RNA–Protein interactions for RNA: YIL123W

SIM1, Transcript of Protein of the SUN family (Sim1p, Uth1p, Nca3p, Sun4p), yeastyeast

Gene SIM1, Length 1,431 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIM1YIL123W BMT5P40493 336 aa9.75□□□□□ -0.85
SIM1YIL123W UBC12P52491 188 aa9.75□□□□□ -0.85
SIM1YIL123W YNR040WP53736 256 aa9.75□□□□□ -0.85
SIM1YIL123W ELA1P53861 379 aaPredicted RBP9.75□□□□□ -0.85
SIM1YIL123W NRG1Q03125 231 aa9.75□□□□□ -0.85
SIM1YIL123W YOL024WQ08172 172 aa9.75□□□□□ -0.85
SIM1YIL123W YBR085C-AO43137 85 aa9.74□□□□□ -0.85
SIM1YIL123W NAT2P37293 288 aa9.74□□□□□ -0.85
SIM1YIL123W MTC6P38849 526 aa9.74□□□□□ -0.85
SIM1YIL123W TAD2P47058 250 aa9.74□□□□□ -0.85
SIM1YIL123W UFD1P53044 361 aa9.74□□□□□ -0.85
SIM1YIL123W ALG9P53868 555 aaKnown RBP9.74□□□□□ -0.85
SIM1YIL123W ANT1Q06497 328 aa9.74□□□□□ -0.85
SIM1YIL123W RFU1Q08003 200 aa9.74□□□□□ -0.85
SIM1YIL123W HUT1Q12520 339 aa9.74□□□□□ -0.85
SIM1YIL123W SEC22P22214 214 aa9.73□□□□□ -0.85
SIM1YIL123W PEX4P29340 183 aa9.73□□□□□ -0.85
SIM1YIL123W RPS26AP39938 119 aaKnown RBP9.73□□□□□ -0.85
SIM1YIL123W RPS26BP39939 119 aaKnown RBP9.73□□□□□ -0.85
SIM1YIL123W MID1P41821 548 aa9.73□□□□□ -0.85
SIM1YIL123W YDR391CQ04170 232 aa9.73□□□□□ -0.85
SIM1YIL123W RTT103Q05543 409 aa9.73□□□□□ -0.85
SIM1YIL123W FEX2Q08991 375 aa9.73□□□□□ -0.85
SIM1YIL123W TFC7Q12415 435 aa9.73□□□□□ -0.85
SIM1YIL123W UBA3Q99344 299 aa9.73□□□□□ -0.85
SIM1YIL123W TPI1P00942 248 aaKnown RBP9.73□□□□□ -0.85
SIM1YIL123W GAL1P04385 528 aa9.73□□□□□ -0.85
SIM1YIL123W MIR1P23641 311 aaKnown RBP9.73□□□□□ -0.85
SIM1YIL123W DEG1P31115 442 aaKnown RBP9.73□□□□□ -0.85
SIM1YIL123W REC114P32841 428 aa9.73□□□□□ -0.85
SIM1YIL123W YBR197CP38306 217 aa9.73□□□□□ -0.85
SIM1YIL123W YEL057CP39983 233 aa9.73□□□□□ -0.85
SIM1YIL123W RPS0BP46654 252 aaKnown RBP9.73□□□□□ -0.85
SIM1YIL123W YJR011CP47086 261 aaPredicted RBP9.73□□□□□ -0.85
SIM1YIL123W SSN8P47821 323 aa9.73□□□□□ -0.85
SIM1YIL123W UBP8P50102 471 aa9.73□□□□□ -0.85
SIM1YIL123W CAB5Q03941 241 aa9.73□□□□□ -0.85
SIM1YIL123W NOC4Q06512 552 aaPredicted RBP9.73□□□□□ -0.85
SIM1YIL123W VAM3Q12241 283 aa9.73□□□□□ -0.85
SIM1YIL123W ATP14Q12349 124 aa9.73□□□□□ -0.85
SIM1YIL123W FAT1P38225 669 aa9.72□□□□□ -0.85
SIM1YIL123W STS1P38637 319 aa9.72□□□□□ -0.85
SIM1YIL123W LAG1P38703 411 aa9.72□□□□□ -0.85
SIM1YIL123W SRP1Q02821 542 aaKnown RBP9.72□□□□□ -0.85
SIM1YIL123W ISU1Q03020 165 aa9.72□□□□□ -0.85
SIM1YIL123W RCE1Q03530 315 aa9.72□□□□□ -0.85
SIM1YIL123W ARO3P14843 370 aaKnown RBP9.71□□□□□ -0.86
SIM1YIL123W EMP24P32803 203 aaKnown RBP9.71□□□□□ -0.86
SIM1YIL123W MRPS5P33759 307 aa9.71□□□□□ -0.86
SIM1YIL123W ARC40P38328 384 aaKnown RBP9.71□□□□□ -0.86
SIM1YIL123W PHB1P40961 287 aa9.71□□□□□ -0.86
SIM1YIL123W YJR111CP47148 283 aaKnown RBP9.71□□□□□ -0.86
SIM1YIL123W RAF1Q06891 181 aa9.71□□□□□ -0.86
SIM1YIL123W GRC3Q07845 632 aa9.71□□□□□ -0.86
SIM1YIL123W MED4Q12343 284 aa9.71□□□□□ -0.86
SIM1YIL123W IRA1P18963 3092 aa9.7□□□□□ -0.86
SIM1YIL123W CDC39P25655 2108 aaKnown RBP9.7□□□□□ -0.86
SIM1YIL123W QCR2P07257 368 aa9.7□□□□□ -0.86
SIM1YIL123W SPS4P09937 338 aa9.7□□□□□ -0.86
SIM1YIL123W YCR101CP25607 182 aa9.7□□□□□ -0.86
SIM1YIL123W ATG15P25641 520 aa9.7□□□□□ -0.86
SIM1YIL123W TIP1P27654 210 aaPredicted RBP9.7□□□□□ -0.86
SIM1YIL123W FIG1P38224 298 aa9.7□□□□□ -0.86
SIM1YIL123W COS8P38723 381 aa9.7□□□□□ -0.86
SIM1YIL123W OSH7P38755 437 aa9.7□□□□□ -0.86
SIM1YIL123W YIR035CP40579 254 aa9.7□□□□□ -0.86
SIM1YIL123W TIM44Q01852 431 aa9.7□□□□□ -0.86
SIM1YIL123W THI74Q04083 370 aa9.7□□□□□ -0.86
SIM1YIL123W YOR186WQ08560 144 aa9.7□□□□□ -0.86
SIM1YIL123W YPL278CQ08990 100 aa9.7□□□□□ -0.86
SIM1YIL123W MSL5Q12186 476 aaKnown RBP RIP-Chip data9.7□□□□□ -0.86not detected
SIM1YIL123W YJR112W-AQ3E743 109 aa9.7□□□□□ -0.86
SIM1YIL123W ISN1Q99312 450 aa9.7□□□□□ -0.86
SIM1YIL123W SAG1P20840 650 aa9.69□□□□□ -0.86
SIM1YIL123W PDC2P32896 925 aa9.69□□□□□ -0.86
SIM1YIL123W MCH2P36032 473 aa9.69□□□□□ -0.86
SIM1YIL123W YMR262WP38430 313 aa9.69□□□□□ -0.86
SIM1YIL123W GCV3P39726 170 aaPredicted RBP9.69□□□□□ -0.86
SIM1YIL123W YER084WP40057 128 aa9.69□□□□□ -0.86
SIM1YIL123W OST1P41543 476 aaKnown RBP9.69□□□□□ -0.86
SIM1YIL123W EAF3Q12432 401 aa9.69□□□□□ -0.86
SIM1YIL123W RPL7AP05737 244 aaKnown RBP9.68□□□□□ -0.86
SIM1YIL123W YLL053CP0CD98 152 aa9.68□□□□□ -0.86
SIM1YIL123W OCH1P31755 480 aa9.68□□□□□ -0.86
SIM1YIL123W SRY1P36007 326 aa9.68□□□□□ -0.86
SIM1YIL123W SSO2P39926 295 aa9.68□□□□□ -0.86
SIM1YIL123W GLR1P41921 483 aaKnown RBP9.68□□□□□ -0.86
SIM1YIL123W PNC1P53184 216 aaKnown RBP9.68□□□□□ -0.86
SIM1YIL123W RPN14P53196 417 aa9.68□□□□□ -0.86
SIM1YIL123W ACT1P60010 375 aaKnown RBP9.68□□□□□ -0.86
SIM1YIL123W HAS1Q03532 505 aaKnown RBP9.68□□□□□ -0.86
SIM1YIL123W YDL086WQ07505 273 aa9.68□□□□□ -0.86
SIM1YIL123W RPL7BQ12213 244 aaKnown RBP9.68□□□□□ -0.86
SIM1YIL123W YCT1Q12235 531 aa9.68□□□□□ -0.86
SIM1YIL123W YLR365WQ7LIF2 110 aa9.68□□□□□ -0.86
SIM1YIL123W MSI1P13712 422 aa9.67□□□□□ -0.86
SIM1YIL123W GLC7P32598 312 aaKnown RBP9.67□□□□□ -0.86
SIM1YIL123W ASP1P38986 381 aaPredicted RBP9.67□□□□□ -0.86
SIM1YIL123W CCS1P40202 249 aaKnown RBP9.67□□□□□ -0.86
SIM1YIL123W RPL13BP40212 199 aaKnown RBP9.67□□□□□ -0.86
Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms