RNA–Protein interactions for RNA: ENST00000354848.5

CD46-203, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,233 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-203ENST00000354848 GPBP1Q86WP2 473 aa8.33□□□□□ -1.08
CD46-203ENST00000354848 SCUBE1Q8IWY4 988 aa8.33□□□□□ -1.08
CD46-203ENST00000354848 ARHGAP24Q8N264 748 aa8.33□□□□□ -1.08
CD46-203ENST00000354848 SYT2Q8N9I0 419 aaPredicted RBP8.33□□□□□ -1.08
CD46-203ENST00000354848 GJA10Q969M2 543 aa8.33□□□□□ -1.08
CD46-203ENST00000354848 TTC25Q96NG3 672 aa8.33□□□□□ -1.08
CD46-203ENST00000354848 LZTS2Q9BRK4 669 aa8.33□□□□□ -1.08
CD46-203ENST00000354848 NDUFA13Q9P0J0 144 aa8.33□□□□□ -1.08
CD46-203ENST00000354848 DNAJC12Q9UKB3 198 aa8.33□□□□□ -1.08
CD46-203ENST00000354848 ASAP1Q9ULH1 1129 aa8.33□□□□□ -1.08
CD46-203ENST00000354848 NUP98P52948 1817 aa8.33□□□□□ -1.08
CD46-203ENST00000354848 EXOC1LA0A1B0GW35 172 aa8.33□□□□□ -1.08
CD46-203ENST00000354848 VILLO15195 856 aa8.33□□□□□ -1.08
CD46-203ENST00000354848 CLDN3O15551 220 aa8.33□□□□□ -1.08
CD46-203ENST00000354848 CDK4P11802 303 aa8.33□□□□□ -1.08
CD46-203ENST00000354848 KRT15P19012 456 aa8.33□□□□□ -1.08
CD46-203ENST00000354848 VARSP26640 1264 aaKnown RBP8.33□□□□□ -1.08
CD46-203ENST00000354848 HOXD13P35453 343 aa8.33□□□□□ -1.08
CD46-203ENST00000354848 VPS41P49754 854 aa8.33□□□□□ -1.08
CD46-203ENST00000354848 GALK1P51570 392 aa8.33□□□□□ -1.08
CD46-203ENST00000354848 CAV1Q03135 178 aa8.33□□□□□ -1.08
CD46-203ENST00000354848 MED21Q13503 144 aa8.33□□□□□ -1.08
CD46-203ENST00000354848 PTK6Q13882 451 aa8.33□□□□□ -1.08
CD46-203ENST00000354848 RASA3Q14644 834 aa8.33□□□□□ -1.08
CD46-203ENST00000354848 KNOP1Q1ED39 458 aaKnown RBP8.33□□□□□ -1.08
CD46-203ENST00000354848 CYP4F22Q6NT55 531 aa8.33□□□□□ -1.08
CD46-203ENST00000354848 CCDC62Q6P9F0 684 aa8.33□□□□□ -1.08
CD46-203ENST00000354848 B3GNT6Q6ZMB0 384 aa8.33□□□□□ -1.08
CD46-203ENST00000354848 RIPOR1Q6ZS17 1223 aa8.33□□□□□ -1.08
CD46-203ENST00000354848 LRRC43Q8N309 656 aa8.33□□□□□ -1.08
CD46-203ENST00000354848 OR6Y1Q8NGX8 325 aa8.33□□□□□ -1.08
CD46-203ENST00000354848 SKA1Q96BD8 255 aa8.33□□□□□ -1.08
CD46-203ENST00000354848 PANX3Q96QZ0 392 aa8.33□□□□□ -1.08
CD46-203ENST00000354848 OSBPL8Q9BZF1 889 aa8.33□□□□□ -1.08
CD46-203ENST00000354848 CHST7Q9NS84 486 aa8.33□□□□□ -1.08
CD46-203ENST00000354848 DNAJB4Q9UDY4 337 aa8.33□□□□□ -1.08
CD46-203ENST00000354848 PPM1HQ9ULR3 514 aa8.33□□□□□ -1.08
CD46-203ENST00000354848 FRMPD4Q14CM0 1322 aa8.32□□□□□ -1.08
CD46-203ENST00000354848 GSTTP1A0A1W2PQM5 241 aa8.32□□□□□ -1.08
CD46-203ENST00000354848 KLRF2D3W0D1 207 aa8.32□□□□□ -1.08
CD46-203ENST00000354848 TULP1O00294 542 aaPredicted RBP8.32□□□□□ -1.08
CD46-203ENST00000354848 TYROBPO43914 113 aa8.32□□□□□ -1.08
CD46-203ENST00000354848 SORBS3O60504 671 aa8.32□□□□□ -1.08
CD46-203ENST00000354848 MAGEC1O60732 1142 aa8.32□□□□□ -1.08
CD46-203ENST00000354848 DNAJC6O75061 913 aa8.32□□□□□ -1.08
CD46-203ENST00000354848 PGM3O95394 542 aa8.32□□□□□ -1.08
CD46-203ENST00000354848 PLA2G4BP0C869 781 aa8.32□□□□□ -1.08
CD46-203ENST00000354848 CYP11B2P19099 503 aa8.32□□□□□ -1.08
CD46-203ENST00000354848 PIK3CAP42336 1068 aa8.32□□□□□ -1.08
CD46-203ENST00000354848 EMP3P54852 163 aa8.32□□□□□ -1.08
CD46-203ENST00000354848 PHEXP78562 749 aa8.32□□□□□ -1.08
CD46-203ENST00000354848 CYLC2Q14093 348 aaPredicted RBP8.32□□□□□ -1.08
CD46-203ENST00000354848 BTG3Q14201 252 aaPredicted RBP8.32□□□□□ -1.08
CD46-203ENST00000354848 KRT72Q14CN4 511 aa8.32□□□□□ -1.08
CD46-203ENST00000354848 RASSF3Q86WH2 238 aa8.32□□□□□ -1.08
CD46-203ENST00000354848 LRRC6Q86X45 466 aa8.32□□□□□ -1.08
CD46-203ENST00000354848 PDSS2Q86YH6 399 aa8.32□□□□□ -1.08
CD46-203ENST00000354848 TSPYL2Q9H2G4 693 aaPredicted RBP8.32□□□□□ -1.08
CD46-203ENST00000354848 ARHGEF4Q9NR80 690 aa8.32□□□□□ -1.08
CD46-203ENST00000354848 DDX18Q9NVP1 670 aaKnown RBP8.32□□□□□ -1.08
CD46-203ENST00000354848 BARX2Q9UMQ3 279 aaPredicted RBP8.32□□□□□ -1.08
CD46-203ENST00000354848 KIAA1024Q9UPX6 916 aa8.32□□□□□ -1.08
CD46-203ENST00000354848 WDR91A4D1P6 747 aa8.32□□□□□ -1.08
CD46-203ENST00000354848 USP17L3A6NCW0 530 aa8.32□□□□□ -1.08
CD46-203ENST00000354848 USP17L4A6NCW7 530 aa8.32□□□□□ -1.08
CD46-203ENST00000354848 POC1B-GALNT4F8VUJ3 575 aa8.32□□□□□ -1.08
CD46-203ENST00000354848 FTLP02792 175 aaPredicted RBP8.32□□□□□ -1.08
CD46-203ENST00000354848 ATF2P15336 505 aa8.32□□□□□ -1.08
CD46-203ENST00000354848 RRM1P23921 792 aa8.32□□□□□ -1.08
CD46-203ENST00000354848 GTF2H1P32780 548 aa8.32□□□□□ -1.08
CD46-203ENST00000354848 ADCY8P40145 1251 aa8.32□□□□□ -1.08
CD46-203ENST00000354848 CPA2P48052 419 aa8.32□□□□□ -1.08
CD46-203ENST00000354848 ARFIP2P53365 341 aa8.32□□□□□ -1.08
CD46-203ENST00000354848 ZBTB16Q05516 673 aa8.32□□□□□ -1.08
CD46-203ENST00000354848 SPTY2D1Q68D10 685 aaPredicted RBP8.32□□□□□ -1.08
CD46-203ENST00000354848 NCCRP1Q6ZVX7 275 aaPredicted RBP8.32□□□□□ -1.08
CD46-203ENST00000354848 USP17L1Q7RTZ2 530 aa8.32□□□□□ -1.08
CD46-203ENST00000354848 NET1Q7Z628 596 aaPredicted RBP8.32□□□□□ -1.08
CD46-203ENST00000354848 TTC7BQ86TV6 843 aa8.32□□□□□ -1.08
CD46-203ENST00000354848 ATG4AQ8WYN0 398 aa8.32□□□□□ -1.08
CD46-203ENST00000354848 USP29Q9HBJ7 922 aa8.32□□□□□ -1.08
CD46-203ENST00000354848 ZDHHC7Q9NXF8 308 aa8.32□□□□□ -1.08
CD46-203ENST00000354848 ROBO3Q96MS0 1386 aa8.32□□□□□ -1.08
CD46-203ENST00000354848 COL18A1P39060 1754 aa8.32□□□□□ -1.08
CD46-203ENST00000354848 A0A1W2PPM1 405 aa8.31□□□□□ -1.08
CD46-203ENST00000354848 ERVV-2B6SEH9 535 aa8.31□□□□□ -1.08
CD46-203ENST00000354848 CALUO43852 315 aaPredicted RBP8.31□□□□□ -1.08
CD46-203ENST00000354848 ZBED4O75132 1171 aa8.31□□□□□ -1.08
CD46-203ENST00000354848 NR3C1P04150 777 aa8.31□□□□□ -1.08
CD46-203ENST00000354848 KRT18P05783 430 aaKnown RBP8.31□□□□□ -1.08
CD46-203ENST00000354848 ABHD2P08910 425 aa8.31□□□□□ -1.08
CD46-203ENST00000354848 UQCRBP14927 111 aa8.31□□□□□ -1.08
CD46-203ENST00000354848 ZNF24P17028 368 aa8.31□□□□□ -1.08
CD46-203ENST00000354848 ACTR3P61158 418 aa8.31□□□□□ -1.08
CD46-203ENST00000354848 GPC5P78333 572 aa8.31□□□□□ -1.08
CD46-203ENST00000354848 GPSM2P81274 684 aa8.31□□□□□ -1.08
CD46-203ENST00000354848 CDK16Q00536 496 aa8.31□□□□□ -1.08
CD46-203ENST00000354848 ARSHQ5FYA8 562 aa8.31□□□□□ -1.08
CD46-203ENST00000354848 SH3D19Q5HYK7 790 aa8.31□□□□□ -1.08
CD46-203ENST00000354848 SYDE2Q5VT97 1194 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms