RNA–Protein interactions for RNA: ENST00000266079.4

PRPF6-201, Transcript of pre-mRNA processing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF6, Length 3,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF6-201ENST00000266079 MYH11P35749 1972 aa13.54□□□□□ -0.24
PRPF6-201ENST00000266079 PALMO75781 387 aa13.54□□□□□ -0.24
PRPF6-201ENST00000266079 GAP43P17677 238 aa13.54□□□□□ -0.24
PRPF6-201ENST00000266079 ECHS1P30084 290 aa13.54□□□□□ -0.24
PRPF6-201ENST00000266079 CTNNA1P35221 906 aaKnown RBP13.54□□□□□ -0.24
PRPF6-201ENST00000266079 HOXD13P35453 343 aa13.54□□□□□ -0.24
PRPF6-201ENST00000266079 DNA2P51530 1060 aa13.54□□□□□ -0.24
PRPF6-201ENST00000266079 MKRN4PQ13434 485 aaPredicted RBP13.54□□□□□ -0.24
PRPF6-201ENST00000266079 GRIK4Q16099 956 aa13.54□□□□□ -0.24
PRPF6-201ENST00000266079 CRELD2Q6UXH1 353 aaPredicted RBP13.54□□□□□ -0.24
PRPF6-201ENST00000266079 ZNF720Q7Z2F6 126 aa13.54□□□□□ -0.24
PRPF6-201ENST00000266079 HAUS6Q7Z4H7 955 aa13.54□□□□□ -0.24
PRPF6-201ENST00000266079 KCTD17Q8N5Z5 321 aa13.54□□□□□ -0.24
PRPF6-201ENST00000266079 ARMC2Q8NEN0 867 aa13.54□□□□□ -0.24
PRPF6-201ENST00000266079 TBC1D31Q96DN5 1066 aa13.54□□□□□ -0.24
PRPF6-201ENST00000266079 MMRN2Q9H8L6 949 aa13.54□□□□□ -0.24
PRPF6-201ENST00000266079 KCND2Q9NZV8 630 aa13.54□□□□□ -0.24
PRPF6-201ENST00000266079 AKT3Q9Y243 479 aa13.54□□□□□ -0.24
PRPF6-201ENST00000266079 SSU72P8A0A1W2PR75 194 aa13.53□□□□□ -0.24
PRPF6-201ENST00000266079 DENND3A2RUS2 1198 aa13.53□□□□□ -0.24
PRPF6-201ENST00000266079 BUB1BO60566 1050 aaPredicted RBP13.53□□□□□ -0.24
PRPF6-201ENST00000266079 GLRA2P23416 452 aa13.53□□□□□ -0.24
PRPF6-201ENST00000266079 ZNF131P52739 623 aa13.53□□□□□ -0.24
PRPF6-201ENST00000266079 CUL1Q13616 776 aa13.53□□□□□ -0.24
PRPF6-201ENST00000266079 HIC1Q14526 733 aa13.53□□□□□ -0.24
PRPF6-201ENST00000266079 MFSD10Q14728 455 aa13.53□□□□□ -0.24
PRPF6-201ENST00000266079 ARHGEF6Q15052 776 aa13.53□□□□□ -0.24
PRPF6-201ENST00000266079 PPP1R7Q15435 360 aa13.53□□□□□ -0.24
PRPF6-201ENST00000266079 KCNA10Q16322 511 aa13.53□□□□□ -0.24
PRPF6-201ENST00000266079 VWA3BQ502W6 1294 aa13.53□□□□□ -0.24
PRPF6-201ENST00000266079 GUF1Q8N442 669 aaKnown RBP13.53□□□□□ -0.24
PRPF6-201ENST00000266079 LMBR1Q8WVP7 490 aa13.53□□□□□ -0.24
PRPF6-201ENST00000266079 KAT6AQ92794 2004 aa13.53□□□□□ -0.24
PRPF6-201ENST00000266079 CCT8L1PA6NM43 557 aa13.53□□□□□ -0.24
PRPF6-201ENST00000266079 SKAP2O75563 359 aaPredicted RBP13.53□□□□□ -0.24
PRPF6-201ENST00000266079 FTCDO95954 541 aa13.53□□□□□ -0.24
PRPF6-201ENST00000266079 ASGR1P07306 291 aa13.53□□□□□ -0.24
PRPF6-201ENST00000266079 SMIM10L2AP0DMW4 78 aa13.53□□□□□ -0.24
PRPF6-201ENST00000266079 SMIM10L2BP0DMW5 78 aa13.53□□□□□ -0.24
PRPF6-201ENST00000266079 PPP1R2P41236 205 aa13.53□□□□□ -0.24
PRPF6-201ENST00000266079 PSMD2Q13200 908 aa13.53□□□□□ -0.24
PRPF6-201ENST00000266079 SLC9C1Q4G0N8 1177 aa13.53□□□□□ -0.24
PRPF6-201ENST00000266079 GPIHBP1Q8IV16 184 aa13.53□□□□□ -0.24
PRPF6-201ENST00000266079 KLHL7Q8IXQ5 586 aa13.53□□□□□ -0.24
PRPF6-201ENST00000266079 USP38Q8NB14 1042 aa13.53□□□□□ -0.24
PRPF6-201ENST00000266079 RDH13Q8NBN7 331 aa13.53□□□□□ -0.24
PRPF6-201ENST00000266079 RNF149Q8NC42 400 aa13.53□□□□□ -0.24
PRPF6-201ENST00000266079 NSMCE1Q8WV22 266 aa13.53□□□□□ -0.24
PRPF6-201ENST00000266079 BAP1Q92560 729 aa13.53□□□□□ -0.24
PRPF6-201ENST00000266079 STAMBPL1Q96FJ0 436 aa13.53□□□□□ -0.24
PRPF6-201ENST00000266079 IFT74Q96LB3 600 aa13.53□□□□□ -0.24
PRPF6-201ENST00000266079 UNC93B1Q9H1C4 597 aa13.53□□□□□ -0.24
PRPF6-201ENST00000266079 NDST4Q9H3R1 872 aa13.53□□□□□ -0.24
PRPF6-201ENST00000266079 PCIF1Q9H4Z3 704 aa13.53□□□□□ -0.24
PRPF6-201ENST00000266079 PDLIM7Q9NR12 457 aa13.53□□□□□ -0.24
PRPF6-201ENST00000266079 SUCLA2Q9P2R7 463 aaPredicted RBP13.53□□□□□ -0.24
PRPF6-201ENST00000266079 NOVA2Q9UNW9 492 aaKnown RBP13.53□□□□□ -0.24
PRPF6-201ENST00000266079 MAFO75444 373 aaPredicted RBP13.53□□□□□ -0.24
PRPF6-201ENST00000266079 F2P00734 622 aa13.53□□□□□ -0.24
PRPF6-201ENST00000266079 PSEN2P49810 448 aa13.53□□□□□ -0.24
PRPF6-201ENST00000266079 SARNPP82979 210 aaKnown RBP13.53□□□□□ -0.24
PRPF6-201ENST00000266079 PURAQ00577 322 aaKnown RBP13.53□□□□□ -0.24
PRPF6-201ENST00000266079 RIPK1Q13546 671 aa13.53□□□□□ -0.24
PRPF6-201ENST00000266079 MEI1Q5TIA1 1274 aa13.53□□□□□ -0.24
PRPF6-201ENST00000266079 HMX1Q9NP08 348 aaPredicted RBP13.53□□□□□ -0.24
PRPF6-201ENST00000266079 OLFML3Q9NRN5 406 aa13.53□□□□□ -0.24
PRPF6-201ENST00000266079 TMEM59LQ9UK28 342 aa13.53□□□□□ -0.24
PRPF6-201ENST00000266079 SLC26A2P50443 739 aa13.52□□□□□ -0.24
PRPF6-201ENST00000266079 RNASE9P60153 205 aaKnown RBP13.52□□□□□ -0.24
PRPF6-201ENST00000266079 MYO1EQ12965 1108 aa13.52□□□□□ -0.24
PRPF6-201ENST00000266079 PDXDC1Q6P996 788 aa13.52□□□□□ -0.24
PRPF6-201ENST00000266079 CDR2LQ86X02 465 aaPredicted RBP13.52□□□□□ -0.24
PRPF6-201ENST00000266079 ZNF483Q8TF39 744 aaPredicted RBP13.52□□□□□ -0.24
PRPF6-201ENST00000266079 KIFAP3Q92845 792 aa13.52□□□□□ -0.24
PRPF6-201ENST00000266079 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.52□□□□□ -0.24
PRPF6-201ENST00000266079 TREHO43280 583 aa13.52□□□□□ -0.25
PRPF6-201ENST00000266079 C22orf31O95567 290 aa13.52□□□□□ -0.25
PRPF6-201ENST00000266079 GSTA1P08263 222 aa13.52□□□□□ -0.25
PRPF6-201ENST00000266079 GCKP35557 465 aa13.52□□□□□ -0.25
PRPF6-201ENST00000266079 CYP2J2P51589 502 aa13.52□□□□□ -0.25
PRPF6-201ENST00000266079 MTMR3Q13615 1198 aa13.52□□□□□ -0.25
PRPF6-201ENST00000266079 CAPSQ13938 189 aa13.52□□□□□ -0.25
PRPF6-201ENST00000266079 KNOP1Q1ED39 458 aaKnown RBP13.52□□□□□ -0.25
PRPF6-201ENST00000266079 C7orf31Q8N865 590 aa13.52□□□□□ -0.25
PRPF6-201ENST00000266079 CCDC63Q8NA47 563 aa13.52□□□□□ -0.25
PRPF6-201ENST00000266079 CCDC197Q8NCU1 140 aa13.52□□□□□ -0.25
PRPF6-201ENST00000266079 SLAIN1Q8ND83 568 aa13.52□□□□□ -0.25
PRPF6-201ENST00000266079 DEPTORQ8TB45 409 aa13.52□□□□□ -0.25
PRPF6-201ENST00000266079 PXYLP1Q8TE99 480 aa13.52□□□□□ -0.25
PRPF6-201ENST00000266079 C15orf41Q9Y2V0 281 aa13.52□□□□□ -0.25
PRPF6-201ENST00000266079 ADAMTS4O75173 837 aa13.51□□□□□ -0.25
PRPF6-201ENST00000266079 HARSP12081 509 aaKnown RBP13.51□□□□□ -0.25
PRPF6-201ENST00000266079 GJA9P57773 515 aa13.51□□□□□ -0.25
PRPF6-201ENST00000266079 NAB2Q15742 525 aa13.51□□□□□ -0.25
PRPF6-201ENST00000266079 HGSNATQ68CP4 663 aa13.51□□□□□ -0.25
PRPF6-201ENST00000266079 CCHCR1Q8TD31 782 aa13.51□□□□□ -0.25
PRPF6-201ENST00000266079 PSPC1Q8WXF1 523 aaKnown RBP13.51□□□□□ -0.25
PRPF6-201ENST00000266079 THOC1Q96FV9 657 aaKnown RBP13.51□□□□□ -0.25
PRPF6-201ENST00000266079 CHMP6Q96FZ7 201 aa13.51□□□□□ -0.25
PRPF6-201ENST00000266079 BICD1Q96G01 975 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms