RNA–Protein interactions for RNA: YIL148W

RPL40A, Transcript of Ubiquitin-ribosomal 60S subunit protein L40A fusion protein, yeastyeast

Gene RPL40A, Length 387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40AYIL148W PEX12Q04370 399 aa1.53□□□□□ -2.16
RPL40AYIL148W SEI1Q06058 285 aa1.53□□□□□ -2.16
RPL40AYIL148W MHT1Q12525 324 aa1.53□□□□□ -2.16
RPL40AYIL148W THP2O13539 261 aaKnown RBP1.52□□□□□ -2.17
RPL40AYIL148W RPL28P02406 149 aaKnown RBP1.52□□□□□ -2.17
RPL40AYIL148W RHO1P06780 209 aaKnown RBP1.52□□□□□ -2.17
RPL40AYIL148W DSF1P0CX08 502 aa1.52□□□□□ -2.17
RPL40AYIL148W YNR073CP0CX09 502 aa1.52□□□□□ -2.17
RPL40AYIL148W STE18P18852 110 aa1.52□□□□□ -2.17
RPL40AYIL148W YHL026CP38740 315 aa1.52□□□□□ -2.17
RPL40AYIL148W YAR068WP39564 161 aa1.52□□□□□ -2.17
RPL40AYIL148W TIF34P40217 347 aaKnown RBP1.52□□□□□ -2.17
RPL40AYIL148W OTU1P43558 301 aa1.52□□□□□ -2.17
RPL40AYIL148W RPC17P47076 161 aa1.52□□□□□ -2.17
RPL40AYIL148W MCM22P47167 239 aa1.52□□□□□ -2.17
RPL40AYIL148W TRM9P49957 279 aa1.52□□□□□ -2.17
RPL40AYIL148W YGL159WP53110 370 aa1.52□□□□□ -2.17
RPL40AYIL148W CGR1P53188 120 aa1.52□□□□□ -2.17
RPL40AYIL148W PGA2P53903 129 aa1.52□□□□□ -2.17
RPL40AYIL148W FYV6P53913 173 aa1.52□□□□□ -2.17
RPL40AYIL148W PRM15Q03262 622 aa1.52□□□□□ -2.17
RPL40AYIL148W YMR279CQ03263 540 aa1.52□□□□□ -2.17
RPL40AYIL148W BNA7Q04066 261 aa1.52□□□□□ -2.17
RPL40AYIL148W YML096WQ04489 525 aa1.52□□□□□ -2.17
RPL40AYIL148W INM2Q05533 292 aa1.52□□□□□ -2.17
RPL40AYIL148W CDC123Q05791 360 aa1.52□□□□□ -2.17
RPL40AYIL148W EMP46Q12396 444 aa1.52□□□□□ -2.17
RPL40AYIL148W NOT5Q12514 560 aaPredicted RBP1.52□□□□□ -2.17
RPL40AYIL148W YOR020W-AQ3E824 90 aa1.52□□□□□ -2.17
RPL40AYIL148W SEY1Q99287 776 aa1.52□□□□□ -2.17
RPL40AYIL148W FKS1P38631 1876 aaKnown RBP1.52□□□□□ -2.17
RPL40AYIL148W BCY1P07278 416 aaKnown RBP1.51□□□□□ -2.17
RPL40AYIL148W YBR121C-AP0C5L4 52 aa1.51□□□□□ -2.17
RPL40AYIL148W DPM1P14020 267 aaKnown RBP1.51□□□□□ -2.17
RPL40AYIL148W COQ1P18900 473 aa1.51□□□□□ -2.17
RPL40AYIL148W YMR31P19955 123 aa1.51□□□□□ -2.17
RPL40AYIL148W RPB4P20433 221 aaPredicted RBP1.51□□□□□ -2.17
RPL40AYIL148W YKL075CP36083 450 aa1.51□□□□□ -2.17
RPL40AYIL148W MSA2P36157 363 aa1.51□□□□□ -2.17
RPL40AYIL148W RIB1P38066 345 aa1.51□□□□□ -2.17
RPL40AYIL148W COG3P40094 801 aa1.51□□□□□ -2.17
RPL40AYIL148W MSS2P40990 351 aa1.51□□□□□ -2.17
RPL40AYIL148W CAT5P41735 233 aa1.51□□□□□ -2.17
RPL40AYIL148W YRB1P41920 201 aaKnown RBP1.51□□□□□ -2.17
RPL40AYIL148W GTR2P53290 341 aa1.51□□□□□ -2.17
RPL40AYIL148W SLM2P53955 656 aa1.51□□□□□ -2.17
RPL40AYIL148W ABF2Q02486 183 aa1.51□□□□□ -2.17
RPL40AYIL148W DCR2Q05924 578 aa1.51□□□□□ -2.17
RPL40AYIL148W ATG39Q06159 398 aa1.51□□□□□ -2.17
RPL40AYIL148W YPR172WQ06608 200 aa1.51□□□□□ -2.17
RPL40AYIL148W YOR268CQ08734 132 aa1.51□□□□□ -2.17
RPL40AYIL148W SIR4P11978 1358 aa1.5□□□□□ -2.17
RPL40AYIL148W COX5AP00424 153 aa1.5□□□□□ -2.17
RPL40AYIL148W RPL26AP05743 127 aaKnown RBP1.5□□□□□ -2.17
RPL40AYIL148W SGA1P08019 549 aa1.5□□□□□ -2.17
RPL40AYIL148W PUT1P09368 476 aa1.5□□□□□ -2.17
RPL40AYIL148W FCY2P17064 533 aa1.5□□□□□ -2.17
RPL40AYIL148W CCA1P21269 546 aa1.5□□□□□ -2.17
RPL40AYIL148W PBN1P25580 416 aa1.5□□□□□ -2.17
RPL40AYIL148W EHD3P28817 500 aa1.5□□□□□ -2.17
RPL40AYIL148W CLB6P32943 380 aa1.5□□□□□ -2.17
RPL40AYIL148W YHR125WP38831 101 aa1.5□□□□□ -2.17
RPL40AYIL148W YGL034CP53186 121 aa1.5□□□□□ -2.17
RPL40AYIL148W RPL26BP53221 127 aaKnown RBP1.5□□□□□ -2.17
RPL40AYIL148W YNL046WP53956 172 aa1.5□□□□□ -2.17
RPL40AYIL148W YLR030WQ07967 263 aa1.5□□□□□ -2.17
RPL40AYIL148W LSO2Q3E772 92 aaKnown RBP1.5□□□□□ -2.17
RPL40AYIL148W NCB2Q92317 146 aa1.5□□□□□ -2.17
RPL40AYIL148W Q0255P03881 472 aa1.49□□□□□ -2.17
RPL40AYIL148W RPL9AP05738 191 aaKnown RBP1.49□□□□□ -2.17
RPL40AYIL148W SNA3P14359 133 aa1.49□□□□□ -2.17
RPL40AYIL148W URA6P15700 204 aa1.49□□□□□ -2.17
RPL40AYIL148W RPO26P20435 155 aa1.49□□□□□ -2.17
RPL40AYIL148W RPS5P26783 225 aaKnown RBP1.49□□□□□ -2.17
RPL40AYIL148W IDH1P28834 360 aaKnown RBP RIP-Chip data1.49□□□□□ -2.17not detected
RPL40AYIL148W SCM4P32564 187 aa1.49□□□□□ -2.17
RPL40AYIL148W PRP18P33411 251 aaPredicted RBP1.49□□□□□ -2.17
RPL40AYIL148W MED6P38782 295 aa1.49□□□□□ -2.17
RPL40AYIL148W YIL001WP40560 513 aa1.49□□□□□ -2.17
RPL40AYIL148W SNX4P47057 423 aa1.49□□□□□ -2.17
RPL40AYIL148W MIC26P50087 233 aa1.49□□□□□ -2.17
RPL40AYIL148W RPL9BP51401 191 aaKnown RBP1.49□□□□□ -2.17
RPL40AYIL148W TIM11P81449 96 aaPredicted RBP1.49□□□□□ -2.17
RPL40AYIL148W RGM1Q00453 211 aa1.49□□□□□ -2.17
RPL40AYIL148W JLP1Q12358 412 aa1.49□□□□□ -2.17
RPL40AYIL148W SPT3P06844 337 aa1.48□□□□□ -2.17
RPL40AYIL148W YHR032W-AP0C5N6 59 aa1.48□□□□□ -2.17
RPL40AYIL148W ERD2P18414 219 aa1.48□□□□□ -2.17
RPL40AYIL148W SNF6P18888 332 aa1.48□□□□□ -2.17
RPL40AYIL148W DOA4P32571 926 aa1.48□□□□□ -2.17
RPL40AYIL148W NTF2P33331 125 aaKnown RBP1.48□□□□□ -2.17
RPL40AYIL148W YPT52P36018 234 aaKnown RBP1.48□□□□□ -2.17
RPL40AYIL148W CBT1P36038 271 aaPredicted RBP1.48□□□□□ -2.17
RPL40AYIL148W YBR063CP38083 404 aa1.48□□□□□ -2.17
RPL40AYIL148W MRPL49P40858 161 aaPredicted RBP1.48□□□□□ -2.17
RPL40AYIL148W BXI1P48558 297 aa1.48□□□□□ -2.17
RPL40AYIL148W YMR226CQ05016 267 aaKnown RBP1.48□□□□□ -2.17
RPL40AYIL148W EMC6Q12431 108 aa1.48□□□□□ -2.17
RPL40AYIL148W YKT6P36015 200 aaKnown RBP1.47□□□□□ -2.17
RPL40AYIL148W SKG1P36169 355 aa1.47□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 50.4 ms