RNA–Protein interactions for RNA: YDL042C

SIR2, Transcript of Conserved NAD+ dependent histone deacetylase of the Sirtuin family, yeast

Gene SIR2, Length 1,689 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIR2	YDL042C	SWS2	P53937	143 aa		4.01	□□□□□ -1.77
SIR2	YDL042C	CWC21	Q03375	135 aa	Known RBP	4.01	□□□□□ -1.77
SIR2	YDL042C	RRT12	P25381	491 aa		4	□□□□□ -1.77
SIR2	YDL042C	TKL2	P33315	681 aa		4	□□□□□ -1.77
SIR2	YDL042C	TVP15	Q03860	143 aa		4	□□□□□ -1.77
SIR2	YDL042C	CTS2	Q06350	511 aa		4	□□□□□ -1.77
SIR2	YDL042C	ABP140	Q08641	628 aa	Known RBP	4	□□□□□ -1.77
SIR2	YDL042C	TOR2	P32600	2474 aa	Known RBP	4	□□□□□ -1.77
SIR2	YDL042C	VPS3	P23643	1011 aa		4	□□□□□ -1.77
SIR2	YDL042C	KDX1	P36005	433 aa		4	□□□□□ -1.77
SIR2	YDL042C	SMC2	P38989	1170 aa	Known RBP	4	□□□□□ -1.77
SIR2	YDL042C	YJR012C	P47087	207 aa		4	□□□□□ -1.77
SIR2	YDL042C	MAL13	P53338	473 aa		4	□□□□□ -1.77
SIR2	YDL042C	APJ1	P53940	528 aa		4	□□□□□ -1.77
SIR2	YDL042C	AI5_BETA	Q9ZZX0	354 aa		4	□□□□□ -1.77
SIR2	YDL042C	TRM7	P38238	310 aa	Known RBP	3.99	□□□□□ -1.77
SIR2	YDL042C	MOB1	P40484	314 aa		3.99	□□□□□ -1.77
SIR2	YDL042C	RPL10	P41805	221 aa	Known RBP	3.99	□□□□□ -1.77
SIR2	YDL042C	YNL095C	P53932	642 aa		3.99	□□□□□ -1.77
SIR2	YDL042C	RRN5	Q02983	363 aa		3.99	□□□□□ -1.77
SIR2	YDL042C	COY1	P34237	679 aa		3.98	□□□□□ -1.77
SIR2	YDL042C	CSG2	P35206	410 aa		3.98	□□□□□ -1.77
SIR2	YDL042C	YHI9	P38765	294 aa		3.98	□□□□□ -1.77
SIR2	YDL042C	PRR2	Q12310	699 aa		3.98	□□□□□ -1.77
SIR2	YDL042C	HEK2	P38199	381 aa	Known RBP RIP-Chip data	3.97	□□□□□ -1.77	not detected
SIR2	YDL042C	BUD13	P46947	266 aa	Predicted RBP	3.97	□□□□□ -1.77
SIR2	YDL042C	GPM2	Q12008	311 aa		3.97	□□□□□ -1.77
SIR2	YDL042C	RAD3	P06839	778 aa		3.97	□□□□□ -1.77
SIR2	YDL042C	PHO13	P19881	312 aa		3.97	□□□□□ -1.77
SIR2	YDL042C	PRS2	P38620	318 aa	Known RBP	3.97	□□□□□ -1.77
SIR2	YDL042C	MZM1	Q03429	123 aa	Predicted RBP	3.97	□□□□□ -1.77
SIR2	YDL042C	YLR173W	Q06247	608 aa		3.97	□□□□□ -1.77
SIR2	YDL042C	CWP1	P28319	239 aa		3.96	□□□□□ -1.78
SIR2	YDL042C	ARN2	P38724	620 aa		3.96	□□□□□ -1.78
SIR2	YDL042C	BIG1	P38813	335 aa		3.96	□□□□□ -1.78
SIR2	YDL042C	MIG2	P53035	382 aa		3.96	□□□□□ -1.78
SIR2	YDL042C	GRX3	Q03835	250 aa		3.96	□□□□□ -1.78
SIR2	YDL042C	MRX4	Q12467	430 aa		3.96	□□□□□ -1.78
SIR2	YDL042C	QRI5	P32344	111 aa		3.95	□□□□□ -1.78
SIR2	YDL042C	DSN1	P40568	576 aa		3.95	□□□□□ -1.78
SIR2	YDL042C	ALG9	P53868	555 aa	Known RBP	3.95	□□□□□ -1.78
SIR2	YDL042C	YPL039W	Q03080	316 aa		3.95	□□□□□ -1.78
SIR2	YDL042C	SDO1	Q07953	250 aa	Known RBP	3.95	□□□□□ -1.78
SIR2	YDL042C	YPS3	Q12303	508 aa		3.95	□□□□□ -1.78
SIR2	YDL042C	CDC33	P07260	213 aa	Known RBP	3.94	□□□□□ -1.78
SIR2	YDL042C	PEX34	P25584	144 aa		3.94	□□□□□ -1.78
SIR2	YDL042C	PRS4	P38063	326 aa	Predicted RBP	3.94	□□□□□ -1.78
SIR2	YDL042C	YHL049C	P38722	271 aa		3.94	□□□□□ -1.78
SIR2	YDL042C	SUR2	P38992	349 aa		3.94	□□□□□ -1.78
SIR2	YDL042C	SPT8	P38915	602 aa		3.94	□□□□□ -1.78
SIR2	YDL042C	YEL075C	P39972	122 aa		3.94	□□□□□ -1.78
SIR2	YDL042C	AVT2	P39981	480 aa		3.94	□□□□□ -1.78
SIR2	YDL042C	BNA6	P43619	295 aa		3.94	□□□□□ -1.78
SIR2	YDL042C	SLX9	P53251	210 aa	Predicted RBP	3.94	□□□□□ -1.78
SIR2	YDL042C	ARO80	Q04052	950 aa		3.94	□□□□□ -1.78
SIR2	YDL042C	YDR114C	Q04597	100 aa		3.94	□□□□□ -1.78
SIR2	YDL042C	PEX10	Q05568	337 aa		3.94	□□□□□ -1.78
SIR2	YDL042C	YPL119C-A	Q3E751	87 aa		3.94	□□□□□ -1.78
SIR2	YDL042C	FMP27	Q06179	2628 aa		3.93	□□□□□ -1.78
SIR2	YDL042C	SPO73	P40031	143 aa		3.93	□□□□□ -1.78
SIR2	YDL042C	YDR209C	Q03480	137 aa		3.93	□□□□□ -1.78
SIR2	YDL042C	YBL112C	Q3E7Y4	105 aa		3.93	□□□□□ -1.78
SIR2	YDL042C	YEL009C-A	A0A023PZF2	135 aa		3.92	□□□□□ -1.78
SIR2	YDL042C	SNZ3	P43545	298 aa		3.92	□□□□□ -1.78
SIR2	YDL042C	OST3	P48439	350 aa		3.92	□□□□□ -1.78
SIR2	YDL042C	SNZ2	P53824	298 aa		3.92	□□□□□ -1.78
SIR2	YDL042C	YMR166C	Q03829	368 aa		3.92	□□□□□ -1.78
SIR2	YDL042C	YOL019W	Q08157	551 aa		3.92	□□□□□ -1.78
SIR2	YDL042C	TIM22	Q12328	207 aa		3.92	□□□□□ -1.78
SIR2	YDL042C	MED4	Q12343	284 aa		3.92	□□□□□ -1.78
SIR2	YDL042C	JIP3	O13555	125 aa		3.91	□□□□□ -1.78
SIR2	YDL042C	COS2	P0CX12	379 aa		3.91	□□□□□ -1.78
SIR2	YDL042C	COS3	P0CX13	379 aa		3.91	□□□□□ -1.78
SIR2	YDL042C	ZWF1	P11412	505 aa	Known RBP	3.91	□□□□□ -1.78
SIR2	YDL042C	ECM13	P38195	257 aa		3.91	□□□□□ -1.78
SIR2	YDL042C	HOP2	P53187	214 aa		3.91	□□□□□ -1.78
SIR2	YDL042C	YOR029W	Q12243	111 aa		3.91	□□□□□ -1.78
SIR2	YDL042C	ISD11	Q6Q560	94 aa		3.91	□□□□□ -1.78
SIR2	YDL042C	YHR045W	P38775	560 aa		3.9	□□□□□ -1.78
SIR2	YDL042C	SMB1	P40018	196 aa	Known RBP	3.9	□□□□□ -1.78
SIR2	YDL042C	YER189W	P40104	122 aa		3.9	□□□□□ -1.78
SIR2	YDL042C	AAH1	P53909	347 aa		3.9	□□□□□ -1.78
SIR2	YDL042C	PLB3	Q08108	686 aa		3.9	□□□□□ -1.78
SIR2	YDL042C	EMP46	Q12396	444 aa		3.9	□□□□□ -1.78
SIR2	YDL042C	TEL1	P38110	2787 aa		3.9	□□□□□ -1.78
SIR2	YDL042C	SPG3	Q04398	127 aa	Predicted RBP	3.9	□□□□□ -1.79
SIR2	YDL042C	YDR278C	Q05612	105 aa		3.9	□□□□□ -1.79
SIR2	YDL042C	RFM1	Q12192	310 aa		3.9	□□□□□ -1.79
SIR2	YDL042C	MET2	P08465	486 aa		3.89	□□□□□ -1.79
SIR2	YDL042C	FPR1	P20081	114 aa	Known RBP	3.89	□□□□□ -1.79
SIR2	YDL042C	NIF3	P53081	288 aa		3.89	□□□□□ -1.79
SIR2	YDL042C	DAS2	Q12084	232 aa		3.89	□□□□□ -1.79
SIR2	YDL042C	YPR096C	O13587	100 aa		3.88	□□□□□ -1.79
SIR2	YDL042C	QCR6	P00127	147 aa		3.88	□□□□□ -1.79
SIR2	YDL042C	JEN1	P36035	616 aa		3.88	□□□□□ -1.79
SIR2	YDL042C	BEM2	P39960	2167 aa	Known RBP	3.88	□□□□□ -1.79
SIR2	YDL042C	ERG10	P41338	398 aa	Known RBP	3.88	□□□□□ -1.79
SIR2	YDL042C	YJL144W	P47009	104 aa		3.88	□□□□□ -1.79
SIR2	YDL042C	GLG2	P47011	380 aa		3.88	□□□□□ -1.79
SIR2	YDL042C	YGL088W	P53151	121 aa		3.88	□□□□□ -1.79

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