RNA–Protein interactions for RNA: ENST00000303296.8

HIPK3-201, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 5 BASIC

Gene HIPK3, Length 7,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-201ENST00000303296 NFKBIZQ9BYH8 718 aa14.92□□□□□ -0.02
HIPK3-201ENST00000303296 SERHL2Q9H4I8 314 aa14.92□□□□□ -0.02
HIPK3-201ENST00000303296 SERHLQ9NQF3 203 aa14.92□□□□□ -0.02
HIPK3-201ENST00000303296 ZBTB40Q9NUA8 1239 aa14.92□□□□□ -0.02
HIPK3-201ENST00000303296 RALGAPBQ86X10 1494 aa14.92□□□□□ -0.02
HIPK3-201ENST00000303296 TSPAN9O75954 239 aa14.92□□□□□ -0.02
HIPK3-201ENST00000303296 GPC5P78333 572 aa14.92□□□□□ -0.02
HIPK3-201ENST00000303296 CDK17Q00537 523 aa14.92□□□□□ -0.02
HIPK3-201ENST00000303296 PTH1RQ03431 593 aa14.92□□□□□ -0.02
HIPK3-201ENST00000303296 GFPT1Q06210 699 aaPredicted RBP14.92□□□□□ -0.02
HIPK3-201ENST00000303296 ZNF512Q96ME7 567 aaPredicted RBP14.92□□□□□ -0.02
HIPK3-201ENST00000303296 DDX56Q9NY93 547 aaKnown RBP14.92□□□□□ -0.02
HIPK3-201ENST00000303296 SLC16A4O15374 487 aa14.92□□□□□ -0.02
HIPK3-201ENST00000303296 CLASP2O75122 1294 aaKnown RBP14.92□□□□□ -0.02
HIPK3-201ENST00000303296 ACTR2P61160 394 aa14.92□□□□□ -0.02
HIPK3-201ENST00000303296 CYLC2Q14093 348 aaPredicted RBP14.92□□□□□ -0.02
HIPK3-201ENST00000303296 USP10Q14694 798 aaKnown RBP14.92□□□□□ -0.02
HIPK3-201ENST00000303296 RHOT2Q8IXI1 618 aa14.92□□□□□ -0.02
HIPK3-201ENST00000303296 PARP9Q8IXQ6 854 aa14.92□□□□□ -0.02
HIPK3-201ENST00000303296 ZNF564Q8TBZ8 553 aaPredicted RBP14.92□□□□□ -0.02
HIPK3-201ENST00000303296 CYP39A1Q9NYL5 469 aa14.92□□□□□ -0.02
HIPK3-201ENST00000303296 CDYLQ9Y232 598 aa14.92□□□□□ -0.02
HIPK3-201ENST00000303296 ABCB11O95342 1321 aa14.92□□□□□ -0.02
HIPK3-201ENST00000303296 EIF3EP60228 445 aaKnown RBP14.92□□□□□ -0.02
HIPK3-201ENST00000303296 CAMK1Q14012 370 aa14.92□□□□□ -0.02
HIPK3-201ENST00000303296 TAF5Q15542 800 aa14.92□□□□□ -0.02
HIPK3-201ENST00000303296 TAF13Q15543 124 aa14.92□□□□□ -0.02
HIPK3-201ENST00000303296 ULK3Q6PHR2 472 aa14.92□□□□□ -0.02
HIPK3-201ENST00000303296 PADI4Q9UM07 663 aa14.92□□□□□ -0.02
HIPK3-201ENST00000303296 CHURC1-FNTBB4DL54 471 aa14.92□□□□□ -0.02
HIPK3-201ENST00000303296 H2AFYO75367 372 aaKnown RBP14.92□□□□□ -0.02
HIPK3-201ENST00000303296 SRP72O76094 671 aaKnown RBP14.92□□□□□ -0.02
HIPK3-201ENST00000303296 SNUPNO95149 360 aaKnown RBP14.92□□□□□ -0.02
HIPK3-201ENST00000303296 CHRM3P20309 590 aa14.92□□□□□ -0.02
HIPK3-201ENST00000303296 TRIM16LQ309B1 348 aa14.92□□□□□ -0.02
HIPK3-201ENST00000303296 MMP19Q99542 508 aa14.92□□□□□ -0.02
HIPK3-201ENST00000303296 RAVER2Q9HCJ3 691 aaKnown RBP14.92□□□□□ -0.02
HIPK3-201ENST00000303296 TCP11X1B4DZS4 312 aa14.91□□□□□ -0.02
HIPK3-201ENST00000303296 SMNDC1O75940 238 aaKnown RBP eCLIP14.91□□□□□ -0.02
HIPK3-201ENST00000303296 USP1O94782 785 aa14.91□□□□□ -0.02
HIPK3-201ENST00000303296 ALBP02768 609 aa14.91□□□□□ -0.02
HIPK3-201ENST00000303296 TNNI3P19429 210 aa14.91□□□□□ -0.02
HIPK3-201ENST00000303296 FGFR4P22455 802 aa14.91□□□□□ -0.02
HIPK3-201ENST00000303296 KRT74Q7RTS7 529 aa14.91□□□□□ -0.02
HIPK3-201ENST00000303296 EPHX4Q8IUS5 362 aa14.91□□□□□ -0.02
HIPK3-201ENST00000303296 FAM45AQ8TCE6 357 aa14.91□□□□□ -0.02
HIPK3-201ENST00000303296 SLC9A7Q96T83 725 aa14.91□□□□□ -0.02
HIPK3-201ENST00000303296 FAM129BQ96TA1 746 aa14.91□□□□□ -0.02
HIPK3-201ENST00000303296 BHMT2Q9H2M3 363 aa14.91□□□□□ -0.02
HIPK3-201ENST00000303296 CLEC4MQ9H2X3 399 aaPredicted RBP14.91□□□□□ -0.02
HIPK3-201ENST00000303296 ERAP1Q9NZ08 941 aa14.91□□□□□ -0.02
HIPK3-201ENST00000303296 SNX8Q9Y5X2 465 aa14.91□□□□□ -0.02
HIPK3-201ENST00000303296 SPACA6W5XKT8 324 aa14.91□□□□□ -0.02
HIPK3-201ENST00000303296 MYO10Q9HD67 2058 aa14.91□□□□□ -0.02
HIPK3-201ENST00000303296 MYBL1P10243 752 aa14.91□□□□□ -0.02
HIPK3-201ENST00000303296 AKAP5P24588 427 aa14.91□□□□□ -0.02
HIPK3-201ENST00000303296 PPP4R3CPQ6ZMV5 832 aa14.91□□□□□ -0.02
HIPK3-201ENST00000303296 ASXL1Q8IXJ9 1541 aa14.91□□□□□ -0.02
HIPK3-201ENST00000303296 PCNAP12004 261 aa14.91□□□□□ -0.02
HIPK3-201ENST00000303296 THUMPD3Q9BV44 507 aaKnown RBP14.91□□□□□ -0.02
HIPK3-201ENST00000303296 IP6K2Q9UHH9 426 aa14.91□□□□□ -0.02
HIPK3-201ENST00000303296 SMARCA4P51532 1647 aa14.91□□□□□ -0.02
HIPK3-201ENST00000303296 ARMCX4Q5H9R4 360 aa14.91□□□□□ -0.02
HIPK3-201ENST00000303296 CCDC17Q96LX7 622 aa14.91□□□□□ -0.02
HIPK3-201ENST00000303296 PIF1Q9H611 641 aa14.91□□□□□ -0.02
HIPK3-201ENST00000303296 SENP2Q9HC62 589 aa14.91□□□□□ -0.02
HIPK3-201ENST00000303296 SRPRBQ9Y5M8 271 aaKnown RBP14.91□□□□□ -0.02
HIPK3-201ENST00000303296 ADCY9O60503 1353 aa14.91□□□□□ -0.02
HIPK3-201ENST00000303296 PTPN7P35236 360 aa14.91□□□□□ -0.02
HIPK3-201ENST00000303296 HIST2H2ACQ16777 129 aaPredicted RBP14.91□□□□□ -0.02
HIPK3-201ENST00000303296 DPCR1Q3MIW9 517 aa14.91□□□□□ -0.02
HIPK3-201ENST00000303296 MGAT5BQ3V5L5 792 aa14.91□□□□□ -0.02
HIPK3-201ENST00000303296 HIST2H2AA3Q6FI13 130 aa14.91□□□□□ -0.02
HIPK3-201ENST00000303296 CLYBLQ8N0X4 340 aa14.91□□□□□ -0.02
HIPK3-201ENST00000303296 ATPAF2Q8N5M1 289 aa14.91□□□□□ -0.02
HIPK3-201ENST00000303296 TRIM39Q9HCM9 518 aa14.91□□□□□ -0.02
HIPK3-201ENST00000303296 PPP2R3BQ9Y5P8 575 aa14.91□□□□□ -0.02
HIPK3-201ENST00000303296 SCAF11Q99590 1463 aaKnown RBP14.91□□□□□ -0.02
HIPK3-201ENST00000303296 ABCC1P33527 1531 aa14.91□□□□□ -0.02
HIPK3-201ENST00000303296 SMIM31A0A1B0GVY4 71 aa14.91□□□□□ -0.02
HIPK3-201ENST00000303296 MYL2P10916 166 aa14.91□□□□□ -0.02
HIPK3-201ENST00000303296 RRM2P31350 389 aa14.91□□□□□ -0.02
HIPK3-201ENST00000303296 DSG3P32926 999 aa14.91□□□□□ -0.02
HIPK3-201ENST00000303296 LONP2Q86WA8 852 aa14.91□□□□□ -0.02
HIPK3-201ENST00000303296 AP3D1O14617 1153 aa14.9□□□□□ -0.02
HIPK3-201ENST00000303296 ERN1O75460 977 aaKnown RBP14.9□□□□□ -0.02
HIPK3-201ENST00000303296 GGCXP38435 758 aa14.9□□□□□ -0.02
HIPK3-201ENST00000303296 MKRN4PQ13434 485 aaPredicted RBP14.9□□□□□ -0.02
HIPK3-201ENST00000303296 SFR1Q86XK3 245 aa14.9□□□□□ -0.02
HIPK3-201ENST00000303296 PCYOX1LQ8NBM8 494 aa14.9□□□□□ -0.02
HIPK3-201ENST00000303296 S100A13Q99584 98 aa14.9□□□□□ -0.02
HIPK3-201ENST00000303296 TUFT1Q9NNX1 390 aa14.9□□□□□ -0.02
HIPK3-201ENST00000303296 KCNH4Q9UQ05 1017 aa14.9□□□□□ -0.02
HIPK3-201ENST00000303296 GMNCA6NCL1 334 aa14.9□□□□□ -0.02
HIPK3-201ENST00000303296 UBTFL6P0CB48 400 aaPredicted RBP14.9□□□□□ -0.02
HIPK3-201ENST00000303296 TRADDQ15628 312 aa14.9□□□□□ -0.02
HIPK3-201ENST00000303296 ATAD3BQ5T9A4 648 aa14.9□□□□□ -0.02
HIPK3-201ENST00000303296 ERLEC1Q96DZ1 483 aa14.9□□□□□ -0.02
HIPK3-201ENST00000303296 TRIM49P0CI25 452 aa14.9□□□□□ -0.02
HIPK3-201ENST00000303296 TRIM49CP0CI26 452 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms