RNA–Protein interactions for RNA: YDR254W

CHL4, Transcript of Outer kinetochore protein required for chromosome stability, yeast

Gene CHL4, Length 1,377 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CHL4	YDR254W	LSB5	P25369	354 aa		5.11	□□□□□ -1.59
CHL4	YDR254W	PEX34	P25584	144 aa		5.11	□□□□□ -1.59
CHL4	YDR254W	BUB3	P26449	341 aa		5.11	□□□□□ -1.59
CHL4	YDR254W	LEU5	P38702	357 aa		5.11	□□□□□ -1.59
CHL4	YDR254W	ARG2	P40360	574 aa		5.11	□□□□□ -1.59
CHL4	YDR254W	TPN1	P53099	579 aa		5.11	□□□□□ -1.59
CHL4	YDR254W	YPL014W	Q02606	381 aa		5.11	□□□□□ -1.59
CHL4	YDR254W	BET5	Q03630	159 aa		5.11	□□□□□ -1.59
CHL4	YDR254W	TSA2	Q04120	196 aa		5.11	□□□□□ -1.59
CHL4	YDR254W	NKP2	Q06162	153 aa		5.11	□□□□□ -1.59
CHL4	YDR254W	HRD1	Q08109	551 aa		5.11	□□□□□ -1.59
CHL4	YDR254W	AHA1	Q12449	350 aa	Known RBP	5.11	□□□□□ -1.59
CHL4	YDR254W	DRS2	P39524	1355 aa		5.11	□□□□□ -1.59
CHL4	YDR254W	YER145C-A	A0A023PYF4	145 aa		5.1	□□□□□ -1.59
CHL4	YDR254W	REP1	P03871	373 aa		5.1	□□□□□ -1.59
CHL4	YDR254W	PHO13	P19881	312 aa		5.1	□□□□□ -1.59
CHL4	YDR254W	CDC50	P25656	391 aa		5.1	□□□□□ -1.59
CHL4	YDR254W	MRPL9	P31334	269 aa		5.1	□□□□□ -1.59
CHL4	YDR254W	MRP49	P32388	137 aa		5.1	□□□□□ -1.59
CHL4	YDR254W	PHA2	P32452	334 aa		5.1	□□□□□ -1.59
CHL4	YDR254W	HYM1	P32464	399 aa		5.1	□□□□□ -1.59
CHL4	YDR254W	AEP1	P32493	518 aa		5.1	□□□□□ -1.59
CHL4	YDR254W	PDC2	P32896	925 aa		5.1	□□□□□ -1.59
CHL4	YDR254W	HIS7	P33734	552 aa	Known RBP	5.1	□□□□□ -1.59
CHL4	YDR254W	YCR041W	P37265	110 aa		5.1	□□□□□ -1.59
CHL4	YDR254W	GPX2	P38143	162 aa		5.1	□□□□□ -1.59
CHL4	YDR254W	YBR220C	P38318	560 aa		5.1	□□□□□ -1.59
CHL4	YDR254W	YGP1	P38616	354 aa	Known RBP	5.1	□□□□□ -1.59
CHL4	YDR254W	DOG2	P38773	246 aa		5.1	□□□□□ -1.59
CHL4	YDR254W	DOG1	P38774	246 aa		5.1	□□□□□ -1.59
CHL4	YDR254W	SPL2	P38839	148 aa		5.1	□□□□□ -1.59
CHL4	YDR254W	YIL169C	P40442	995 aa		5.1	□□□□□ -1.59
CHL4	YDR254W	YIL060W	P40519	144 aa		5.1	□□□□□ -1.59
CHL4	YDR254W	DFG10	P40526	253 aa		5.1	□□□□□ -1.59
CHL4	YDR254W	SER2	P42941	309 aa		5.1	□□□□□ -1.59
CHL4	YDR254W	IKS1	P47042	667 aa		5.1	□□□□□ -1.59
CHL4	YDR254W	TOS8	P53147	276 aa		5.1	□□□□□ -1.59
CHL4	YDR254W	PRM8	P53174	237 aa		5.1	□□□□□ -1.59
CHL4	YDR254W	SWS2	P53937	143 aa		5.1	□□□□□ -1.59
CHL4	YDR254W	SUR7	P54003	302 aa		5.1	□□□□□ -1.59
CHL4	YDR254W	YPL113C	Q02961	396 aa		5.1	□□□□□ -1.59
CHL4	YDR254W	GPI17	Q04080	534 aa		5.1	□□□□□ -1.59
CHL4	YDR254W	YDR391C	Q04170	232 aa		5.1	□□□□□ -1.59
CHL4	YDR254W	YET2	Q04210	160 aa		5.1	□□□□□ -1.59
CHL4	YDR254W	YMR317W	Q04893	1140 aa		5.1	□□□□□ -1.59
CHL4	YDR254W	YMR320W	Q04897	101 aa		5.1	□□□□□ -1.59
CHL4	YDR254W	COQ10	Q08058	207 aa		5.1	□□□□□ -1.59
CHL4	YDR254W	IRC10	Q08118	586 aa		5.1	□□□□□ -1.59
CHL4	YDR254W	RFM1	Q12192	310 aa		5.1	□□□□□ -1.59
CHL4	YDR254W	TY1B-BR	Q12193	1756 aa		5.1	□□□□□ -1.59
CHL4	YDR254W	TY1B-GR3	Q12316	1755 aa		5.1	□□□□□ -1.59
CHL4	YDR254W	TY1B-OR	Q92393	1755 aa		5.1	□□□□□ -1.59
CHL4	YDR254W	TIR2	P33890	251 aa		5.09	□□□□□ -1.59
CHL4	YDR254W	PEX22	P39718	180 aa		5.09	□□□□□ -1.59
CHL4	YDR254W	FRE4	P53746	719 aa		5.09	□□□□□ -1.59
CHL4	YDR254W	YNL184C	P53876	108 aa		5.09	□□□□□ -1.59
CHL4	YDR254W	CNL1	Q06333	122 aa		5.09	□□□□□ -1.59
CHL4	YDR254W	YRF1-1	P0CX20	1796 aa		5.09	□□□□□ -1.59
CHL4	YDR254W	YRF1-5	P0CX21	1796 aa		5.09	□□□□□ -1.59
CHL4	YDR254W	YRF1-8	P0CX22	1796 aa		5.09	□□□□□ -1.59
CHL4	YDR254W	GPA2	P10823	449 aa		5.08	□□□□□ -1.6
CHL4	YDR254W	ALK2	P32789	676 aa	Predicted RBP	5.08	□□□□□ -1.6
CHL4	YDR254W	PAN3	P36102	679 aa	Predicted RBP	5.08	□□□□□ -1.6
CHL4	YDR254W	RPS20	P38701	121 aa	Known RBP	5.08	□□□□□ -1.6
CHL4	YDR254W	COS8	P38723	381 aa		5.08	□□□□□ -1.6
CHL4	YDR254W	PCL5	P38794	229 aa		5.08	□□□□□ -1.6
CHL4	YDR254W	TRR2	P38816	342 aa		5.08	□□□□□ -1.6
CHL4	YDR254W	AIM2	P39721	246 aa		5.08	□□□□□ -1.6
CHL4	YDR254W	SNM1	P40993	198 aa		5.08	□□□□□ -1.6
CHL4	YDR254W	AVT4	P50944	713 aa		5.08	□□□□□ -1.6
CHL4	YDR254W	UBC12	P52491	188 aa		5.08	□□□□□ -1.6
CHL4	YDR254W	RHO4	Q00246	291 aa		5.08	□□□□□ -1.6
CHL4	YDR254W	LGE1	Q02796	332 aa	Known RBP	5.08	□□□□□ -1.6
CHL4	YDR254W	HPT1	Q04178	221 aa	Known RBP	5.08	□□□□□ -1.6
CHL4	YDR254W	YMR027W	Q04371	470 aa		5.08	□□□□□ -1.6
CHL4	YDR254W	TAF9	Q05027	157 aa		5.08	□□□□□ -1.6
CHL4	YDR254W	PEX30	Q06169	523 aa		5.08	□□□□□ -1.6
CHL4	YDR254W	HRT3	Q12347	344 aa		5.08	□□□□□ -1.6
CHL4	YDR254W	TFC7	Q12415	435 aa		5.08	□□□□□ -1.6
CHL4	YDR254W	UFD4	P33202	1483 aa		5.07	□□□□□ -1.6
CHL4	YDR254W	YCR006C	P25350	157 aa		5.07	□□□□□ -1.6
CHL4	YDR254W	ATG22	P25568	528 aa		5.07	□□□□□ -1.6
CHL4	YDR254W	SFC1	P33303	322 aa		5.07	□□□□□ -1.6
CHL4	YDR254W	SHE2	P36068	246 aa	Known RBP RIP-Chip data	5.07	□□□□□ -1.6	not detected
CHL4	YDR254W	CDC1	P40986	491 aa		5.07	□□□□□ -1.6
CHL4	YDR254W	TES1	P41903	349 aa	Known RBP	5.07	□□□□□ -1.6
CHL4	YDR254W	YNL320W	P42840	284 aa		5.07	□□□□□ -1.6
CHL4	YDR254W	AIM25	P47140	327 aa		5.07	□□□□□ -1.6
CHL4	YDR254W	SOL1	P50278	321 aa		5.07	□□□□□ -1.6
CHL4	YDR254W	FLC3	P53121	802 aa		5.07	□□□□□ -1.6
CHL4	YDR254W	SPG4	Q04438	115 aa		5.07	□□□□□ -1.6
CHL4	YDR254W	ATG39	Q06159	398 aa		5.07	□□□□□ -1.6
CHL4	YDR254W	MCT1	Q12283	360 aa		5.07	□□□□□ -1.6
CHL4	YDR254W	TRM3	Q07527	1436 aa		5.07	□□□□□ -1.6
CHL4	YDR254W	YIL177C	P40434	1758 aa		5.07	□□□□□ -1.6
CHL4	YDR254W	YJL225C	P40889	1758 aa		5.07	□□□□□ -1.6
CHL4	YDR254W	PHO2	P07269	559 aa		5.06	□□□□□ -1.6
CHL4	YDR254W	YKR104W	P0CE69	306 aa		5.06	□□□□□ -1.6
CHL4	YDR254W	SPS100	P13130	326 aa		5.06	□□□□□ -1.6
CHL4	YDR254W	CNB1	P25296	175 aa		5.06	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 162.9 ms