RNA–Protein interactions for RNA: YLR175W

CBF5, Transcript of Pseudouridine synthase catalytic subunit of box H/ACA snoRNPs, yeastyeast

Gene CBF5, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF5YLR175W DSF1P0CX08 502 aa3.94□□□□□ -1.78
CBF5YLR175W YNR073CP0CX09 502 aa3.94□□□□□ -1.78
CBF5YLR175W CUP1-1P0CX80 61 aa3.94□□□□□ -1.78
CBF5YLR175W CUP1-2P0CX81 61 aa3.94□□□□□ -1.78
CBF5YLR175W RPL30P14120 105 aaKnown RBP3.94□□□□□ -1.78
CBF5YLR175W HXT2P23585 541 aa3.94□□□□□ -1.78
CBF5YLR175W PCL1P24867 279 aa3.94□□□□□ -1.78
CBF5YLR175W DBF20P32328 564 aa3.94□□□□□ -1.78
CBF5YLR175W MSS1P32559 526 aaPredicted RBP3.94□□□□□ -1.78
CBF5YLR175W RIB7P33312 244 aa3.94□□□□□ -1.78
CBF5YLR175W MRPS5P33759 307 aa3.94□□□□□ -1.78
CBF5YLR175W FLO10P36170 1169 aa3.94□□□□□ -1.78
CBF5YLR175W YKE4P40544 346 aa3.94□□□□□ -1.78
CBF5YLR175W GPI14P47088 403 aaKnown RBP3.94□□□□□ -1.78
CBF5YLR175W SIP18P50263 79 aa3.94□□□□□ -1.78
CBF5YLR175W YGL159WP53110 370 aa3.94□□□□□ -1.78
CBF5YLR175W YNR048WP53740 393 aa3.94□□□□□ -1.78
CBF5YLR175W MRPL22P53881 309 aa3.94□□□□□ -1.78
CBF5YLR175W RNH201P53942 307 aa3.94□□□□□ -1.78
CBF5YLR175W MRPS16Q02608 121 aa3.94□□□□□ -1.78
CBF5YLR175W HNT1Q04344 158 aaKnown RBP3.94□□□□□ -1.78
CBF5YLR175W MRX9Q07349 420 aaKnown RBP3.94□□□□□ -1.78
CBF5YLR175W RXT3Q07458 294 aa3.94□□□□□ -1.78
CBF5YLR175W HEM25Q07534 307 aa3.94□□□□□ -1.78
CBF5YLR175W MET3P08536 511 aa3.93□□□□□ -1.78
CBF5YLR175W MAK32P23060 363 aa3.93□□□□□ -1.78
CBF5YLR175W RPI1P23250 407 aaKnown RBP3.93□□□□□ -1.78
CBF5YLR175W BUD23P25627 275 aaPredicted RBP3.93□□□□□ -1.78
CBF5YLR175W UMP1P38293 148 aa3.93□□□□□ -1.78
CBF5YLR175W YIL060WP40519 144 aa3.93□□□□□ -1.78
CBF5YLR175W MOB2P43563 287 aa3.93□□□□□ -1.78
CBF5YLR175W YJL016WP47072 561 aa3.93□□□□□ -1.78
CBF5YLR175W MSE1P48525 536 aa3.93□□□□□ -1.78
CBF5YLR175W PHB2P50085 310 aa3.93□□□□□ -1.78
CBF5YLR175W NSA1P53136 463 aaPredicted RBP3.93□□□□□ -1.78
CBF5YLR175W FMP48P53233 369 aa3.93□□□□□ -1.78
CBF5YLR175W PXR1P53335 271 aaPredicted RBP3.93□□□□□ -1.78
CBF5YLR175W LAP3Q01532 483 aaKnown RBP RIP-Chip data3.93□□□□□ -1.78not detected
CBF5YLR175W UTP15Q04305 513 aaKnown RBP3.93□□□□□ -1.78
CBF5YLR175W RFU1Q08003 200 aa3.93□□□□□ -1.78
CBF5YLR175W FIT3Q08907 204 aa3.93□□□□□ -1.78
CBF5YLR175W PRS5Q12265 496 aaKnown RBP3.93□□□□□ -1.78
CBF5YLR175W CDC28P00546 298 aaKnown RBP3.92□□□□□ -1.78
CBF5YLR175W GAL1P04385 528 aa3.92□□□□□ -1.78
CBF5YLR175W SGA1P08019 549 aa3.92□□□□□ -1.78
CBF5YLR175W SPS4P09937 338 aa3.92□□□□□ -1.78
CBF5YLR175W RPL35AP0CX84 120 aaKnown RBP3.92□□□□□ -1.78
CBF5YLR175W RPL35BP0CX85 120 aaKnown RBP3.92□□□□□ -1.78
CBF5YLR175W NHP6BP11633 99 aaKnown RBP3.92□□□□□ -1.78
CBF5YLR175W RPL3P14126 387 aaKnown RBP3.92□□□□□ -1.78
CBF5YLR175W URA6P15700 204 aa3.92□□□□□ -1.78
CBF5YLR175W CDC23P16522 626 aa3.92□□□□□ -1.78
CBF5YLR175W RFA3P26755 122 aaKnown RBP3.92□□□□□ -1.78
CBF5YLR175W DEG1P31115 442 aaKnown RBP3.92□□□□□ -1.78
CBF5YLR175W ARO4P32449 370 aaKnown RBP3.92□□□□□ -1.78
CBF5YLR175W REC114P32841 428 aa3.92□□□□□ -1.78
CBF5YLR175W MRPL36P36531 177 aa3.92□□□□□ -1.78
CBF5YLR175W TCM62P38228 572 aaKnown RBP3.92□□□□□ -1.78
CBF5YLR175W YBR242WP38331 238 aa3.92□□□□□ -1.78
CBF5YLR175W YHR122WP38829 231 aa3.92□□□□□ -1.78
CBF5YLR175W AVT7P40501 490 aa3.92□□□□□ -1.78
CBF5YLR175W CAT5P41735 233 aa3.92□□□□□ -1.78
CBF5YLR175W CIN2P46670 268 aa3.92□□□□□ -1.78
CBF5YLR175W AIM25P47140 327 aa3.92□□□□□ -1.78
CBF5YLR175W BXI1P48558 297 aa3.92□□□□□ -1.78
CBF5YLR175W AVT4P50944 713 aa3.92□□□□□ -1.78
CBF5YLR175W BUD25P85052 153 aa3.92□□□□□ -1.78
CBF5YLR175W ACS1Q01574 713 aa3.92□□□□□ -1.78
CBF5YLR175W YOR385WQ08909 290 aa3.92□□□□□ -1.78
CBF5YLR175W FSH3Q99369 266 aa3.92□□□□□ -1.78
CBF5YLR175W URA3P03962 267 aa3.92□□□□□ -1.78
CBF5YLR175W SPS2P08459 502 aa3.92□□□□□ -1.78
CBF5YLR175W SSA3P09435 649 aaKnown RBP3.92□□□□□ -1.78
CBF5YLR175W ARO3P14843 370 aaKnown RBP3.92□□□□□ -1.78
CBF5YLR175W DAL3P32459 195 aa3.92□□□□□ -1.78
CBF5YLR175W CLB6P32943 380 aa3.92□□□□□ -1.78
CBF5YLR175W SRL3P36167 246 aa3.92□□□□□ -1.78
CBF5YLR175W MRPL3P36516 390 aa3.92□□□□□ -1.78
CBF5YLR175W ARC40P38328 384 aaKnown RBP3.92□□□□□ -1.78
CBF5YLR175W OST1P41543 476 aaKnown RBP3.92□□□□□ -1.78
CBF5YLR175W LSM1P47017 172 aaKnown RBP3.92□□□□□ -1.78
CBF5YLR175W RRS1Q08746 203 aaKnown RBP3.92□□□□□ -1.78
CBF5YLR175W SCM3Q12334 223 aa3.92□□□□□ -1.78
CBF5YLR175W HTZ1Q12692 134 aaKnown RBP3.92□□□□□ -1.78
CBF5YLR175W ODC2Q99297 307 aa3.92□□□□□ -1.78
CBF5YLR175W AAC1P04710 309 aa3.91□□□□□ -1.78
CBF5YLR175W SAG1P20840 650 aa3.91□□□□□ -1.78
CBF5YLR175W IFM1P25038 676 aa3.91□□□□□ -1.78
CBF5YLR175W PEX4P29340 183 aa3.91□□□□□ -1.78
CBF5YLR175W MCH2P36032 473 aa3.91□□□□□ -1.78
CBF5YLR175W MRPL27P36526 146 aaPredicted RBP3.91□□□□□ -1.78
CBF5YLR175W FAT1P38225 669 aa3.91□□□□□ -1.78
CBF5YLR175W YND1P40009 630 aa3.91□□□□□ -1.78
CBF5YLR175W YMR144WP40214 342 aaKnown RBP3.91□□□□□ -1.78
CBF5YLR175W ATF1P40353 525 aa3.91□□□□□ -1.78
CBF5YLR175W YFL051CP43552 160 aa3.91□□□□□ -1.78
CBF5YLR175W OTU1P43558 301 aa3.91□□□□□ -1.78
CBF5YLR175W GNA1P43577 159 aaPredicted RBP3.91□□□□□ -1.78
CBF5YLR175W YGR042WP53227 271 aa3.91□□□□□ -1.78
CBF5YLR175W GIM3P53900 129 aa3.91□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 115 ms