RNA–Protein interactions for RNA: YPR111W

DBF20, Transcript of Ser/Thr kinase involved in late nuclear division, yeast

Gene DBF20, Length 1,695 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBF20	YPR111W	SFC1	P33303	322 aa		2.19	□□□□□ -2.06
DBF20	YPR111W	YCR087C-A	P37263	153 aa		2.19	□□□□□ -2.06
DBF20	YPR111W	SSH1	P38353	490 aa	Known RBP	2.19	□□□□□ -2.06
DBF20	YPR111W	ARN2	P38724	620 aa		2.19	□□□□□ -2.06
DBF20	YPR111W	TRM5	P38793	499 aa		2.19	□□□□□ -2.06
DBF20	YPR111W	BDH1	P39714	382 aa		2.19	□□□□□ -2.06
DBF20	YPR111W	FAR7	P43592	221 aa		2.19	□□□□□ -2.06
DBF20	YPR111W	NIF3	P53081	288 aa		2.19	□□□□□ -2.06
DBF20	YPR111W	FLC3	P53121	802 aa		2.19	□□□□□ -2.06
DBF20	YPR111W	TOS8	P53147	276 aa		2.19	□□□□□ -2.06
DBF20	YPR111W	NOP19	P53317	196 aa	Predicted RBP	2.19	□□□□□ -2.06
DBF20	YPR111W	PDR17	P53844	350 aa		2.19	□□□□□ -2.06
DBF20	YPR111W	ABF2	Q02486	183 aa		2.19	□□□□□ -2.06
DBF20	YPR111W	YMR279C	Q03263	540 aa		2.19	□□□□□ -2.06
DBF20	YPR111W	YPS3	Q12303	508 aa		2.19	□□□□□ -2.06
DBF20	YPR111W	MRX4	Q12467	430 aa		2.19	□□□□□ -2.06
DBF20	YPR111W	YBL008W-A	Q3E821	79 aa		2.19	□□□□□ -2.06
DBF20	YPR111W	YEL009C-A	A0A023PZF2	135 aa		2.18	□□□□□ -2.06
DBF20	YPR111W	YLR462W	O13556	202 aa		2.18	□□□□□ -2.06
DBF20	YPR111W	YAK1	P14680	807 aa		2.18	□□□□□ -2.06
DBF20	YPR111W	SLX1	P38324	304 aa		2.18	□□□□□ -2.06
DBF20	YPR111W	SPL2	P38839	148 aa		2.18	□□□□□ -2.06
DBF20	YPR111W	YEL075C	P39972	122 aa		2.18	□□□□□ -2.06
DBF20	YPR111W	PEX17	P40155	199 aa		2.18	□□□□□ -2.06
DBF20	YPR111W	PRM8	P53174	237 aa		2.18	□□□□□ -2.06
DBF20	YPR111W	DIA1	P54005	336 aa		2.18	□□□□□ -2.06
DBF20	YPR111W	TIM22	Q12328	207 aa		2.18	□□□□□ -2.06
DBF20	YPR111W	SEC4	P07560	215 aa	Known RBP	2.18	□□□□□ -2.06
DBF20	YPR111W	CBF1	P17106	351 aa		2.18	□□□□□ -2.06
DBF20	YPR111W	CPT1	P17898	393 aa		2.18	□□□□□ -2.06
DBF20	YPR111W	RAD51	P25454	400 aa		2.18	□□□□□ -2.06
DBF20	YPR111W	SRY1	P36007	326 aa		2.18	□□□□□ -2.06
DBF20	YPR111W	BMT5	P40493	336 aa		2.18	□□□□□ -2.06
DBF20	YPR111W	YFR045W	P43617	309 aa		2.18	□□□□□ -2.06
DBF20	YPR111W	SYF2	P53277	215 aa	Predicted RBP	2.18	□□□□□ -2.06
DBF20	YPR111W	GIM5	Q04493	163 aa		2.18	□□□□□ -2.06
DBF20	YPR111W	MRX8	Q05473	314 aa		2.18	□□□□□ -2.06
DBF20	YPR111W	YPL150W	Q12152	901 aa		2.18	□□□□□ -2.06
DBF20	YPR111W	PRR2	Q12310	699 aa		2.18	□□□□□ -2.06
DBF20	YPR111W	YPL247C	Q12523	523 aa		2.18	□□□□□ -2.06
DBF20	YPR111W	TUS1	Q06412	1307 aa		2.18	□□□□□ -2.06
DBF20	YPR111W	PRE7	P23724	241 aa	Known RBP	2.17	□□□□□ -2.06
DBF20	YPR111W	APS1	P35181	156 aa		2.17	□□□□□ -2.06
DBF20	YPR111W	YPT52	P36018	234 aa	Known RBP	2.17	□□□□□ -2.06
DBF20	YPR111W	PRY2	P36110	329 aa		2.17	□□□□□ -2.06
DBF20	YPR111W	ECM4	P36156	370 aa		2.17	□□□□□ -2.06
DBF20	YPR111W	SHG1	P38337	142 aa		2.17	□□□□□ -2.06
DBF20	YPR111W	SEC72	P39742	193 aa	Known RBP	2.17	□□□□□ -2.06
DBF20	YPR111W	YJL028W	P47062	111 aa		2.17	□□□□□ -2.06
DBF20	YPR111W	YJR056C	P47115	236 aa		2.17	□□□□□ -2.06
DBF20	YPR111W	BXI1	P48558	297 aa		2.17	□□□□□ -2.06
DBF20	YPR111W	ALG13	P53178	202 aa		2.17	□□□□□ -2.06
DBF20	YPR111W	YNG1	Q08465	219 aa		2.17	□□□□□ -2.06
DBF20	YPR111W	CLP1	Q08685	445 aa	Predicted RBP	2.17	□□□□□ -2.06
DBF20	YPR111W	NOT5	Q12514	560 aa	Predicted RBP	2.17	□□□□□ -2.06
DBF20	YPR111W	YBL112C	Q3E7Y4	105 aa		2.17	□□□□□ -2.06
DBF20	YPR111W	YPL229W	Q99395	206 aa		2.17	□□□□□ -2.06
DBF20	YPR111W	RPL35A	P0CX84	120 aa	Known RBP	2.16	□□□□□ -2.06
DBF20	YPR111W	RPL35B	P0CX85	120 aa	Known RBP	2.16	□□□□□ -2.06
DBF20	YPR111W	MRPL28	P36527	147 aa		2.16	□□□□□ -2.06
DBF20	YPR111W	COS8	P38723	381 aa		2.16	□□□□□ -2.06
DBF20	YPR111W	ECM14	P38836	430 aa		2.16	□□□□□ -2.06
DBF20	YPR111W	YGL034C	P53186	121 aa		2.16	□□□□□ -2.06
DBF20	YPR111W	YPL039W	Q03080	316 aa		2.16	□□□□□ -2.06
DBF20	YPR111W	YDR248C	Q03786	193 aa		2.16	□□□□□ -2.06
DBF20	YPR111W	IES4	Q08561	116 aa		2.16	□□□□□ -2.06
DBF20	YPR111W	SIR4	P11978	1358 aa		2.16	□□□□□ -2.06
DBF20	YPR111W	NUP157	P40064	1391 aa	Known RBP	2.16	□□□□□ -2.06
DBF20	YPR111W	SGA1	P08019	549 aa		2.15	□□□□□ -2.06
DBF20	YPR111W	GCN3	P14741	305 aa		2.15	□□□□□ -2.06
DBF20	YPR111W	TOM40	P23644	387 aa	Known RBP	2.15	□□□□□ -2.06
DBF20	YPR111W	RNP1	P32385	249 aa		2.15	□□□□□ -2.06
DBF20	YPR111W	TCA17	P32613	152 aa		2.15	□□□□□ -2.06
DBF20	YPR111W	RPF1	P38805	295 aa	Known RBP	2.15	□□□□□ -2.06
DBF20	YPR111W	EFM5	P53200	248 aa	Known RBP	2.15	□□□□□ -2.06
DBF20	YPR111W	GTR2	P53290	341 aa		2.15	□□□□□ -2.06
DBF20	YPR111W	HST4	P53688	370 aa		2.15	□□□□□ -2.06
DBF20	YPR111W	RTC4	P53850	401 aa		2.15	□□□□□ -2.06
DBF20	YPR111W	EMI1	Q04406	187 aa		2.15	□□□□□ -2.06
DBF20	YPR111W	GRH1	Q04410	372 aa	Known RBP	2.15	□□□□□ -2.06
DBF20	YPR111W	INM2	Q05533	292 aa		2.15	□□□□□ -2.06
DBF20	YPR111W	IES3	Q12345	250 aa		2.15	□□□□□ -2.06
DBF20	YPR111W	YOR020W-A	Q3E824	90 aa		2.15	□□□□□ -2.06
DBF20	YPR111W	HTL1	Q9URQ5	78 aa		2.15	□□□□□ -2.06
DBF20	YPR111W	SEC22	P22214	214 aa		2.15	□□□□□ -2.07
DBF20	YPR111W	CAF4	P36130	643 aa		2.15	□□□□□ -2.07
DBF20	YPR111W	POG1	P40473	351 aa		2.15	□□□□□ -2.07
DBF20	YPR111W	ERG10	P41338	398 aa	Known RBP	2.15	□□□□□ -2.07
DBF20	YPR111W	RPA43	P46669	326 aa		2.15	□□□□□ -2.07
DBF20	YPR111W	BUD13	P46947	266 aa	Predicted RBP	2.15	□□□□□ -2.07
DBF20	YPR111W	MMS2	P53152	137 aa		2.15	□□□□□ -2.07
DBF20	YPR111W	YML096W	Q04489	525 aa		2.15	□□□□□ -2.07
DBF20	YPR111W	FCF1	Q05498	189 aa	Predicted RBP	2.15	□□□□□ -2.07
DBF20	YPR111W	GPM2	Q12008	311 aa		2.15	□□□□□ -2.07
DBF20	YPR111W	YPR063C	Q12160	140 aa		2.15	□□□□□ -2.07
DBF20	YPR111W	PST1	Q12355	444 aa		2.15	□□□□□ -2.07
DBF20	YPR111W	RAD9	P14737	1309 aa		2.15	□□□□□ -2.07
DBF20	YPR111W	FLO11	P08640	1367 aa		2.15	□□□□□ -2.07
DBF20	YPR111W	CDC28	P00546	298 aa	Known RBP	2.14	□□□□□ -2.07
DBF20	YPR111W	SNF6	P18888	332 aa		2.14	□□□□□ -2.07

Retrieved 100 of 5,963 RNA–protein pairs in 25.7 ms