RNA–Protein interactions for RNA: YLR229C

CDC42, Transcript of Small rho-like GTPase, yeastyeast

Gene CDC42, Length 576 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC42YLR229C CTF19Q02732 369 aa3.93□□□□□ -1.78
CDC42YLR229C YPL108WQ02872 168 aaPredicted RBP3.93□□□□□ -1.78
CDC42YLR229C MRPS17Q03246 237 aaPredicted RBP3.93□□□□□ -1.78
CDC42YLR229C SMA2Q04658 369 aa3.93□□□□□ -1.78
CDC42YLR229C PML1Q07930 204 aaPredicted RBP3.93□□□□□ -1.78
CDC42YLR229C TMS1Q12116 473 aa3.93□□□□□ -1.78
CDC42YLR229C VPS13Q07878 3144 aa3.92□□□□□ -1.78
CDC42YLR229C RPL25P04456 142 aaKnown RBP3.92□□□□□ -1.78
CDC42YLR229C KIN28P06242 306 aa3.92□□□□□ -1.78
CDC42YLR229C ADK1P07170 222 aaKnown RBP3.92□□□□□ -1.78
CDC42YLR229C YFR010W-AP0C5N0 62 aa3.92□□□□□ -1.78
CDC42YLR229C YPK2P18961 677 aa3.92□□□□□ -1.78
CDC42YLR229C BOS1P25385 244 aa3.92□□□□□ -1.78
CDC42YLR229C POF1P25576 258 aa3.92□□□□□ -1.78
CDC42YLR229C CNE1P27825 502 aa3.92□□□□□ -1.78
CDC42YLR229C CLB6P32943 380 aa3.92□□□□□ -1.78
CDC42YLR229C PAN3P36102 679 aaPredicted RBP3.92□□□□□ -1.78
CDC42YLR229C FLO10P36170 1169 aa3.92□□□□□ -1.78
CDC42YLR229C RIB5P38145 238 aa3.92□□□□□ -1.78
CDC42YLR229C MAL32P38158 584 aa3.92□□□□□ -1.78
CDC42YLR229C VBA2P38358 474 aaKnown RBP3.92□□□□□ -1.78
CDC42YLR229C SUR2P38992 349 aa3.92□□□□□ -1.78
CDC42YLR229C CIN2P46670 268 aa3.92□□□□□ -1.78
CDC42YLR229C OCA1P50946 238 aaPredicted RBP3.92□□□□□ -1.78
CDC42YLR229C YGL204CP53089 101 aa3.92□□□□□ -1.78
CDC42YLR229C YIP4P53093 235 aa3.92□□□□□ -1.78
CDC42YLR229C YNR062CP53748 327 aa3.92□□□□□ -1.78
CDC42YLR229C YDC1Q02896 317 aa3.92□□□□□ -1.78
CDC42YLR229C INP1Q03694 420 aa3.92□□□□□ -1.78
CDC42YLR229C YMR252CQ04814 134 aa3.92□□□□□ -1.78
CDC42YLR229C YML053CQ04978 212 aa3.92□□□□□ -1.78
CDC42YLR229C RTT103Q05543 409 aa3.92□□□□□ -1.78
CDC42YLR229C STP3Q05937 343 aa3.92□□□□□ -1.78
CDC42YLR229C SNT309Q06091 175 aaPredicted RBP3.92□□□□□ -1.78
CDC42YLR229C BER1Q06688 274 aaKnown RBP3.92□□□□□ -1.78
CDC42YLR229C CYK3Q07533 885 aa3.92□□□□□ -1.78
CDC42YLR229C BRX1Q08235 291 aaKnown RBP3.92□□□□□ -1.78
CDC42YLR229C YOR365CQ08844 703 aa3.92□□□□□ -1.78
CDC42YLR229C TFC7Q12415 435 aa3.92□□□□□ -1.78
CDC42YLR229C DET1Q99288 334 aaKnown RBP3.92□□□□□ -1.78
CDC42YLR229C CBP6P07253 162 aaPredicted RBP3.91□□□□□ -1.78
CDC42YLR229C RPB3P16370 318 aaKnown RBP3.91□□□□□ -1.78
CDC42YLR229C SEC22P22214 214 aa3.91□□□□□ -1.78
CDC42YLR229C CPR4P25334 318 aa3.91□□□□□ -1.78
CDC42YLR229C IMG1P25626 169 aa3.91□□□□□ -1.78
CDC42YLR229C PPZ2P33329 710 aa3.91□□□□□ -1.78
CDC42YLR229C MRPL15P36523 253 aa3.91□□□□□ -1.78
CDC42YLR229C TRS20P38334 175 aa3.91□□□□□ -1.78
CDC42YLR229C ANS1P38832 159 aa3.91□□□□□ -1.78
CDC42YLR229C VMA21P41806 77 aa3.91□□□□□ -1.78
CDC42YLR229C ADO1P47143 340 aaKnown RBP3.91□□□□□ -1.78
CDC42YLR229C YJR111CP47148 283 aaKnown RBP3.91□□□□□ -1.78
CDC42YLR229C CCC1P47818 322 aa3.91□□□□□ -1.78
CDC42YLR229C SOL1P50278 321 aa3.91□□□□□ -1.78
CDC42YLR229C UFD1P53044 361 aa3.91□□□□□ -1.78
CDC42YLR229C YGL235WP53071 178 aa3.91□□□□□ -1.78
CDC42YLR229C YGL117WP53133 265 aa3.91□□□□□ -1.78
CDC42YLR229C PKP2P53170 491 aa3.91□□□□□ -1.78
CDC42YLR229C TPC1P53257 314 aa3.91□□□□□ -1.78
CDC42YLR229C MTM1P53320 366 aa3.91□□□□□ -1.78
CDC42YLR229C ERG13P54839 491 aaKnown RBP3.91□□□□□ -1.78
CDC42YLR229C ATG21Q02887 496 aa3.91□□□□□ -1.78
CDC42YLR229C SNO4Q04902 237 aa3.91□□□□□ -1.78
CDC42YLR229C BNA5Q05979 453 aa3.91□□□□□ -1.78
CDC42YLR229C ARR3Q06598 404 aa3.91□□□□□ -1.78
CDC42YLR229C AIM6Q07716 390 aa3.91□□□□□ -1.78
CDC42YLR229C GRC3Q07845 632 aa3.91□□□□□ -1.78
CDC42YLR229C YLR030WQ07967 263 aa3.91□□□□□ -1.78
CDC42YLR229C SCP1Q08873 200 aa3.91□□□□□ -1.78
CDC42YLR229C HSP33Q08914 237 aaKnown RBP3.91□□□□□ -1.78
CDC42YLR229C HSP32Q08992 237 aa3.91□□□□□ -1.78
CDC42YLR229C AIM45Q12480 344 aaKnown RBP3.91□□□□□ -1.78
CDC42YLR229C YLR146W-AQ2V2P1 62 aa3.91□□□□□ -1.78
CDC42YLR229C URA6P15700 204 aa3.9□□□□□ -1.79
CDC42YLR229C CDC50P25656 391 aa3.9□□□□□ -1.79
CDC42YLR229C ERG24P32462 438 aaKnown RBP3.9□□□□□ -1.79
CDC42YLR229C YEF1P32622 495 aa3.9□□□□□ -1.79
CDC42YLR229C TIM12P32830 109 aa3.9□□□□□ -1.79
CDC42YLR229C MDL1P33310 695 aa3.9□□□□□ -1.79
CDC42YLR229C RPS27AP35997 82 aaKnown RBP3.9□□□□□ -1.79
CDC42YLR229C SDH4P37298 181 aa3.9□□□□□ -1.79
CDC42YLR229C CHK1P38147 527 aa3.9□□□□□ -1.79
CDC42YLR229C YBR292CP38357 123 aa3.9□□□□□ -1.79
CDC42YLR229C RPS27BP38711 82 aa3.9□□□□□ -1.79
CDC42YLR229C GPI16P38875 610 aa3.9□□□□□ -1.79
CDC42YLR229C PTH1P38876 190 aaKnown RBP3.9□□□□□ -1.79
CDC42YLR229C SPC25P40014 221 aa3.9□□□□□ -1.79
CDC42YLR229C LTP1P40347 161 aa3.9□□□□□ -1.79
CDC42YLR229C AVT7P40501 490 aa3.9□□□□□ -1.79
CDC42YLR229C YPS6P40583 537 aa3.9□□□□□ -1.79
CDC42YLR229C PAU15P40585 124 aa3.9□□□□□ -1.79
CDC42YLR229C MGA1P53050 456 aa3.9□□□□□ -1.79
CDC42YLR229C NIF3P53081 288 aa3.9□□□□□ -1.79
CDC42YLR229C SLX9P53251 210 aaPredicted RBP3.9□□□□□ -1.79
CDC42YLR229C MAL12P53341 584 aa3.9□□□□□ -1.79
CDC42YLR229C OGG1P53397 376 aaPredicted RBP3.9□□□□□ -1.79
CDC42YLR229C AAH1P53909 347 aa3.9□□□□□ -1.79
CDC42YLR229C OCA2P53949 197 aa3.9□□□□□ -1.79
CDC42YLR229C SNO1Q03144 224 aa3.9□□□□□ -1.79
CDC42YLR229C CAB5Q03941 241 aa3.9□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 66.8 ms