RNA–Protein interactions for RNA: YHR065C

RRP3, Transcript of Protein involved in rRNA processing, yeast

Gene RRP3, Length 1,506 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RRP3	YHR065C	FLO10	P36170	1169 aa		4.12	□□□□□ -1.75
RRP3	YHR065C	UMP1	P38293	148 aa		4.12	□□□□□ -1.75
RRP3	YHR065C	YIL060W	P40519	144 aa		4.12	□□□□□ -1.75
RRP3	YHR065C	PHB1	P40961	287 aa		4.12	□□□□□ -1.75
RRP3	YHR065C	QRI1	P43123	477 aa	Known RBP	4.12	□□□□□ -1.75
RRP3	YHR065C	RPS0B	P46654	252 aa	Known RBP	4.12	□□□□□ -1.75
RRP3	YHR065C	LSM1	P47017	172 aa	Known RBP	4.12	□□□□□ -1.75
RRP3	YHR065C	BXI1	P48558	297 aa		4.12	□□□□□ -1.75
RRP3	YHR065C	YNR048W	P53740	393 aa		4.12	□□□□□ -1.75
RRP3	YHR065C	RNH201	P53942	307 aa		4.12	□□□□□ -1.75
RRP3	YHR065C	SUR7	P54003	302 aa		4.12	□□□□□ -1.75
RRP3	YHR065C	DLT1	Q04216	342 aa		4.12	□□□□□ -1.75
RRP3	YHR065C	YOR385W	Q08909	290 aa		4.12	□□□□□ -1.75
RRP3	YHR065C	TMS1	Q12116	473 aa		4.12	□□□□□ -1.75
RRP3	YHR065C	MCT1	Q12283	360 aa		4.12	□□□□□ -1.75
RRP3	YHR065C	IZH2	Q12442	317 aa		4.12	□□□□□ -1.75
RRP3	YHR065C	ODC2	Q99297	307 aa		4.12	□□□□□ -1.75
RRP3	YHR065C	TDH2	P00358	332 aa	Known RBP	4.11	□□□□□ -1.75
RRP3	YHR065C	TDH3	P00359	332 aa	Known RBP RIP-Chip data	4.11	□□□□□ -1.75	not detected
RRP3	YHR065C	URA6	P15700	204 aa		4.11	□□□□□ -1.75
RRP3	YHR065C	YCP4	P25349	247 aa	Known RBP	4.11	□□□□□ -1.75
RRP3	YHR065C	RFA3	P26755	122 aa	Known RBP	4.11	□□□□□ -1.75
RRP3	YHR065C	UTP30	P36144	274 aa	Known RBP	4.11	□□□□□ -1.75
RRP3	YHR065C	YMR262W	P38430	313 aa		4.11	□□□□□ -1.75
RRP3	YHR065C	IDP2	P41939	412 aa		4.11	□□□□□ -1.75
RRP3	YHR065C	OTU1	P43558	301 aa		4.11	□□□□□ -1.75
RRP3	YHR065C	YGL159W	P53110	370 aa		4.11	□□□□□ -1.75
RRP3	YHR065C	YGR042W	P53227	271 aa		4.11	□□□□□ -1.75
RRP3	YHR065C	BUD25	P85052	153 aa		4.11	□□□□□ -1.75
RRP3	YHR065C	MRP51	Q02950	344 aa		4.11	□□□□□ -1.75
RRP3	YHR065C	YLR283W	Q05867	314 aa		4.11	□□□□□ -1.75
RRP3	YHR065C	RAF1	Q06891	181 aa		4.11	□□□□□ -1.75
RRP3	YHR065C	MRX9	Q07349	420 aa	Known RBP	4.11	□□□□□ -1.75
RRP3	YHR065C	YLR031W	Q07978	186 aa		4.11	□□□□□ -1.75
RRP3	YHR065C	USB1	Q12208	290 aa	Known RBP	4.11	□□□□□ -1.75
RRP3	YHR065C	RDI1	Q12434	202 aa		4.11	□□□□□ -1.75
RRP3	YHR065C	HBN1	Q96VH4	193 aa		4.11	□□□□□ -1.75
RRP3	YHR065C	PHO2	P07269	559 aa		4.11	□□□□□ -1.75
RRP3	YHR065C	SGA1	P08019	549 aa		4.11	□□□□□ -1.75
RRP3	YHR065C	RPL30	P14120	105 aa	Known RBP	4.11	□□□□□ -1.75
RRP3	YHR065C	ARO4	P32449	370 aa	Known RBP	4.11	□□□□□ -1.75
RRP3	YHR065C	MRPL27	P36526	146 aa	Predicted RBP	4.11	□□□□□ -1.75
RRP3	YHR065C	XBP1	P40489	647 aa		4.11	□□□□□ -1.75
RRP3	YHR065C	YJL016W	P47072	561 aa		4.11	□□□□□ -1.75
RRP3	YHR065C	PHB2	P50085	310 aa		4.11	□□□□□ -1.75
RRP3	YHR065C	NSA1	P53136	463 aa	Predicted RBP	4.11	□□□□□ -1.75
RRP3	YHR065C	SMX3	P54999	86 aa	Predicted RBP	4.11	□□□□□ -1.75
RRP3	YHR065C	RPL6A	Q02326	176 aa	Known RBP	4.11	□□□□□ -1.75
RRP3	YHR065C	RCE1	Q03530	315 aa		4.11	□□□□□ -1.75
RRP3	YHR065C	YDR391C	Q04170	232 aa		4.11	□□□□□ -1.75
RRP3	YHR065C	YPL272C	Q08984	517 aa		4.11	□□□□□ -1.75
RRP3	YHR065C	SPS4	P09937	338 aa		4.1	□□□□□ -1.75
RRP3	YHR065C	DSF1	P0CX08	502 aa		4.1	□□□□□ -1.75
RRP3	YHR065C	YNR073C	P0CX09	502 aa		4.1	□□□□□ -1.75
RRP3	YHR065C	GRX2	P17695	143 aa	Known RBP	4.1	□□□□□ -1.75
RRP3	YHR065C	HNM1	P19807	563 aa		4.1	□□□□□ -1.75
RRP3	YHR065C	PCL1	P24867	279 aa		4.1	□□□□□ -1.75
RRP3	YHR065C	IFM1	P25038	676 aa		4.1	□□□□□ -1.75
RRP3	YHR065C	VMA5	P31412	392 aa	Known RBP	4.1	□□□□□ -1.75
RRP3	YHR065C	APL3	P38065	1025 aa		4.1	□□□□□ -1.75
RRP3	YHR065C	TCM62	P38228	572 aa	Known RBP	4.1	□□□□□ -1.75
RRP3	YHR065C	MTC6	P38849	526 aa		4.1	□□□□□ -1.75
RRP3	YHR065C	MOB2	P43563	287 aa		4.1	□□□□□ -1.75
RRP3	YHR065C	GNA1	P43577	159 aa	Predicted RBP	4.1	□□□□□ -1.75
RRP3	YHR065C	CIN2	P46670	268 aa		4.1	□□□□□ -1.75
RRP3	YHR065C	AVT4	P50944	713 aa		4.1	□□□□□ -1.75
RRP3	YHR065C	RSM27	P53305	110 aa		4.1	□□□□□ -1.75
RRP3	YHR065C	YML122C	Q03207	126 aa		4.1	□□□□□ -1.75
RRP3	YHR065C	VBA1	Q04301	562 aa		4.1	□□□□□ -1.75
RRP3	YHR065C	YLR352W	Q06479	807 aa		4.1	□□□□□ -1.75
RRP3	YHR065C	AAC1	P04710	309 aa		4.09	□□□□□ -1.75
RRP3	YHR065C	HEM4	P06174	275 aa		4.09	□□□□□ -1.75
RRP3	YHR065C	ARG80	P07249	177 aa		4.09	□□□□□ -1.75
RRP3	YHR065C	CPR4	P25334	318 aa		4.09	□□□□□ -1.75
RRP3	YHR065C	DEG1	P31115	442 aa	Known RBP	4.09	□□□□□ -1.75
RRP3	YHR065C	MRPL36	P36531	177 aa		4.09	□□□□□ -1.75
RRP3	YHR065C	RRF1	P38771	230 aa		4.09	□□□□□ -1.75
RRP3	YHR065C	YER084W	P40057	128 aa		4.09	□□□□□ -1.75
RRP3	YHR065C	GPP1	P41277	250 aa	Known RBP	4.09	□□□□□ -1.75
RRP3	YHR065C	MRPL50	P53724	139 aa		4.09	□□□□□ -1.75
RRP3	YHR065C	NGL2	Q03264	515 aa	Known RBP	4.09	□□□□□ -1.75
RRP3	YHR065C	YDL218W	Q07629	317 aa		4.09	□□□□□ -1.75
RRP3	YHR065C	RFU1	Q08003	200 aa		4.09	□□□□□ -1.75
RRP3	YHR065C	PET20	Q99373	253 aa		4.09	□□□□□ -1.75
RRP3	YHR065C	CDC28	P00546	298 aa	Known RBP	4.08	□□□□□ -1.76
RRP3	YHR065C	PUT1	P09368	476 aa		4.08	□□□□□ -1.76
RRP3	YHR065C	RPL35A	P0CX84	120 aa	Known RBP	4.08	□□□□□ -1.76
RRP3	YHR065C	RPL35B	P0CX85	120 aa	Known RBP	4.08	□□□□□ -1.76
RRP3	YHR065C	YCR016W	P25617	290 aa	Known RBP	4.08	□□□□□ -1.76
RRP3	YHR065C	ATG15	P25641	520 aa		4.08	□□□□□ -1.76
RRP3	YHR065C	MRP17	P28778	131 aa		4.08	□□□□□ -1.76
RRP3	YHR065C	FMT1	P32785	401 aa		4.08	□□□□□ -1.76
RRP3	YHR065C	YBL010C	P32788	280 aa		4.08	□□□□□ -1.76
RRP3	YHR065C	REC114	P32841	428 aa		4.08	□□□□□ -1.76
RRP3	YHR065C	MRPS5	P33759	307 aa		4.08	□□□□□ -1.76
RRP3	YHR065C	ARC40	P38328	384 aa	Known RBP	4.08	□□□□□ -1.76
RRP3	YHR065C	VMA22	P38784	181 aa		4.08	□□□□□ -1.76
RRP3	YHR065C	YGL260W	P53056	76 aa		4.08	□□□□□ -1.76
RRP3	YHR065C	ALG12	P53730	551 aa		4.08	□□□□□ -1.76
RRP3	YHR065C	ARG5,6	Q01217	863 aa		4.08	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 26.2 ms