RNA–Protein interactions for RNA: YOL139C

CDC33, Transcript of mRNA cap binding protein and translation initiation factor eIF4E, yeast

Gene CDC33, Length 642 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC33	YOL139C	YPR147C	Q06522	304 aa	Known RBP	0.8	□□□□□ -2.28
CDC33	YOL139C	YLR030W	Q07967	263 aa		0.8	□□□□□ -2.28
CDC33	YOL139C	FMP16	Q12497	93 aa		0.8	□□□□□ -2.28
CDC33	YOL139C	YKR104W	P0CE69	306 aa		0.79	□□□□□ -2.28
CDC33	YOL139C	TMA19	P35691	167 aa	Known RBP	0.79	□□□□□ -2.28
CDC33	YOL139C	YKL070W	P36087	169 aa		0.79	□□□□□ -2.28
CDC33	YOL139C	MPA43	P53583	542 aa	Predicted RBP	0.79	□□□□□ -2.28
CDC33	YOL139C	YPR172W	Q06608	200 aa		0.79	□□□□□ -2.28
CDC33	YOL139C	HEM25	Q07534	307 aa		0.79	□□□□□ -2.28
CDC33	YOL139C	YPL119C-A	Q3E751	87 aa		0.79	□□□□□ -2.28
CDC33	YOL139C	HIS1	P00498	297 aa	Known RBP	0.78	□□□□□ -2.28
CDC33	YOL139C	MEI4	P29467	408 aa		0.78	□□□□□ -2.28
CDC33	YOL139C	MSA2	P36157	363 aa		0.78	□□□□□ -2.28
CDC33	YOL139C	MRPL40	P36534	297 aa		0.78	□□□□□ -2.28
CDC33	YOL139C	MRX3	P38172	270 aa		0.78	□□□□□ -2.28
CDC33	YOL139C	COA1	P40452	197 aa		0.78	□□□□□ -2.28
CDC33	YOL139C	YLR179C	Q06252	201 aa	Known RBP	0.78	□□□□□ -2.28
CDC33	YOL139C	RRP40	Q08285	240 aa	Known RBP	0.78	□□□□□ -2.28
CDC33	YOL139C	YPL257W	Q08974	193 aa		0.78	□□□□□ -2.28
CDC33	YOL139C	YPL162C	Q12042	273 aa		0.78	□□□□□ -2.28
CDC33	YOL139C	YER188C-A	P0C0V2	99 aa		0.77	□□□□□ -2.29
CDC33	YOL139C	YPT52	P36018	234 aa	Known RBP	0.77	□□□□□ -2.29
CDC33	YOL139C	HAM1	P47119	197 aa	Known RBP	0.77	□□□□□ -2.29
CDC33	YOL139C	COQ10	Q08058	207 aa		0.77	□□□□□ -2.29
CDC33	YOL139C	YOR186W	Q08560	144 aa		0.77	□□□□□ -2.29
CDC33	YOL139C	SWI1	P09547	1314 aa		0.77	□□□□□ -2.29
CDC33	YOL139C	SSK22	P25390	1331 aa	Predicted RBP	0.76	□□□□□ -2.29
CDC33	YOL139C	FLO9	P39712	1322 aa		0.76	□□□□□ -2.29
CDC33	YOL139C	STF1	P01098	86 aa		0.76	□□□□□ -2.29
CDC33	YOL139C	RSR1	P13856	272 aa		0.76	□□□□□ -2.29
CDC33	YOL139C	PRS2	P38620	318 aa	Known RBP	0.76	□□□□□ -2.29
CDC33	YOL139C	PET100	P38958	111 aa		0.76	□□□□□ -2.29
CDC33	YOL139C	ICE2	P40499	491 aa		0.76	□□□□□ -2.29
CDC33	YOL139C	RPL33B	P41056	107 aa	Known RBP	0.76	□□□□□ -2.29
CDC33	YOL139C	EGD1	Q02642	157 aa	Known RBP	0.76	□□□□□ -2.29
CDC33	YOL139C	YCT1	Q12235	531 aa		0.76	□□□□□ -2.29
CDC33	YOL139C	SSA3	P09435	649 aa	Known RBP	0.75	□□□□□ -2.29
CDC33	YOL139C	QRI5	P32344	111 aa		0.75	□□□□□ -2.29
CDC33	YOL139C	MRPL39	P36533	70 aa		0.75	□□□□□ -2.29
CDC33	YOL139C	BIG1	P38813	335 aa		0.75	□□□□□ -2.29
CDC33	YOL139C	YER076C	P40049	302 aa		0.75	□□□□□ -2.29
CDC33	YOL139C	TIR3	P40552	269 aa		0.75	□□□□□ -2.29
CDC33	YOL139C	RPA43	P46669	326 aa		0.75	□□□□□ -2.29
CDC33	YOL139C	UBC7	Q02159	165 aa		0.75	□□□□□ -2.29
CDC33	YOL139C	SPG4	Q04438	115 aa		0.75	□□□□□ -2.29
CDC33	YOL139C	ATG39	Q06159	398 aa		0.75	□□□□□ -2.29
CDC33	YOL139C	DBP3	P20447	523 aa	Known RBP	0.74	□□□□□ -2.29
CDC33	YOL139C	OPI1	P21957	404 aa		0.74	□□□□□ -2.29
CDC33	YOL139C	EHD3	P28817	500 aa		0.74	□□□□□ -2.29
CDC33	YOL139C	RPF1	P38805	295 aa	Known RBP	0.74	□□□□□ -2.29
CDC33	YOL139C	YAR068W	P39564	161 aa		0.74	□□□□□ -2.29
CDC33	YOL139C	SNZ3	P43545	298 aa		0.74	□□□□□ -2.29
CDC33	YOL139C	YPR098C	Q06089	161 aa		0.74	□□□□□ -2.29
CDC33	YOL139C	YLR413W	Q06689	675 aa		0.74	□□□□□ -2.29
CDC33	YOL139C	YOR020W-A	Q3E824	90 aa		0.74	□□□□□ -2.29
CDC33	YOL139C	HTL1	Q9URQ5	78 aa		0.74	□□□□□ -2.29
CDC33	YOL139C	HOM6	P31116	359 aa	Known RBP	0.73	□□□□□ -2.29
CDC33	YOL139C	FZF1	P32805	299 aa		0.73	□□□□□ -2.29
CDC33	YOL139C	JEN1	P36035	616 aa		0.73	□□□□□ -2.29
CDC33	YOL139C	RRF1	P38771	230 aa		0.73	□□□□□ -2.29
CDC33	YOL139C	BOL2	P53082	120 aa		0.73	□□□□□ -2.29
CDC33	YOL139C	ALG11	P53954	548 aa	Known RBP	0.73	□□□□□ -2.29
CDC33	YOL139C	YMR007W	Q03675	126 aa		0.73	□□□□□ -2.29
CDC33	YOL139C	OST6	Q03723	332 aa		0.73	□□□□□ -2.29
CDC33	YOL139C	ANT1	Q06497	328 aa		0.73	□□□□□ -2.29
CDC33	YOL139C	COX2	P00410	251 aa		0.72	□□□□□ -2.29
CDC33	YOL139C	QCR8	P08525	94 aa		0.72	□□□□□ -2.29
CDC33	YOL139C	DAL80	P26343	269 aa		0.72	□□□□□ -2.29
CDC33	YOL139C	GOS1	P38736	223 aa		0.72	□□□□□ -2.29
CDC33	YOL139C	MPP6	P53725	186 aa	Predicted RBP	0.72	□□□□□ -2.29
CDC33	YOL139C	RPL24A	P04449	155 aa	Known RBP	0.71	□□□□□ -2.3
CDC33	YOL139C	ECM33	P38248	429 aa	Known RBP	0.71	□□□□□ -2.3
CDC33	YOL139C	SMB1	P40018	196 aa	Known RBP	0.71	□□□□□ -2.3
CDC33	YOL139C	YNL217W	P40152	326 aa		0.71	□□□□□ -2.3
CDC33	YOL139C	MEP1	P40260	492 aa		0.71	□□□□□ -2.3
CDC33	YOL139C	PGD1	P40356	397 aa		0.71	□□□□□ -2.3
CDC33	YOL139C	YAR1	P46683	200 aa		0.71	□□□□□ -2.3
CDC33	YOL139C	ILM1	P47155	203 aa		0.71	□□□□□ -2.3
CDC33	YOL139C	GPI8	P49018	411 aa		0.71	□□□□□ -2.3
CDC33	YOL139C	RPL37A	P49166	88 aa	Known RBP	0.71	□□□□□ -2.3
CDC33	YOL139C	CUS2	P53830	285 aa	Predicted RBP	0.71	□□□□□ -2.3
CDC33	YOL139C	YNL046W	P53956	172 aa		0.71	□□□□□ -2.3
CDC33	YOL139C	ADH6	Q04894	360 aa	Known RBP	0.71	□□□□□ -2.3
CDC33	YOL139C	NIP7	Q08962	181 aa	Known RBP	0.71	□□□□□ -2.3
CDC33	YOL139C	MRPL23	Q12487	163 aa	Predicted RBP	0.71	□□□□□ -2.3
CDC33	YOL139C	CDC8	P00572	216 aa		0.7	□□□□□ -2.3
CDC33	YOL139C	IPP1	P00817	287 aa	Known RBP	0.7	□□□□□ -2.3
CDC33	YOL139C	ERD2	P18414	219 aa		0.7	□□□□□ -2.3
CDC33	YOL139C	RIO2	P40160	425 aa	Known RBP	0.7	□□□□□ -2.3
CDC33	YOL139C	DID2	P69771	204 aa		0.7	□□□□□ -2.3
CDC33	YOL139C	ABF2	Q02486	183 aa		0.7	□□□□□ -2.3
CDC33	YOL139C	CSM4	Q08955	156 aa		0.7	□□□□□ -2.3
CDC33	YOL139C	RPL27B	P0C2H7	136 aa	Known RBP	0.69	□□□□□ -2.3
CDC33	YOL139C	MRP1	P10662	321 aa	Known RBP	0.69	□□□□□ -2.3
CDC33	YOL139C	SGE1	P33335	543 aa		0.69	□□□□□ -2.3
CDC33	YOL139C	TVP38	P36164	337 aa		0.69	□□□□□ -2.3
CDC33	YOL139C	HUA1	P40325	198 aa		0.69	□□□□□ -2.3
CDC33	YOL139C	SNZ2	P53824	298 aa		0.69	□□□□□ -2.3
CDC33	YOL139C	AIM36	Q03798	255 aa		0.69	□□□□□ -2.3
CDC33	YOL139C	DAL82	P21705	255 aa		0.68	□□□□□ -2.3

Retrieved 100 of 5,963 RNA–protein pairs in 106.2 ms