RNA–Protein interactions for RNA: YDR312W

SSF2, Transcript of Protein required for ribosomal large subunit maturation, yeastyeast

Gene SSF2, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSF2YDR312W SMC2P38989 1170 aaKnown RBP1.85□□□□□ -2.11
SSF2YDR312W DDI1P40087 428 aa1.85□□□□□ -2.11
SSF2YDR312W YAR1P46683 200 aa1.85□□□□□ -2.11
SSF2YDR312W NBP1P52919 319 aaPredicted RBP1.85□□□□□ -2.11
SSF2YDR312W VPS60Q03390 229 aa1.85□□□□□ -2.11
SSF2YDR312W TVP15Q03860 143 aa1.85□□□□□ -2.11
SSF2YDR312W VBA1Q04301 562 aa1.85□□□□□ -2.11
SSF2YDR312W NNT1Q05874 261 aa1.85□□□□□ -2.11
SSF2YDR312W YPR063CQ12160 140 aa1.85□□□□□ -2.11
SSF2YDR312W YOR114WQ12219 294 aa1.85□□□□□ -2.11
SSF2YDR312W SME1Q12330 94 aaPredicted RBP1.85□□□□□ -2.11
SSF2YDR312W IES3Q12345 250 aa1.85□□□□□ -2.11
SSF2YDR312W PEX11Q12462 236 aa1.85□□□□□ -2.11
SSF2YDR312W YOS9Q99220 542 aa1.85□□□□□ -2.11
SSF2YDR312W YMR316C-AI2HB70 103 aa1.84□□□□□ -2.12
SSF2YDR312W HIS1P00498 297 aaKnown RBP1.84□□□□□ -2.12
SSF2YDR312W PET494P07390 489 aaPredicted RBP1.84□□□□□ -2.12
SSF2YDR312W MATALPHA2P0CY08 210 aa1.84□□□□□ -2.12
SSF2YDR312W HMLALPHA2P0CY09 210 aa1.84□□□□□ -2.12
SSF2YDR312W SCL1P21243 252 aaKnown RBP1.84□□□□□ -2.12
SSF2YDR312W SPT8P38915 602 aa1.84□□□□□ -2.12
SSF2YDR312W SPO73P40031 143 aa1.84□□□□□ -2.12
SSF2YDR312W SYS1P41544 203 aa1.84□□□□□ -2.12
SSF2YDR312W YFR045WP43617 309 aa1.84□□□□□ -2.12
SSF2YDR312W MNT4P53745 580 aa1.84□□□□□ -2.12
SSF2YDR312W RTC4P53850 401 aa1.84□□□□□ -2.12
SSF2YDR312W TIM8P57744 87 aa1.84□□□□□ -2.12
SSF2YDR312W ADH6Q04894 360 aaKnown RBP1.84□□□□□ -2.12
SSF2YDR312W SFH1Q06168 426 aa1.84□□□□□ -2.12
SSF2YDR312W TAZ1Q06510 381 aa1.84□□□□□ -2.12
SSF2YDR312W YLL007CQ07799 665 aa1.84□□□□□ -2.12
SSF2YDR312W YLR030WQ07967 263 aa1.84□□□□□ -2.12
SSF2YDR312W TDH1P00360 332 aaKnown RBP1.83□□□□□ -2.12
SSF2YDR312W COX2P00410 251 aa1.83□□□□□ -2.12
SSF2YDR312W RPS3P05750 240 aaKnown RBP1.83□□□□□ -2.12
SSF2YDR312W YAK1P14680 807 aa1.83□□□□□ -2.12
SSF2YDR312W BMH1P29311 267 aaKnown RBP1.83□□□□□ -2.12
SSF2YDR312W ERG2P32352 222 aa1.83□□□□□ -2.12
SSF2YDR312W CAT2P32796 670 aaKnown RBP1.83□□□□□ -2.12
SSF2YDR312W PHO89P38361 574 aa1.83□□□□□ -2.12
SSF2YDR312W ECM14P38836 430 aa1.83□□□□□ -2.12
SSF2YDR312W SEN34P39707 275 aa1.83□□□□□ -2.12
SSF2YDR312W SLX9P53251 210 aaPredicted RBP1.83□□□□□ -2.12
SSF2YDR312W GTO3Q04806 366 aa1.83□□□□□ -2.12
SSF2YDR312W YDR222WQ04925 415 aa1.83□□□□□ -2.12
SSF2YDR312W YPR114WQ06107 315 aa1.83□□□□□ -2.12
SSF2YDR312W VPS68Q12016 184 aa1.83□□□□□ -2.12
SSF2YDR312W MED4Q12343 284 aa1.83□□□□□ -2.12
SSF2YDR312W SNF8Q12483 233 aa1.83□□□□□ -2.12
SSF2YDR312W AI5_BETAQ9ZZX0 354 aa1.83□□□□□ -2.12
SSF2YDR312W MDN1Q12019 4910 aaKnown RBP1.82□□□□□ -2.12
SSF2YDR312W JIP3O13555 125 aa1.82□□□□□ -2.12
SSF2YDR312W MRP1P10662 321 aaKnown RBP1.82□□□□□ -2.12
SSF2YDR312W ZWF1P11412 505 aaKnown RBP1.82□□□□□ -2.12
SSF2YDR312W RSR1P13856 272 aa1.82□□□□□ -2.12
SSF2YDR312W YUH1P35127 236 aa1.82□□□□□ -2.12
SSF2YDR312W TRM7P38238 310 aaKnown RBP1.82□□□□□ -2.12
SSF2YDR312W YBR062CP38239 180 aa1.82□□□□□ -2.12
SSF2YDR312W PRM9P39551 298 aa1.82□□□□□ -2.12
SSF2YDR312W RPL10P41805 221 aaKnown RBP1.82□□□□□ -2.12
SSF2YDR312W TRM9P49957 279 aa1.82□□□□□ -2.12
SSF2YDR312W SDC1Q03323 175 aa1.82□□□□□ -2.12
SSF2YDR312W ARO80Q04052 950 aa1.82□□□□□ -2.12
SSF2YDR312W RLP24Q07915 199 aaKnown RBP1.82□□□□□ -2.12
SSF2YDR312W PLB3Q08108 686 aa1.82□□□□□ -2.12
SSF2YDR312W YOR342CQ12182 319 aa1.82□□□□□ -2.12
SSF2YDR312W SMT3Q12306 101 aaKnown RBP1.82□□□□□ -2.12
SSF2YDR312W YAL063C-AQ3E791 96 aa1.82□□□□□ -2.12
SSF2YDR312W YEL009C-AA0A023PZF2 135 aa1.81□□□□□ -2.12
SSF2YDR312W POP8P38208 133 aa1.81□□□□□ -2.12
SSF2YDR312W EDC3P39998 551 aaKnown RBP1.81□□□□□ -2.12
SSF2YDR312W YIL012WP40551 113 aa1.81□□□□□ -2.12
SSF2YDR312W RPE1P46969 238 aa1.81□□□□□ -2.12
SSF2YDR312W RPC17P47076 161 aa1.81□□□□□ -2.12
SSF2YDR312W PEX31P53203 462 aa1.81□□□□□ -2.12
SSF2YDR312W ASI3P53983 676 aa1.81□□□□□ -2.12
SSF2YDR312W MRS2Q01926 470 aa1.81□□□□□ -2.12
SSF2YDR312W RRN5Q02983 363 aa1.81□□□□□ -2.12
SSF2YDR312W EMI1Q04406 187 aa1.81□□□□□ -2.12
SSF2YDR312W KRE28Q04431 385 aa1.81□□□□□ -2.12
SSF2YDR312W DXO1Q06349 442 aa1.81□□□□□ -2.12
SSF2YDR312W CTR3Q06686 241 aa1.81□□□□□ -2.12
SSF2YDR312W HRT1Q08273 121 aa1.81□□□□□ -2.12
SSF2YDR312W CSM4Q08955 156 aa1.81□□□□□ -2.12
SSF2YDR312W YPL150WQ12152 901 aa1.81□□□□□ -2.12
SSF2YDR312W MRX4Q12467 430 aa1.81□□□□□ -2.12
SSF2YDR312W ISD11Q6Q560 94 aa1.81□□□□□ -2.12
SSF2YDR312W YPR096CO13587 100 aa1.8□□□□□ -2.12
SSF2YDR312W YCR102CP25608 368 aa1.8□□□□□ -2.12
SSF2YDR312W CAB3P36076 571 aa1.8□□□□□ -2.12
SSF2YDR312W MRPL15P36523 253 aa1.8□□□□□ -2.12
SSF2YDR312W PRS4P38063 326 aaPredicted RBP1.8□□□□□ -2.12
SSF2YDR312W PRS2P38620 318 aaKnown RBP1.8□□□□□ -2.12
SSF2YDR312W TEM1P38987 245 aa1.8□□□□□ -2.12
SSF2YDR312W SUR2P38992 349 aa1.8□□□□□ -2.12
SSF2YDR312W YEL075CP39972 122 aa1.8□□□□□ -2.12
SSF2YDR312W COA1P40452 197 aa1.8□□□□□ -2.12
SSF2YDR312W AVT7P40501 490 aa1.8□□□□□ -2.12
SSF2YDR312W YIL086CP40503 102 aa1.8□□□□□ -2.12
SSF2YDR312W ECO1P43605 281 aa1.8□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 25.7 ms