RNA–Protein interactions for RNA: YNL082W

PMS1, Transcript of ATP-binding protein required for mismatch repair, yeast

Gene PMS1, Length 2,622 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PMS1	YNL082W	MAL12	P53341	584 aa		3.1	□□□□□ -1.91
PMS1	YNL082W	SNZ2	P53824	298 aa		3.1	□□□□□ -1.91
PMS1	YNL082W	ASI3	P53983	676 aa		3.1	□□□□□ -1.91
PMS1	YNL082W	OSH6	Q02201	448 aa		3.1	□□□□□ -1.91
PMS1	YNL082W	CBP6	P07253	162 aa	Predicted RBP	3.1	□□□□□ -1.91
PMS1	YNL082W	PRE7	P23724	241 aa	Known RBP	3.1	□□□□□ -1.91
PMS1	YNL082W	YNL194C	P40169	301 aa		3.1	□□□□□ -1.91
PMS1	YNL082W	NIF3	P53081	288 aa		3.1	□□□□□ -1.91
PMS1	YNL082W	MRPL50	P53724	139 aa		3.1	□□□□□ -1.91
PMS1	YNL082W	IMP1	P28627	190 aa		3.09	□□□□□ -1.91
PMS1	YNL082W	MRP21	P38175	177 aa		3.09	□□□□□ -1.91
PMS1	YNL082W	THO1	P40040	218 aa	Known RBP	3.09	□□□□□ -1.91
PMS1	YNL082W	ALG13	P53178	202 aa		3.09	□□□□□ -1.91
PMS1	YNL082W	HAL1	Q01766	294 aa		3.09	□□□□□ -1.91
PMS1	YNL082W	YDR209C	Q03480	137 aa		3.09	□□□□□ -1.91
PMS1	YNL082W	NUM1	Q00402	2748 aa		3.09	□□□□□ -1.91
PMS1	YNL082W	PHO80	P20052	293 aa		3.09	□□□□□ -1.91
PMS1	YNL082W	CSG2	P35206	410 aa		3.09	□□□□□ -1.91
PMS1	YNL082W	PRP24	P49960	444 aa	Known RBP	3.09	□□□□□ -1.91
PMS1	YNL082W	CUS2	P53830	285 aa	Predicted RBP	3.09	□□□□□ -1.91
PMS1	YNL082W	DUR1,2	P32528	1835 aa	Known RBP	3.08	□□□□□ -1.92
PMS1	YNL082W	LDB16	P25587	256 aa		3.08	□□□□□ -1.92
PMS1	YNL082W	SYS1	P41544	203 aa		3.08	□□□□□ -1.92
PMS1	YNL082W	SSQ1	Q05931	657 aa	Predicted RBP	3.08	□□□□□ -1.92
PMS1	YNL082W	SEI1	Q06058	285 aa		3.08	□□□□□ -1.92
PMS1	YNL082W	YPR098C	Q06089	161 aa		3.08	□□□□□ -1.92
PMS1	YNL082W	NHP6B	P11633	99 aa	Known RBP	3.08	□□□□□ -1.92
PMS1	YNL082W	POX1	P13711	748 aa		3.08	□□□□□ -1.92
PMS1	YNL082W	CAB3	P36076	571 aa		3.08	□□□□□ -1.92
PMS1	YNL082W	SYF2	P53277	215 aa	Predicted RBP	3.08	□□□□□ -1.92
PMS1	YNL082W	YDL211C	Q12121	372 aa		3.08	□□□□□ -1.92
PMS1	YNL082W	SNA3	P14359	133 aa		3.07	□□□□□ -1.92
PMS1	YNL082W	ADE1	P27616	306 aa		3.07	□□□□□ -1.92
PMS1	YNL082W	CAT2	P32796	670 aa	Known RBP	3.07	□□□□□ -1.92
PMS1	YNL082W	SEO1	P39709	593 aa		3.07	□□□□□ -1.92
PMS1	YNL082W	UFE1	P41834	346 aa		3.07	□□□□□ -1.92
PMS1	YNL082W	TRM9	P49957	279 aa		3.07	□□□□□ -1.92
PMS1	YNL082W	YNL046W	P53956	172 aa		3.07	□□□□□ -1.92
PMS1	YNL082W	TIM22	Q12328	207 aa		3.07	□□□□□ -1.92
PMS1	YNL082W	SOD1	P00445	154 aa	Known RBP	3.07	□□□□□ -1.92
PMS1	YNL082W	YKR104W	P0CE69	306 aa		3.07	□□□□□ -1.92
PMS1	YNL082W	RPL24B	P24000	155 aa	Known RBP	3.07	□□□□□ -1.92
PMS1	YNL082W	EMI1	Q04406	187 aa		3.07	□□□□□ -1.92
PMS1	YNL082W	ATG38	Q05789	226 aa	Known RBP	3.07	□□□□□ -1.92
PMS1	YNL082W	QCR6	P00127	147 aa		3.06	□□□□□ -1.92
PMS1	YNL082W	EPT1	P22140	391 aa		3.06	□□□□□ -1.92
PMS1	YNL082W	RME1	P32338	300 aa	Known RBP	3.06	□□□□□ -1.92
PMS1	YNL082W	FRT2	P39734	528 aa		3.06	□□□□□ -1.92
PMS1	YNL082W	KRE29	P40026	464 aa		3.06	□□□□□ -1.92
PMS1	YNL082W	MGA1	P53050	456 aa		3.06	□□□□□ -1.92
PMS1	YNL082W	SCW10	Q04951	389 aa		3.06	□□□□□ -1.92
PMS1	YNL082W	YLR126C	Q12288	251 aa		3.06	□□□□□ -1.92
PMS1	YNL082W	YPK2	P18961	677 aa		3.06	□□□□□ -1.92
PMS1	YNL082W	CDC10	P25342	322 aa	Known RBP	3.06	□□□□□ -1.92
PMS1	YNL082W	RFA3	P26755	122 aa	Known RBP	3.06	□□□□□ -1.92
PMS1	YNL082W	PRX1	P34227	261 aa	Known RBP	3.06	□□□□□ -1.92
PMS1	YNL082W	BDH1	P39714	382 aa		3.06	□□□□□ -1.92
PMS1	YNL082W	YGL118C	P53132	145 aa		3.06	□□□□□ -1.92
PMS1	YNL082W	AAH1	P53909	347 aa		3.06	□□□□□ -1.92
PMS1	YNL082W	SMD1	Q02260	146 aa	Predicted RBP	3.06	□□□□□ -1.92
PMS1	YNL082W	SPG4	Q04438	115 aa		3.06	□□□□□ -1.92
PMS1	YNL082W	ERD2	P18414	219 aa		3.06	□□□□□ -1.92
PMS1	YNL082W	TOM40	P23644	387 aa	Known RBP	3.06	□□□□□ -1.92
PMS1	YNL082W	YHL044W	P38727	235 aa		3.06	□□□□□ -1.92
PMS1	YNL082W	ASP1	P38986	381 aa	Predicted RBP	3.06	□□□□□ -1.92
PMS1	YNL082W	EDC2	P40023	145 aa	Predicted RBP	3.06	□□□□□ -1.92
PMS1	YNL082W	YOR186W	Q08560	144 aa		3.06	□□□□□ -1.92
PMS1	YNL082W	MRH4	P53166	561 aa		3.05	□□□□□ -1.92
PMS1	YNL082W	YDR222W	Q04925	415 aa		3.05	□□□□□ -1.92
PMS1	YNL082W	ARC18	Q05933	178 aa	Known RBP	3.05	□□□□□ -1.92
PMS1	YNL082W	YPL264C	Q08980	353 aa		3.05	□□□□□ -1.92
PMS1	YNL082W	NCB2	Q92317	146 aa		3.05	□□□□□ -1.92
PMS1	YNL082W	SAC3	P46674	1301 aa		3.05	□□□□□ -1.92
PMS1	YNL082W	YMR316C-A	I2HB70	103 aa		3.05	□□□□□ -1.92
PMS1	YNL082W	YBR121C-A	P0C5L4	52 aa		3.05	□□□□□ -1.92
PMS1	YNL082W	FUS3	P16892	353 aa	Known RBP	3.05	□□□□□ -1.92
PMS1	YNL082W	AVT6	P40074	448 aa		3.05	□□□□□ -1.92
PMS1	YNL082W	COG7	P53195	279 aa		3.05	□□□□□ -1.92
PMS1	YNL082W	NOP19	P53317	196 aa	Predicted RBP	3.05	□□□□□ -1.92
PMS1	YNL082W	GET4	Q12125	312 aa		3.05	□□□□□ -1.92
PMS1	YNL082W	FLO1	P32768	1537 aa		3.04	□□□□□ -1.92
PMS1	YNL082W	DPB2	P24482	689 aa	Predicted RBP	3.04	□□□□□ -1.92
PMS1	YNL082W	CAM1	P29547	415 aa	Known RBP	3.04	□□□□□ -1.92
PMS1	YNL082W	GDH2	P33327	1092 aa	Known RBP	3.04	□□□□□ -1.92
PMS1	YNL082W	OST3	P48439	350 aa		3.04	□□□□□ -1.92
PMS1	YNL082W	YGR067C	P53243	804 aa		3.04	□□□□□ -1.92
PMS1	YNL082W	YPR011C	Q12251	326 aa		3.04	□□□□□ -1.92
PMS1	YNL082W	DXO1	Q06349	442 aa		3.04	□□□□□ -1.92
PMS1	YNL082W	NOT5	Q12514	560 aa	Predicted RBP	3.04	□□□□□ -1.92
PMS1	YNL082W	TUS1	Q06412	1307 aa		3.03	□□□□□ -1.92
PMS1	YNL082W	SPT3	P06844	337 aa		3.03	□□□□□ -1.92
PMS1	YNL082W	STE18	P18852	110 aa		3.03	□□□□□ -1.92
PMS1	YNL082W	YRB1	P41920	201 aa	Known RBP	3.03	□□□□□ -1.92
PMS1	YNL082W	MIC19	P43594	170 aa		3.03	□□□□□ -1.92
PMS1	YNL082W	SWT21	P53873	357 aa	Predicted RBP	3.03	□□□□□ -1.92
PMS1	YNL082W	BNA7	Q04066	261 aa		3.03	□□□□□ -1.92
PMS1	YNL082W	YPR172W	Q06608	200 aa		3.03	□□□□□ -1.92
PMS1	YNL082W	RRS1	Q08746	203 aa	Known RBP	3.03	□□□□□ -1.92
PMS1	YNL082W	YPL247C	Q12523	523 aa		3.03	□□□□□ -1.92
PMS1	YNL082W	BCY1	P07278	416 aa	Known RBP	3.03	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 49.4 ms