RNA–Protein interactions for RNA: YFL002C

SPB4, Transcript of Putative ATP-dependent RNA helicase, yeastyeast

Gene SPB4, Length 1,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPB4YFL002C PRY2P36110 329 aa3.18□□□□□ -1.9
SPB4YFL002C DBP7P36120 742 aaKnown RBP3.18□□□□□ -1.9
SPB4YFL002C PEX17P40155 199 aa3.18□□□□□ -1.9
SPB4YFL002C UFD1P53044 361 aa3.18□□□□□ -1.9
SPB4YFL002C OAC1P32332 324 aa3.17□□□□□ -1.9
SPB4YFL002C SSH1P38353 490 aaKnown RBP3.17□□□□□ -1.9
SPB4YFL002C YHL044WP38727 235 aa3.17□□□□□ -1.9
SPB4YFL002C YJR056CP47115 236 aa3.17□□□□□ -1.9
SPB4YFL002C YPL039WQ03080 316 aa3.17□□□□□ -1.9
SPB4YFL002C YDR248CQ03786 193 aa3.17□□□□□ -1.9
SPB4YFL002C CAF4P36130 643 aa3.16□□□□□ -1.9
SPB4YFL002C UFE1P41834 346 aa3.16□□□□□ -1.9
SPB4YFL002C FAR7P43592 221 aa3.16□□□□□ -1.9
SPB4YFL002C YGR018CP53211 109 aa3.16□□□□□ -1.9
SPB4YFL002C CAX4P53223 239 aa3.16□□□□□ -1.9
SPB4YFL002C SNO1Q03144 224 aa3.16□□□□□ -1.9
SPB4YFL002C TVP15Q03860 143 aa3.16□□□□□ -1.9
SPB4YFL002C COX10P21592 462 aa3.16□□□□□ -1.9
SPB4YFL002C YBL081WP38180 368 aaKnown RBP3.16□□□□□ -1.9
SPB4YFL002C FES1P38260 290 aa3.16□□□□□ -1.9
SPB4YFL002C ECM14P38836 430 aa3.16□□□□□ -1.9
SPB4YFL002C SRP14P38985 146 aa3.16□□□□□ -1.9
SPB4YFL002C YER189WP40104 122 aa3.16□□□□□ -1.9
SPB4YFL002C ILM1P47155 203 aa3.16□□□□□ -1.9
SPB4YFL002C YPR011CQ12251 326 aa3.16□□□□□ -1.9
SPB4YFL002C TIM22Q12328 207 aa3.16□□□□□ -1.9
SPB4YFL002C YBL112CQ3E7Y4 105 aa3.16□□□□□ -1.9
SPB4YFL002C ECM33P38248 429 aaKnown RBP3.15□□□□□ -1.91
SPB4YFL002C YJL028WP47062 111 aa3.15□□□□□ -1.91
SPB4YFL002C SSU72P53538 206 aaPredicted RBP3.15□□□□□ -1.91
SPB4YFL002C YNL140CP53910 189 aa3.15□□□□□ -1.91
SPB4YFL002C OSH6Q02201 448 aa3.15□□□□□ -1.91
SPB4YFL002C EMI1Q04406 187 aa3.15□□□□□ -1.91
SPB4YFL002C YTH1Q06102 208 aaPredicted RBP3.15□□□□□ -1.91
SPB4YFL002C SMT3Q12306 101 aaKnown RBP3.15□□□□□ -1.91
SPB4YFL002C AGC1Q12482 902 aa3.15□□□□□ -1.91
SPB4YFL002C DRS2P39524 1355 aa3.15□□□□□ -1.91
SPB4YFL002C SWI1P09547 1314 aa3.15□□□□□ -1.91
SPB4YFL002C YHR139C-AO13536 103 aa3.14□□□□□ -1.91
SPB4YFL002C CBP6P07253 162 aaPredicted RBP3.14□□□□□ -1.91
SPB4YFL002C TRR1P29509 319 aaKnown RBP3.14□□□□□ -1.91
SPB4YFL002C APS1P35181 156 aa3.14□□□□□ -1.91
SPB4YFL002C ECM13P38195 257 aa3.14□□□□□ -1.91
SPB4YFL002C TEM1P38987 245 aa3.14□□□□□ -1.91
SPB4YFL002C MTW1P39731 289 aa3.14□□□□□ -1.91
SPB4YFL002C YER121WP40076 114 aa3.14□□□□□ -1.91
SPB4YFL002C CAT5P41735 233 aa3.14□□□□□ -1.91
SPB4YFL002C MEP2P41948 499 aa3.14□□□□□ -1.91
SPB4YFL002C SDT1P53078 280 aa3.14□□□□□ -1.91
SPB4YFL002C ERV29P53337 310 aa3.14□□□□□ -1.91
SPB4YFL002C YML108WQ03759 105 aa3.14□□□□□ -1.91
SPB4YFL002C YDL211CQ12121 372 aa3.14□□□□□ -1.91
SPB4YFL002C USB1Q12208 290 aaKnown RBP3.14□□□□□ -1.91
SPB4YFL002C FLO11P08640 1367 aa3.14□□□□□ -1.91
SPB4YFL002C IPP1P00817 287 aaKnown RBP3.14□□□□□ -1.91
SPB4YFL002C YEL045CP32616 141 aa3.14□□□□□ -1.91
SPB4YFL002C UBC6P33296 250 aaPredicted RBP3.14□□□□□ -1.91
SPB4YFL002C GTR2P53290 341 aa3.14□□□□□ -1.91
SPB4YFL002C NRK1P53915 240 aa3.14□□□□□ -1.91
SPB4YFL002C YLR460CP54007 376 aa3.14□□□□□ -1.91
SPB4YFL002C NOC4Q06512 552 aaPredicted RBP3.14□□□□□ -1.91
SPB4YFL002C EMP46Q12396 444 aa3.14□□□□□ -1.91
SPB4YFL002C LSO2Q3E772 92 aaKnown RBP3.14□□□□□ -1.91
SPB4YFL002C ADH1P00330 348 aaKnown RBP3.13□□□□□ -1.91
SPB4YFL002C SEC4P07560 215 aaKnown RBP3.13□□□□□ -1.91
SPB4YFL002C PUT1P09368 476 aa3.13□□□□□ -1.91
SPB4YFL002C PRE7P23724 241 aaKnown RBP3.13□□□□□ -1.91
SPB4YFL002C DID2P69771 204 aa3.13□□□□□ -1.91
SPB4YFL002C PET191Q02772 108 aa3.13□□□□□ -1.91
SPB4YFL002C YML096WQ04489 525 aa3.13□□□□□ -1.91
SPB4YFL002C MCH1Q07376 486 aa3.13□□□□□ -1.91
SPB4YFL002C ZWF1P11412 505 aaKnown RBP3.12□□□□□ -1.91
SPB4YFL002C GCY1P14065 312 aaKnown RBP RIP-Chip data3.12□□□□□ -1.91not detected
SPB4YFL002C BMH1P29311 267 aaKnown RBP3.12□□□□□ -1.91
SPB4YFL002C YPT52P36018 234 aaKnown RBP3.12□□□□□ -1.91
SPB4YFL002C TRM7P38238 310 aaKnown RBP3.12□□□□□ -1.91
SPB4YFL002C AME1P38313 324 aa3.12□□□□□ -1.91
SPB4YFL002C PRM8P53174 237 aa3.12□□□□□ -1.91
SPB4YFL002C YGR067CP53243 804 aa3.12□□□□□ -1.91
SPB4YFL002C RTC4P53850 401 aa3.12□□□□□ -1.91
SPB4YFL002C ARO80Q04052 950 aa3.12□□□□□ -1.91
SPB4YFL002C INM2Q05533 292 aa3.12□□□□□ -1.91
SPB4YFL002C AUS1Q08409 1394 aa3.12□□□□□ -1.91
SPB4YFL002C YLR462WO13556 202 aa3.12□□□□□ -1.91
SPB4YFL002C QCR2P07257 368 aa3.12□□□□□ -1.91
SPB4YFL002C MRS1P07266 363 aa3.12□□□□□ -1.91
SPB4YFL002C SPL2P38839 148 aa3.12□□□□□ -1.91
SPB4YFL002C BDH1P39714 382 aa3.12□□□□□ -1.91
SPB4YFL002C YEL075CP39972 122 aa3.12□□□□□ -1.91
SPB4YFL002C GRX8Q05926 109 aa3.12□□□□□ -1.91
SPB4YFL002C YLR179CQ06252 201 aaKnown RBP3.12□□□□□ -1.91
SPB4YFL002C YOL019WQ08157 551 aa3.12□□□□□ -1.91
SPB4YFL002C SLD7Q08457 257 aa3.12□□□□□ -1.91
SPB4YFL002C MDM32Q12171 622 aa3.12□□□□□ -1.91
SPB4YFL002C PST1Q12355 444 aa3.12□□□□□ -1.91
SPB4YFL002C YPL247CQ12523 523 aa3.12□□□□□ -1.91
SPB4YFL002C ISD11Q6Q560 94 aa3.12□□□□□ -1.91
SPB4YFL002C YEL009C-AA0A023PZF2 135 aa3.11□□□□□ -1.91
SPB4YFL002C HSP26P15992 214 aaKnown RBP RIP-Chip data3.11□□□□□ -1.91not detected
SPB4YFL002C SFC1P33303 322 aa3.11□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms