.89□□□□□ -0.51
SSU72-202ENST00000359060 PARVAQ9NVD7 372 aa11.89□□□□□ -0.51
SSU72-202ENST00000359060 TJP3O95049 919 aa11.88□□□□□ -0.51
SSU72-202ENST00000359060 ATP2A2P16615 1042 aaKnown RBP11.88□□□□□ -0.51
SSU72-202ENST00000359060 NCKAP1LP55160 1127 aa11.88□□□□□ -0.51
SSU72-202ENST00000359060 ORC1Q13415 861 aa11.88□□□□□ -0.51
SSU72-202ENST00000359060 CEP128Q6ZU80 1094 aa11.88□□□□□ -0.51
SSU72-202ENST00000359060 SESTD1Q86VW0 696 aa11.88□□□□□ -0.51
SSU72-202ENST00000359060 CPNE8Q86YQ8 564 aa11.88□□□□□ -0.51
SSU72-202ENST00000359060 PRELID2Q8N945 189 aa11.88□□□□□ -0.51
SSU72-202ENST00000359060 C1orf131Q8NDD1 294 aaKnown RBP11.88□□□□□ -0.51
SSU72-202ENST00000359060 MYCBPAPQ8TBZ2 947 aa11.88□□□□□ -0.51
SSU72-202ENST00000359060 HSPH1Q92598 858 aa11.88□□□□□ -0.51
SSU72-202ENST00000359060 THOC1Q96FV9 657 aaKnown RBP11.88□□□□□ -0.51
SSU72-202ENST00000359060 NHSQ6T4R5 1651 aa11.88□□□□□ -0.51
SSU72-202ENST00000359060 KRT10P13645 584 aa11.88□□□□□ -0.51
SSU72-202ENST00000359060 SLC1A1P43005 524 aa11.88□□□□□ -0.51
SSU72-202ENST00000359060 GPS1Q13098 491 aa11.88□□□□□ -0.51
SSU72-202ENST00000359060 LY6KQ17RY6 165 aa11.88□□□□□ -0.51
SSU72-202ENST00000359060 CYP4A22Q5TCH4 519 aa11.88□□□□□ -0.51
SSU72-202ENST00000359060 OR6B2Q6IFH4 312 aa11.88□□□□□ -0.51
SSU72-202ENST00000359060 ZNF572Q7Z3I7 529 aaPredicted RBP11.88□□□□□ -0.51
SSU72-202ENST00000359060 CTAGE3PQ8IX95 158 aa11.88□□□□□ -0.51
SSU72-202ENST00000359060 SAMD3Q8N6K7 520 aa11.88□□□□□ -0.51
SSU72-202ENST00000359060 C7orf31Q8N865 590 aa11.88□□□□□ -0.51
SSU72-202ENST00000359060 TRIM7Q9C029 511 aa11.88□□□□□ -0.51
SSU72-202ENST00000359060 IP6K2Q9UHH9 426 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms