RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 ATP5DP30049 168 aa16.38■□□□□ 0.21
BRCC3-201ENST00000330045 PRKG1Q13976 671 aa16.38■□□□□ 0.21
BRCC3-201ENST00000330045 OTUD6AQ7L8S5 288 aa16.38■□□□□ 0.21
BRCC3-201ENST00000330045 SAMD3Q8N6K7 520 aa16.38■□□□□ 0.21
BRCC3-201ENST00000330045 CPA5Q8WXQ8 436 aa16.38■□□□□ 0.21
BRCC3-201ENST00000330045 PDCD2LQ9BRP1 358 aa16.38■□□□□ 0.21
BRCC3-201ENST00000330045 DCLK3Q9C098 648 aa16.38■□□□□ 0.21
BRCC3-201ENST00000330045 ZC3H11AO75152 810 aaKnown RBP eCLIP16.37■□□□□ 0.21
BRCC3-201ENST00000330045 DDNO94850 711 aaPredicted RBP16.37■□□□□ 0.21
BRCC3-201ENST00000330045 TTC4O95801 387 aa16.37■□□□□ 0.21
BRCC3-201ENST00000330045 GSTA1P08263 222 aa16.37■□□□□ 0.21
BRCC3-201ENST00000330045 RRM1P23921 792 aa16.37■□□□□ 0.21
BRCC3-201ENST00000330045 ITGA8P53708 1063 aa16.37■□□□□ 0.21
BRCC3-201ENST00000330045 SOX10P56693 466 aa16.37■□□□□ 0.21
BRCC3-201ENST00000330045 LRRC14Q15048 493 aa16.37■□□□□ 0.21
BRCC3-201ENST00000330045 TRIP13Q15645 432 aaPredicted RBP16.37■□□□□ 0.21
BRCC3-201ENST00000330045 TRPM8Q7Z2W7 1104 aa16.37■□□□□ 0.21
BRCC3-201ENST00000330045 LPAR1Q92633 364 aa16.37■□□□□ 0.21
BRCC3-201ENST00000330045 CEP170P1Q96L14 293 aa16.37■□□□□ 0.21
BRCC3-201ENST00000330045 C17orf75Q9HAS0 396 aa16.37■□□□□ 0.21
BRCC3-201ENST00000330045 SPON1Q9HCB6 807 aa16.37■□□□□ 0.21
BRCC3-201ENST00000330045 PXMP2Q9NR77 195 aa16.37■□□□□ 0.21
BRCC3-201ENST00000330045 C1orf112Q9NSG2 853 aa16.37■□□□□ 0.21
BRCC3-201ENST00000330045 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.37■□□□□ 0.21
BRCC3-201ENST00000330045 SLC12A4Q9UP95 1085 aa16.37■□□□□ 0.21
BRCC3-201ENST00000330045 TMEM120BA0PK00 339 aa16.37■□□□□ 0.21
BRCC3-201ENST00000330045 HNRNPDLO14979 420 aaKnown RBP16.37■□□□□ 0.21
BRCC3-201ENST00000330045 MYBL1P10243 752 aa16.37■□□□□ 0.21
BRCC3-201ENST00000330045 CAV1Q03135 178 aa16.37■□□□□ 0.21
BRCC3-201ENST00000330045 ARHGEF16Q5VV41 709 aa16.37■□□□□ 0.21
BRCC3-201ENST00000330045 PHLDB2Q86SQ0 1253 aa16.37■□□□□ 0.21
BRCC3-201ENST00000330045 ATL2Q8NHH9 583 aa16.37■□□□□ 0.21
BRCC3-201ENST00000330045 MGARPQ8TDB4 240 aa16.37■□□□□ 0.21
BRCC3-201ENST00000330045 TRIM11Q96F44 468 aa16.37■□□□□ 0.21
BRCC3-201ENST00000330045 FAM213AQ9BRX8 229 aa16.37■□□□□ 0.21
BRCC3-201ENST00000330045 HERPUD2Q9BSE4 406 aa16.37■□□□□ 0.21
BRCC3-201ENST00000330045 MOV10L1Q9BXT6 1211 aaKnown RBP16.37■□□□□ 0.21
BRCC3-201ENST00000330045 GGA3Q9NZ52 723 aa16.37■□□□□ 0.21
BRCC3-201ENST00000330045 PCDHB2Q9Y5E7 798 aa16.37■□□□□ 0.21
BRCC3-201ENST00000330045 PCDHA10Q9Y5I2 948 aa16.37■□□□□ 0.21
BRCC3-201ENST00000330045 MYPNQ86TC9 1320 aa16.36■□□□□ 0.21
BRCC3-201ENST00000330045 SNX3O60493 162 aa16.36■□□□□ 0.21
BRCC3-201ENST00000330045 ATF2P15336 505 aa16.36■□□□□ 0.21
BRCC3-201ENST00000330045 CREB1P16220 341 aa16.36■□□□□ 0.21
BRCC3-201ENST00000330045 KYNUQ16719 465 aa16.36■□□□□ 0.21
BRCC3-201ENST00000330045 ZNF677Q86XU0 584 aa16.36■□□□□ 0.21
BRCC3-201ENST00000330045 DDX27Q96GQ7 796 aaKnown RBP16.36■□□□□ 0.21
BRCC3-201ENST00000330045 TRAIPQ9BWF2 469 aa16.36■□□□□ 0.21
BRCC3-201ENST00000330045 DNAJC17Q9NVM6 304 aaKnown RBP16.36■□□□□ 0.21
BRCC3-201ENST00000330045 GPRC5DQ9NZD1 345 aa16.36■□□□□ 0.21
BRCC3-201ENST00000330045 ANAPC5Q9UJX4 755 aa16.36■□□□□ 0.21
BRCC3-201ENST00000330045 TPX2Q9ULW0 747 aaKnown RBP16.36■□□□□ 0.21
BRCC3-201ENST00000330045 YBX3P16989 372 aaKnown RBP eCLIP16.36■□□□□ 0.21
BRCC3-201ENST00000330045 GARTP22102 1010 aa16.36■□□□□ 0.21
BRCC3-201ENST00000330045 ADCY8P40145 1251 aa16.36■□□□□ 0.21
BRCC3-201ENST00000330045 TNFAIP1Q13829 316 aa16.36■□□□□ 0.21
BRCC3-201ENST00000330045 BRDTQ58F21 947 aaPredicted RBP16.36■□□□□ 0.21
BRCC3-201ENST00000330045 RDM1Q8NG50 284 aa16.36■□□□□ 0.21
BRCC3-201ENST00000330045 BICD1Q96G01 975 aa16.36■□□□□ 0.21
BRCC3-201ENST00000330045 SCLT1Q96NL6 688 aa16.36■□□□□ 0.21
BRCC3-201ENST00000330045 CTDP1Q9Y5B0 961 aaPredicted RBP16.36■□□□□ 0.21
BRCC3-201ENST00000330045 ADGRA3Q8IWK6 1321 aa16.35■□□□□ 0.21
BRCC3-201ENST00000330045 THAP12O43422 761 aa16.35■□□□□ 0.21
BRCC3-201ENST00000330045 MGRN1O60291 552 aa16.35■□□□□ 0.21
BRCC3-201ENST00000330045 NSFP46459 744 aaKnown RBP16.35■□□□□ 0.21
BRCC3-201ENST00000330045 GSCP56915 257 aaPredicted RBP16.35■□□□□ 0.21
BRCC3-201ENST00000330045 ENPEPQ07075 957 aa16.35■□□□□ 0.21
BRCC3-201ENST00000330045 MTMR2Q13614 643 aa16.35■□□□□ 0.21
BRCC3-201ENST00000330045 C2CD6Q53TS8 623 aa16.35■□□□□ 0.21
BRCC3-201ENST00000330045 VSTM1Q6UX27 236 aa16.35■□□□□ 0.21
BRCC3-201ENST00000330045 NLRX1Q86UT6 975 aa16.35■□□□□ 0.21
BRCC3-201ENST00000330045 FAM228AQ86W67 206 aa16.35■□□□□ 0.21
BRCC3-201ENST00000330045 ZNF516Q92618 1163 aa16.35■□□□□ 0.21
BRCC3-201ENST00000330045 FAM84AQ96KN4 292 aa16.35■□□□□ 0.21
BRCC3-201ENST00000330045 NCAPGQ9BPX3 1015 aa16.35■□□□□ 0.21
BRCC3-201ENST00000330045 KCNK9Q9NPC2 374 aa16.35■□□□□ 0.21
BRCC3-201ENST00000330045 GABBR1Q9UBS5 961 aa16.35■□□□□ 0.21
BRCC3-201ENST00000330045 CTNNAL1Q9UBT7 734 aa16.35■□□□□ 0.21
BRCC3-201ENST00000330045 R3HDM2Q9Y2K5 976 aaKnown RBP16.35■□□□□ 0.21
BRCC3-201ENST00000330045 WDR81Q562E7 1941 aa16.35■□□□□ 0.21
BRCC3-201ENST00000330045 TCP11X1B4DZS4 312 aa16.35■□□□□ 0.21
BRCC3-201ENST00000330045 BPIFB4P59827 614 aa16.35■□□□□ 0.21
BRCC3-201ENST00000330045 ELF3P78545 371 aaPredicted RBP16.35■□□□□ 0.21
BRCC3-201ENST00000330045 CENPCQ03188 943 aa16.35■□□□□ 0.21
BRCC3-201ENST00000330045 WDR44Q5JSH3 913 aa16.35■□□□□ 0.21
BRCC3-201ENST00000330045 HIBCHQ6NVY1 386 aaPredicted RBP16.35■□□□□ 0.21
BRCC3-201ENST00000330045 LLGL2Q6P1M3 1020 aa16.35■□□□□ 0.21
BRCC3-201ENST00000330045 C15orf39Q6ZRI6 1047 aa16.35■□□□□ 0.21
BRCC3-201ENST00000330045 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.35■□□□□ 0.21
BRCC3-201ENST00000330045 HEMGNQ9BXL5 484 aa16.35■□□□□ 0.21
BRCC3-201ENST00000330045 ZNF862O60290 1169 aa16.34■□□□□ 0.21
BRCC3-201ENST00000330045 SORBS3O60504 671 aa16.34■□□□□ 0.21
BRCC3-201ENST00000330045 PROSCO94903 275 aa16.34■□□□□ 0.21
BRCC3-201ENST00000330045 RALAP11233 206 aa16.34■□□□□ 0.21
BRCC3-201ENST00000330045 VPS41P49754 854 aa16.34■□□□□ 0.21
BRCC3-201ENST00000330045 PTP4A2Q12974 167 aa16.34■□□□□ 0.21
BRCC3-201ENST00000330045 FAM133BQ5BKY9 247 aaKnown RBP16.34■□□□□ 0.21
BRCC3-201ENST00000330045 CCDC63Q8NA47 563 aa16.34■□□□□ 0.21
BRCC3-201ENST00000330045 MAGEC3Q8TD91 643 aa16.34■□□□□ 0.21
BRCC3-201ENST00000330045 WNK4Q96J92 1243 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms