RNA–Protein interactions for RNA: YGR013W

SNU71, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU71, Length 1,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU71YGR013W YLR281CQ05863 155 aa5.47□□□□□ -1.53
SNU71YGR013W RIF2Q06208 395 aa5.47□□□□□ -1.53
SNU71YGR013W PHO2P07269 559 aa5.47□□□□□ -1.53
SNU71YGR013W BCY1P07278 416 aaKnown RBP5.47□□□□□ -1.53
SNU71YGR013W YCR043CP25361 127 aa5.47□□□□□ -1.53
SNU71YGR013W ANR2P36090 516 aaPredicted RBP5.47□□□□□ -1.53
SNU71YGR013W LSM12P38828 187 aaKnown RBP5.47□□□□□ -1.53
SNU71YGR013W EGT2P42835 1041 aa5.47□□□□□ -1.53
SNU71YGR013W MSO1P53604 210 aaKnown RBP5.47□□□□□ -1.53
SNU71YGR013W NRM1P53718 249 aa5.47□□□□□ -1.53
SNU71YGR013W YNR066CP53752 436 aa5.47□□□□□ -1.53
SNU71YGR013W CWC25P53854 179 aaKnown RBP5.47□□□□□ -1.53
SNU71YGR013W TPS1Q00764 495 aaKnown RBP5.47□□□□□ -1.53
SNU71YGR013W DXO1Q06349 442 aa5.47□□□□□ -1.53
SNU71YGR013W HEM25Q07534 307 aa5.47□□□□□ -1.53
SNU71YGR013W HMS1Q12398 434 aa5.47□□□□□ -1.53
SNU71YGR013W STE7P06784 515 aa5.46□□□□□ -1.54
SNU71YGR013W CPR4P25334 318 aa5.46□□□□□ -1.54
SNU71YGR013W ATG15P25641 520 aa5.46□□□□□ -1.54
SNU71YGR013W PEX2P32800 271 aa5.46□□□□□ -1.54
SNU71YGR013W YLR152CP54072 576 aa5.46□□□□□ -1.54
SNU71YGR013W RFM1Q12192 310 aa5.46□□□□□ -1.54
SNU71YGR013W SFM1Q12314 213 aa5.46□□□□□ -1.54
SNU71YGR013W YBL010CP32788 280 aa5.45□□□□□ -1.54
SNU71YGR013W CAF4P36130 643 aa5.45□□□□□ -1.54
SNU71YGR013W FES1P38260 290 aa5.45□□□□□ -1.54
SNU71YGR013W MBA1P38300 278 aa5.45□□□□□ -1.54
SNU71YGR013W WSC4P38739 605 aa5.45□□□□□ -1.54
SNU71YGR013W KRE29P40026 464 aa5.45□□□□□ -1.54
SNU71YGR013W YER121WP40076 114 aa5.45□□□□□ -1.54
SNU71YGR013W PAN6P40459 309 aa5.45□□□□□ -1.54
SNU71YGR013W YJL213WP40896 331 aa5.45□□□□□ -1.54
SNU71YGR013W BNS1P50084 137 aa5.45□□□□□ -1.54
SNU71YGR013W NSA1P53136 463 aaPredicted RBP5.45□□□□□ -1.54
SNU71YGR013W SSU72P53538 206 aaPredicted RBP5.45□□□□□ -1.54
SNU71YGR013W UTP15Q04305 513 aaKnown RBP5.45□□□□□ -1.54
SNU71YGR013W YPL245WQ12179 454 aaKnown RBP5.45□□□□□ -1.54
SNU71YGR013W SPT3P06844 337 aa5.45□□□□□ -1.54
SNU71YGR013W RPS8AP0CX39 200 aaKnown RBP5.45□□□□□ -1.54
SNU71YGR013W RPS8BP0CX40 200 aaKnown RBP5.45□□□□□ -1.54
SNU71YGR013W PHO80P20052 293 aa5.45□□□□□ -1.54
SNU71YGR013W BUD23P25627 275 aaPredicted RBP5.45□□□□□ -1.54
SNU71YGR013W MRP21P38175 177 aa5.45□□□□□ -1.54
SNU71YGR013W YIL067CP40514 678 aa5.45□□□□□ -1.54
SNU71YGR013W GVP36P40531 326 aaKnown RBP5.45□□□□□ -1.54
SNU71YGR013W IRC24P40580 263 aa5.45□□□□□ -1.54
SNU71YGR013W CLD1P53264 445 aa5.45□□□□□ -1.54
SNU71YGR013W RPN8Q08723 338 aaKnown RBP5.45□□□□□ -1.54
SNU71YGR013W YOR292CQ08743 309 aa5.45□□□□□ -1.54
SNU71YGR013W YPL150WQ12152 901 aa5.45□□□□□ -1.54
SNU71YGR013W PPH21P23594 369 aa5.44□□□□□ -1.54
SNU71YGR013W LDS1P31379 325 aa5.44□□□□□ -1.54
SNU71YGR013W HEK2P38199 381 aaKnown RBP RIP-Chip data5.44□□□□□ -1.54not detected
SNU71YGR013W HYR1P40581 163 aaKnown RBP5.44□□□□□ -1.54
SNU71YGR013W YET2Q04210 160 aa5.44□□□□□ -1.54
SNU71YGR013W RPL4AP10664 362 aaKnown RBP5.43□□□□□ -1.54
SNU71YGR013W CDC13P32797 924 aaKnown RBP5.43□□□□□ -1.54
SNU71YGR013W YHR127WP38833 243 aaKnown RBP5.43□□□□□ -1.54
SNU71YGR013W YJR141WP47172 347 aaPredicted RBP5.43□□□□□ -1.54
SNU71YGR013W YJR149WP47177 404 aa5.43□□□□□ -1.54
SNU71YGR013W RPL4BP49626 362 aaKnown RBP5.43□□□□□ -1.54
SNU71YGR013W SDC1Q03323 175 aa5.43□□□□□ -1.54
SNU71YGR013W THI7Q05998 598 aa5.43□□□□□ -1.54
SNU71YGR013W HHF1P02309 103 aaKnown RBP5.43□□□□□ -1.54
SNU71YGR013W RPB5P20434 215 aa5.43□□□□□ -1.54
SNU71YGR013W SGE1P33335 543 aa5.43□□□□□ -1.54
SNU71YGR013W ASK1P35734 292 aa5.43□□□□□ -1.54
SNU71YGR013W YCR087C-AP37263 153 aa5.43□□□□□ -1.54
SNU71YGR013W YNL208WP40159 199 aaKnown RBP5.43□□□□□ -1.54
SNU71YGR013W IRC18P47056 224 aa5.43□□□□□ -1.54
SNU71YGR013W PRP24P49960 444 aaKnown RBP5.43□□□□□ -1.54
SNU71YGR013W SLX9P53251 210 aaPredicted RBP5.43□□□□□ -1.54
SNU71YGR013W SNA4Q07549 140 aa5.43□□□□□ -1.54
SNU71YGR013W HNT3Q08702 217 aa5.43□□□□□ -1.54
SNU71YGR013W RTR2Q12378 196 aa5.43□□□□□ -1.54
SNU71YGR013W GCN3P14741 305 aa5.42□□□□□ -1.54
SNU71YGR013W URA6P15700 204 aa5.42□□□□□ -1.54
SNU71YGR013W MAK31P23059 88 aa5.42□□□□□ -1.54
SNU71YGR013W CSE2P33308 149 aa5.42□□□□□ -1.54
SNU71YGR013W CIN5P40917 295 aa5.42□□□□□ -1.54
SNU71YGR013W YJR054WP47114 497 aa5.42□□□□□ -1.54
SNU71YGR013W OST3P48439 350 aa5.42□□□□□ -1.54
SNU71YGR013W CRH1P53301 507 aa5.42□□□□□ -1.54
SNU71YGR013W ADD37Q03233 198 aa5.42□□□□□ -1.54
SNU71YGR013W IPP1P00817 287 aaKnown RBP5.41□□□□□ -1.54
SNU71YGR013W SNA3P14359 133 aa5.41□□□□□ -1.54
SNU71YGR013W YCR025CP25352 136 aa5.41□□□□□ -1.54
SNU71YGR013W SPS18P32572 300 aa5.41□□□□□ -1.54
SNU71YGR013W GRE3P38715 327 aaKnown RBP RIP-Chip data5.41□□□□□ -1.54not detected
SNU71YGR013W SRP14P38985 146 aa5.41□□□□□ -1.54
SNU71YGR013W YKE4P40544 346 aa5.41□□□□□ -1.54
SNU71YGR013W ATG18P43601 500 aa5.41□□□□□ -1.54
SNU71YGR013W SDS23P53172 527 aa5.41□□□□□ -1.54
SNU71YGR013W COA4Q05809 96 aa5.41□□□□□ -1.54
SNU71YGR013W SEI1Q06058 285 aa5.41□□□□□ -1.54
SNU71YGR013W TPO4Q12256 659 aa5.41□□□□□ -1.54
SNU71YGR013W GPA2P10823 449 aa5.41□□□□□ -1.54
SNU71YGR013W MRPL3P36516 390 aa5.41□□□□□ -1.54
SNU71YGR013W RFT1P38206 574 aaPredicted RBP5.41□□□□□ -1.54
SNU71YGR013W AME1P38313 324 aa5.41□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms