RNA–Protein interactions for RNA: YBR258C

SHG1, Transcript of Subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SHG1, Length 429 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHG1YBR258C DPP1Q05521 289 aa2.22□□□□□ -2.05
SHG1YBR258C GIS3Q12418 502 aa2.22□□□□□ -2.05
SHG1YBR258C FMP16Q12497 93 aa2.22□□□□□ -2.05
SHG1YBR258C YOL163WP0CF20 169 aa2.21□□□□□ -2.06
SHG1YBR258C PRE7P23724 241 aaKnown RBP2.21□□□□□ -2.06
SHG1YBR258C SPT4P32914 102 aaPredicted RBP2.21□□□□□ -2.06
SHG1YBR258C YGP1P38616 354 aaKnown RBP2.21□□□□□ -2.06
SHG1YBR258C SMC2P38989 1170 aaKnown RBP2.21□□□□□ -2.06
SHG1YBR258C YIA6P40556 373 aa2.21□□□□□ -2.06
SHG1YBR258C SYS1P41544 203 aa2.21□□□□□ -2.06
SHG1YBR258C MND1P53102 219 aa2.21□□□□□ -2.06
SHG1YBR258C ARC18Q05933 178 aaKnown RBP2.21□□□□□ -2.06
SHG1YBR258C YPR063CQ12160 140 aa2.21□□□□□ -2.06
SHG1YBR258C RFM1Q12192 310 aa2.21□□□□□ -2.06
SHG1YBR258C YPS3Q12303 508 aa2.21□□□□□ -2.06
SHG1YBR258C MRPL23Q12487 163 aaPredicted RBP2.21□□□□□ -2.06
SHG1YBR258C COX5AP00424 153 aa2.2□□□□□ -2.06
SHG1YBR258C PET494P07390 489 aaPredicted RBP2.2□□□□□ -2.06
SHG1YBR258C RPC40P07703 335 aaKnown RBP2.2□□□□□ -2.06
SHG1YBR258C RPS23AP0CX29 145 aaKnown RBP2.2□□□□□ -2.06
SHG1YBR258C RPS23BP0CX30 145 aa2.2□□□□□ -2.06
SHG1YBR258C MET16P18408 261 aaPredicted RBP2.2□□□□□ -2.06
SHG1YBR258C CSM1P25651 190 aa2.2□□□□□ -2.06
SHG1YBR258C PET100P38958 111 aa2.2□□□□□ -2.06
SHG1YBR258C NPT1P39683 429 aaKnown RBP2.2□□□□□ -2.06
SHG1YBR258C KRE29P40026 464 aa2.2□□□□□ -2.06
SHG1YBR258C AVT6P40074 448 aa2.2□□□□□ -2.06
SHG1YBR258C OSH6Q02201 448 aa2.2□□□□□ -2.06
SHG1YBR258C DXO1Q06349 442 aa2.2□□□□□ -2.06
SHG1YBR258C TDH1P00360 332 aaKnown RBP2.19□□□□□ -2.06
SHG1YBR258C GAL7P08431 366 aa2.19□□□□□ -2.06
SHG1YBR258C ZWF1P11412 505 aaKnown RBP2.19□□□□□ -2.06
SHG1YBR258C CYC2P38909 366 aa2.19□□□□□ -2.06
SHG1YBR258C EDC3P39998 551 aaKnown RBP2.19□□□□□ -2.06
SHG1YBR258C GPI8P49018 411 aa2.19□□□□□ -2.06
SHG1YBR258C NBP1P52919 319 aaPredicted RBP2.19□□□□□ -2.06
SHG1YBR258C TIM8P57744 87 aa2.19□□□□□ -2.06
SHG1YBR258C YMR209CQ03648 457 aa2.19□□□□□ -2.06
SHG1YBR258C ARO80Q04052 950 aa2.19□□□□□ -2.06
SHG1YBR258C VBA1Q04301 562 aa2.19□□□□□ -2.06
SHG1YBR258C GRX8Q05926 109 aa2.19□□□□□ -2.06
SHG1YBR258C LOA1Q06508 300 aa2.19□□□□□ -2.06
SHG1YBR258C POM33Q12164 279 aa2.19□□□□□ -2.06
SHG1YBR258C TDH2P00358 332 aaKnown RBP2.18□□□□□ -2.06
SHG1YBR258C HIS1P00498 297 aaKnown RBP2.18□□□□□ -2.06
SHG1YBR258C YAK1P14680 807 aa2.18□□□□□ -2.06
SHG1YBR258C IMP1P28627 190 aa2.18□□□□□ -2.06
SHG1YBR258C PEX3P28795 441 aa2.18□□□□□ -2.06
SHG1YBR258C SDH4P37298 181 aa2.18□□□□□ -2.06
SHG1YBR258C YEL073CP39974 107 aa2.18□□□□□ -2.06
SHG1YBR258C YER188WP40103 239 aa2.18□□□□□ -2.06
SHG1YBR258C BUD13P46947 266 aaPredicted RBP2.18□□□□□ -2.06
SHG1YBR258C SDC1Q03323 175 aa2.18□□□□□ -2.06
SHG1YBR258C VPS60Q03390 229 aa2.18□□□□□ -2.06
SHG1YBR258C TVP15Q03860 143 aa2.18□□□□□ -2.06
SHG1YBR258C IES3Q12345 250 aa2.18□□□□□ -2.06
SHG1YBR258C YAL064W-BO13512 126 aa2.17□□□□□ -2.06
SHG1YBR258C RPS3P05750 240 aaKnown RBP2.17□□□□□ -2.06
SHG1YBR258C PPQ1P32945 549 aa2.17□□□□□ -2.06
SHG1YBR258C RPS27AP35997 82 aaKnown RBP2.17□□□□□ -2.06
SHG1YBR258C TRM7P38238 310 aaKnown RBP2.17□□□□□ -2.06
SHG1YBR258C RPS27BP38711 82 aa2.17□□□□□ -2.06
SHG1YBR258C YHI9P38765 294 aa2.17□□□□□ -2.06
SHG1YBR258C SEN34P39707 275 aa2.17□□□□□ -2.06
SHG1YBR258C YEL075CP39972 122 aa2.17□□□□□ -2.06
SHG1YBR258C AVT7P40501 490 aa2.17□□□□□ -2.06
SHG1YBR258C MRX5P47007 382 aa2.17□□□□□ -2.06
SHG1YBR258C YJL144WP47009 104 aa2.17□□□□□ -2.06
SHG1YBR258C GMC2Q06201 188 aa2.17□□□□□ -2.06
SHG1YBR258C YOL107WQ12239 342 aa2.17□□□□□ -2.06
SHG1YBR258C PRR2Q12310 699 aa2.17□□□□□ -2.06
SHG1YBR258C ATG5Q12380 294 aa2.17□□□□□ -2.06
SHG1YBR258C RRP36Q12481 300 aaPredicted RBP2.17□□□□□ -2.06
SHG1YBR258C SLH1P53327 1967 aaKnown RBP2.16□□□□□ -2.06
SHG1YBR258C JIP3O13555 125 aa2.16□□□□□ -2.06
SHG1YBR258C YSR3P23501 404 aa2.16□□□□□ -2.06
SHG1YBR258C ALK2P32789 676 aaPredicted RBP2.16□□□□□ -2.06
SHG1YBR258C POP8P38208 133 aa2.16□□□□□ -2.06
SHG1YBR258C RCY1P39531 840 aa2.16□□□□□ -2.06
SHG1YBR258C YMR144WP40214 342 aaKnown RBP2.16□□□□□ -2.06
SHG1YBR258C ECO1P43605 281 aa2.16□□□□□ -2.06
SHG1YBR258C OST3P48439 350 aa2.16□□□□□ -2.06
SHG1YBR258C KAP114P53067 1004 aa2.16□□□□□ -2.06
SHG1YBR258C CPD1P53314 239 aa2.16□□□□□ -2.06
SHG1YBR258C CDC14Q00684 551 aa2.16□□□□□ -2.06
SHG1YBR258C SPP2Q02521 185 aa2.16□□□□□ -2.06
SHG1YBR258C NNT1Q05874 261 aa2.16□□□□□ -2.06
SHG1YBR258C SEC10Q06245 871 aa2.16□□□□□ -2.06
SHG1YBR258C YLL007CQ07799 665 aa2.16□□□□□ -2.06
SHG1YBR258C EMP46Q12396 444 aa2.16□□□□□ -2.06
SHG1YBR258C YOS9Q99220 542 aa2.16□□□□□ -2.06
SHG1YBR258C SFC1P33303 322 aa2.15□□□□□ -2.07
SHG1YBR258C RTT105P40063 208 aa2.15□□□□□ -2.07
SHG1YBR258C YAR1P46683 200 aa2.15□□□□□ -2.07
SHG1YBR258C RSM27P53305 110 aa2.15□□□□□ -2.07
SHG1YBR258C SWT21P53873 357 aaPredicted RBP2.15□□□□□ -2.07
SHG1YBR258C KAP95Q06142 861 aaKnown RBP2.15□□□□□ -2.07
SHG1YBR258C SFH1Q06168 426 aa2.15□□□□□ -2.07
SHG1YBR258C HRT1Q08273 121 aa2.15□□□□□ -2.07
SHG1YBR258C MRX4Q12467 430 aa2.15□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms