RNA–Protein interactions for RNA: YDL091C

UBX3, Transcript of Subunit of the DSC ubiquitin ligase complex, yeastyeast

Gene UBX3, Length 1,368 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBX3YDL091C RHO3Q00245 231 aaKnown RBP2.08□□□□□ -2.08
UBX3YDL091C YDR476CQ03362 224 aa2.08□□□□□ -2.08
UBX3YDL091C YDR248CQ03786 193 aa2.08□□□□□ -2.08
UBX3YDL091C CSI1Q04368 295 aa2.08□□□□□ -2.08
UBX3YDL091C SEC13Q04491 297 aaKnown RBP2.08□□□□□ -2.08
UBX3YDL091C CDC123Q05791 360 aa2.08□□□□□ -2.08
UBX3YDL091C YLR173WQ06247 608 aa2.08□□□□□ -2.08
UBX3YDL091C CDD1Q06549 142 aa2.08□□□□□ -2.08
UBX3YDL091C YLL007CQ07799 665 aa2.08□□□□□ -2.08
UBX3YDL091C RFU1Q08003 200 aa2.08□□□□□ -2.08
UBX3YDL091C MIM1Q08176 113 aa2.08□□□□□ -2.08
UBX3YDL091C RRP40Q08285 240 aaKnown RBP2.08□□□□□ -2.08
UBX3YDL091C OCA6Q12454 224 aa2.08□□□□□ -2.08
UBX3YDL091C AGC1Q12482 902 aa2.08□□□□□ -2.08
UBX3YDL091C MLP2P40457 1679 aa2.08□□□□□ -2.08
UBX3YDL091C LTE1P07866 1435 aa2.07□□□□□ -2.08
UBX3YDL091C GCN2P15442 1659 aa2.07□□□□□ -2.08
UBX3YDL091C RPL24AP04449 155 aaKnown RBP2.07□□□□□ -2.08
UBX3YDL091C PET54P10834 293 aa2.07□□□□□ -2.08
UBX3YDL091C TFS1P14306 219 aa2.07□□□□□ -2.08
UBX3YDL091C HPR1P17629 752 aaKnown RBP2.07□□□□□ -2.08
UBX3YDL091C SNF6P18888 332 aa2.07□□□□□ -2.08
UBX3YDL091C COQ1P18900 473 aa2.07□□□□□ -2.08
UBX3YDL091C YSR3P23501 404 aa2.07□□□□□ -2.08
UBX3YDL091C TFC1P32367 649 aa2.07□□□□□ -2.08
UBX3YDL091C IMP3P32899 183 aaPredicted RBP2.07□□□□□ -2.08
UBX3YDL091C RPS1AP33442 255 aaKnown RBP2.07□□□□□ -2.08
UBX3YDL091C JEN1P36035 616 aa2.07□□□□□ -2.08
UBX3YDL091C MRPL3P36516 390 aa2.07□□□□□ -2.08
UBX3YDL091C SDH4P37298 181 aa2.07□□□□□ -2.08
UBX3YDL091C AME1P38313 324 aa2.07□□□□□ -2.08
UBX3YDL091C AIM18P38884 321 aa2.07□□□□□ -2.08
UBX3YDL091C CYC2P38909 366 aa2.07□□□□□ -2.08
UBX3YDL091C YER085CP40058 173 aa2.07□□□□□ -2.08
UBX3YDL091C ERG10P41338 398 aaKnown RBP2.07□□□□□ -2.08
UBX3YDL091C BUD13P46947 266 aaPredicted RBP2.07□□□□□ -2.08
UBX3YDL091C UFD1P53044 361 aa2.07□□□□□ -2.08
UBX3YDL091C YGL159WP53110 370 aa2.07□□□□□ -2.08
UBX3YDL091C GET1P53192 235 aa2.07□□□□□ -2.08
UBX3YDL091C MAL13P53338 473 aa2.07□□□□□ -2.08
UBX3YDL091C NOP13P53883 403 aaKnown RBP RIP-Chip data2.07□□□□□ -2.08not detected
UBX3YDL091C YNL134CP53912 376 aaKnown RBP2.07□□□□□ -2.08
UBX3YDL091C YDR249CQ03787 373 aa2.07□□□□□ -2.08
UBX3YDL091C YDR278CQ05612 105 aa2.07□□□□□ -2.08
UBX3YDL091C CSM4Q08955 156 aa2.07□□□□□ -2.08
UBX3YDL091C FYV7Q12247 151 aa2.07□□□□□ -2.08
UBX3YDL091C DCN1Q12395 269 aa2.07□□□□□ -2.08
UBX3YDL091C HAP1P0CE41 1502 aa2.06□□□□□ -2.08
UBX3YDL091C SNA3P14359 133 aa2.06□□□□□ -2.08
UBX3YDL091C RPO26P20435 155 aa2.06□□□□□ -2.08
UBX3YDL091C ATG22P25568 528 aa2.06□□□□□ -2.08
UBX3YDL091C CSG2P35206 410 aa2.06□□□□□ -2.08
UBX3YDL091C YPC1P38298 316 aa2.06□□□□□ -2.08
UBX3YDL091C YHR045WP38775 560 aa2.06□□□□□ -2.08
UBX3YDL091C ECM14P38836 430 aa2.06□□□□□ -2.08
UBX3YDL091C AST2P39945 430 aaKnown RBP2.06□□□□□ -2.08
UBX3YDL091C RFC4P40339 323 aaKnown RBP2.06□□□□□ -2.08
UBX3YDL091C YIL012WP40551 113 aa2.06□□□□□ -2.08
UBX3YDL091C YGR201CP42936 225 aa2.06□□□□□ -2.08
UBX3YDL091C FMP32P43557 207 aa2.06□□□□□ -2.08
UBX3YDL091C YPT32P51996 222 aaKnown RBP2.06□□□□□ -2.08
UBX3YDL091C CPD1P53314 239 aa2.06□□□□□ -2.08
UBX3YDL091C CTF19Q02732 369 aa2.06□□□□□ -2.08
UBX3YDL091C ARL3Q02804 198 aa2.06□□□□□ -2.08
UBX3YDL091C YPL113CQ02961 396 aa2.06□□□□□ -2.08
UBX3YDL091C YMR279CQ03263 540 aa2.06□□□□□ -2.08
UBX3YDL091C EBS1Q03466 884 aaKnown RBP2.06□□□□□ -2.08
UBX3YDL091C RUB1Q03919 77 aa2.06□□□□□ -2.08
UBX3YDL091C YMR226CQ05016 267 aaKnown RBP2.06□□□□□ -2.08
UBX3YDL091C TAF9Q05027 157 aa2.06□□□□□ -2.08
UBX3YDL091C COA4Q05809 96 aa2.06□□□□□ -2.08
UBX3YDL091C PEX30Q06169 523 aa2.06□□□□□ -2.08
UBX3YDL091C NSL1Q12143 216 aa2.06□□□□□ -2.08
UBX3YDL091C YPL150WQ12152 901 aa2.06□□□□□ -2.08
UBX3YDL091C YRA1Q12159 226 aaKnown RBP2.06□□□□□ -2.08
UBX3YDL091C YPR063CQ12160 140 aa2.06□□□□□ -2.08
UBX3YDL091C UTP10P42945 1769 aaKnown RBP2.06□□□□□ -2.08
UBX3YDL091C KRE5P22023 1365 aa2.06□□□□□ -2.08
UBX3YDL091C GDB1Q06625 1536 aa2.05□□□□□ -2.08
UBX3YDL091C NUP159P40477 1460 aa2.05□□□□□ -2.08
UBX3YDL091C HIR3P47171 1648 aa2.05□□□□□ -2.08
UBX3YDL091C CDC28P00546 298 aaKnown RBP2.05□□□□□ -2.08
UBX3YDL091C RAD10P06838 210 aa2.05□□□□□ -2.08
UBX3YDL091C ARO1P08566 1588 aaKnown RBP2.05□□□□□ -2.08
UBX3YDL091C COS2P0CX12 379 aa2.05□□□□□ -2.08
UBX3YDL091C COS3P0CX13 379 aa2.05□□□□□ -2.08
UBX3YDL091C RPS24AP0CX31 135 aaKnown RBP2.05□□□□□ -2.08
UBX3YDL091C RPS24BP0CX32 135 aaKnown RBP2.05□□□□□ -2.08
UBX3YDL091C NHP6BP11633 99 aaKnown RBP2.05□□□□□ -2.08
UBX3YDL091C PRE7P23724 241 aaKnown RBP2.05□□□□□ -2.08
UBX3YDL091C MEK1P24719 497 aaPredicted RBP2.05□□□□□ -2.08
UBX3YDL091C SPT4P32914 102 aaPredicted RBP2.05□□□□□ -2.08
UBX3YDL091C RPT5P33297 434 aaKnown RBP2.05□□□□□ -2.08
UBX3YDL091C YKL070WP36087 169 aa2.05□□□□□ -2.08
UBX3YDL091C PRS2P38620 318 aaKnown RBP2.05□□□□□ -2.08
UBX3YDL091C GRE3P38715 327 aaKnown RBP RIP-Chip data2.05□□□□□ -2.08not detected
UBX3YDL091C NVJ1P38881 321 aa2.05□□□□□ -2.08
UBX3YDL091C CAT8P39113 1433 aa2.05□□□□□ -2.08
UBX3YDL091C GDS1P41913 522 aa2.05□□□□□ -2.08
UBX3YDL091C PRM10P42946 383 aa2.05□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 49.9 ms