RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 MYO7AQ13402 2215 aa11.85□□□□□ -0.51
SSBP4-215ENST00000625926 CFAP54Q96N23 3096 aa11.85□□□□□ -0.51
SSBP4-215ENST00000625926 TRAK2O60296 914 aa11.85□□□□□ -0.51
SSBP4-215ENST00000625926 RFPL2O75678 378 aa11.85□□□□□ -0.51
SSBP4-215ENST00000625926 RPL9P32969 192 aaKnown RBP11.85□□□□□ -0.51
SSBP4-215ENST00000625926 MATR3P43243 847 aaKnown RBP eCLIP11.85□□□□□ -0.51
SSBP4-215ENST00000625926 MRE11P49959 708 aa11.85□□□□□ -0.51
SSBP4-215ENST00000625926 ZNF131P52739 623 aa11.85□□□□□ -0.51
SSBP4-215ENST00000625926 CEBPZQ03701 1054 aaKnown RBP11.85□□□□□ -0.51
SSBP4-215ENST00000625926 MCL1Q07820 350 aa11.85□□□□□ -0.51
SSBP4-215ENST00000625926 MTMR3Q13615 1198 aa11.85□□□□□ -0.51
SSBP4-215ENST00000625926 NOLC1Q14978 699 aaKnown RBP eCLIP11.85□□□□□ -0.51
SSBP4-215ENST00000625926 PSMD5Q16401 504 aa11.85□□□□□ -0.51
SSBP4-215ENST00000625926 SPECC1Q5M775 1068 aa11.85□□□□□ -0.51
SSBP4-215ENST00000625926 FAM173BQ6P4H8 233 aa11.85□□□□□ -0.51
SSBP4-215ENST00000625926 UBALD2Q8IYN6 164 aa11.85□□□□□ -0.51
SSBP4-215ENST00000625926 FEZF2Q8TBJ5 459 aa11.85□□□□□ -0.51
SSBP4-215ENST00000625926 SMG7Q92540 1137 aaKnown RBP11.85□□□□□ -0.51
SSBP4-215ENST00000625926 STAMQ92783 540 aa11.85□□□□□ -0.51
SSBP4-215ENST00000625926 BICD1Q96G01 975 aa11.85□□□□□ -0.51
SSBP4-215ENST00000625926 EPSTI1Q96J88 318 aa11.85□□□□□ -0.51
SSBP4-215ENST00000625926 ZMAT2Q96NC0 199 aaKnown RBP11.85□□□□□ -0.51
SSBP4-215ENST00000625926 ZHX3Q9H4I2 956 aa11.85□□□□□ -0.51
SSBP4-215ENST00000625926 ZSCAN16Q9H4T2 348 aaPredicted RBP11.85□□□□□ -0.51
SSBP4-215ENST00000625926 PIDD1Q9HB75 910 aa11.85□□□□□ -0.51
SSBP4-215ENST00000625926 PARVGQ9HBI0 331 aa11.85□□□□□ -0.51
SSBP4-215ENST00000625926 GOLGA2P5Q9HBQ8 144 aa11.85□□□□□ -0.51
SSBP4-215ENST00000625926 WDR6Q9NNW5 1121 aaKnown RBP11.85□□□□□ -0.51
SSBP4-215ENST00000625926 ZDHHC7Q9NXF8 308 aa11.85□□□□□ -0.51
SSBP4-215ENST00000625926 CNTN3Q9P232 1028 aa11.85□□□□□ -0.51
SSBP4-215ENST00000625926 FBXO2Q9UK22 296 aaPredicted RBP11.85□□□□□ -0.51
SSBP4-215ENST00000625926 TBX20Q9UMR3 447 aa11.85□□□□□ -0.51
SSBP4-215ENST00000625926 MTMR6Q9Y217 621 aa11.85□□□□□ -0.51
SSBP4-215ENST00000625926 PODXLO00592 558 aa11.84□□□□□ -0.51
SSBP4-215ENST00000625926 STX6O43752 255 aa11.84□□□□□ -0.51
SSBP4-215ENST00000625926 TBCAO75347 108 aaKnown RBP11.84□□□□□ -0.51
SSBP4-215ENST00000625926 ZMYND10O75800 440 aa11.84□□□□□ -0.51
SSBP4-215ENST00000625926 PAPLNO95428 1278 aa11.84□□□□□ -0.51
SSBP4-215ENST00000625926 CLTAP09496 248 aa11.84□□□□□ -0.51
SSBP4-215ENST00000625926 FGFR3P22607 806 aa11.84□□□□□ -0.51
SSBP4-215ENST00000625926 IGFBP6P24592 240 aaPredicted RBP11.84□□□□□ -0.51
SSBP4-215ENST00000625926 ABCD1P33897 745 aa11.84□□□□□ -0.51
SSBP4-215ENST00000625926 TXLNAP40222 546 aa11.84□□□□□ -0.51
SSBP4-215ENST00000625926 LIG4P49917 911 aa11.84□□□□□ -0.51
SSBP4-215ENST00000625926 SOX4Q06945 474 aaPredicted RBP11.84□□□□□ -0.51
SSBP4-215ENST00000625926 KYAT1Q16773 422 aa11.84□□□□□ -0.51
SSBP4-215ENST00000625926 SLC10A6Q3KNW5 377 aa11.84□□□□□ -0.51
SSBP4-215ENST00000625926 SEZ6Q53EL9 994 aa11.84□□□□□ -0.51
SSBP4-215ENST00000625926 CD300LGQ6UXG3 332 aa11.84□□□□□ -0.51
SSBP4-215ENST00000625926 USP49Q70CQ1 688 aa11.84□□□□□ -0.51
SSBP4-215ENST00000625926 KRI1Q8N9T8 703 aaKnown RBP11.84□□□□□ -0.51
SSBP4-215ENST00000625926 ZNF707Q96C28 371 aaPredicted RBP11.84□□□□□ -0.51
SSBP4-215ENST00000625926 PRKD2Q9BZL6 878 aa11.84□□□□□ -0.51
SSBP4-215ENST00000625926 PLEKHA5Q9HAU0 1116 aa11.84□□□□□ -0.51
SSBP4-215ENST00000625926 BRWD1Q9NSI6 2320 aa11.84□□□□□ -0.51
SSBP4-215ENST00000625926 K7ENM7 598 aa11.83□□□□□ -0.52
SSBP4-215ENST00000625926 HNRNPDLO14979 420 aaKnown RBP11.83□□□□□ -0.52
SSBP4-215ENST00000625926 ASGR2P07307 311 aa11.83□□□□□ -0.52
SSBP4-215ENST00000625926 OR1D2P34982 312 aa11.83□□□□□ -0.52
SSBP4-215ENST00000625926 BRCC3P46736 316 aa11.83□□□□□ -0.52
SSBP4-215ENST00000625926 RAB33AQ14088 237 aa11.83□□□□□ -0.52
SSBP4-215ENST00000625926 SLC39A14Q15043 492 aa11.83□□□□□ -0.52
SSBP4-215ENST00000625926 LIN9Q5TKA1 542 aa11.83□□□□□ -0.52
SSBP4-215ENST00000625926 RRAGBQ5VZM2 374 aa11.83□□□□□ -0.52
SSBP4-215ENST00000625926 ANKS3Q6ZW76 656 aa11.83□□□□□ -0.52
SSBP4-215ENST00000625926 SUGP1Q8IWZ8 645 aaKnown RBP11.83□□□□□ -0.52
SSBP4-215ENST00000625926 FBXL6Q8N531 539 aa11.83□□□□□ -0.52
SSBP4-215ENST00000625926 C3orf58Q8NDZ4 430 aa11.83□□□□□ -0.52
SSBP4-215ENST00000625926 SNX21Q969T3 373 aa11.83□□□□□ -0.52
SSBP4-215ENST00000625926 C18orf25Q96B23 403 aaPredicted RBP11.83□□□□□ -0.52
SSBP4-215ENST00000625926 ASIC4Q96FT7 647 aa11.83□□□□□ -0.52
SSBP4-215ENST00000625926 CLIC6Q96NY7 704 aa11.83□□□□□ -0.52
SSBP4-215ENST00000625926 USP28Q96RU2 1077 aa11.83□□□□□ -0.52
SSBP4-215ENST00000625926 KCNH6Q9H252 994 aa11.83□□□□□ -0.52
SSBP4-215ENST00000625926 MTRRQ9UBK8 725 aa11.83□□□□□ -0.52
SSBP4-215ENST00000625926 STK17AQ9UEE5 414 aa11.83□□□□□ -0.52
SSBP4-215ENST00000625926 FBXW11Q9UKB1 542 aa11.83□□□□□ -0.52
SSBP4-215ENST00000625926 NUB1Q9Y5A7 615 aa11.83□□□□□ -0.52
SSBP4-215ENST00000625926 BACE2Q9Y5Z0 518 aa11.83□□□□□ -0.52
SSBP4-215ENST00000625926 MORC2Q9Y6X9 1032 aaPredicted RBP11.83□□□□□ -0.52
SSBP4-215ENST00000625926 WDR81Q562E7 1941 aa11.83□□□□□ -0.52
SSBP4-215ENST00000625926 ARID2Q68CP9 1835 aa11.82□□□□□ -0.52
SSBP4-215ENST00000625926 I3L4J1 428 aa11.82□□□□□ -0.52
SSBP4-215ENST00000625926 SYN3O14994 580 aa11.82□□□□□ -0.52
SSBP4-215ENST00000625926 MEFVO15553 781 aaPredicted RBP11.82□□□□□ -0.52
SSBP4-215ENST00000625926 ADAM12O43184 909 aa11.82□□□□□ -0.52
SSBP4-215ENST00000625926 PIGRP01833 764 aa11.82□□□□□ -0.52
SSBP4-215ENST00000625926 HNRNPA1P09651 372 aaKnown RBP eCLIP11.82□□□□□ -0.52
SSBP4-215ENST00000625926 TKTP29401 623 aaKnown RBP11.82□□□□□ -0.52
SSBP4-215ENST00000625926 GBP2P32456 591 aaPredicted RBP11.82□□□□□ -0.52
SSBP4-215ENST00000625926 GTF2BQ00403 316 aa11.82□□□□□ -0.52
SSBP4-215ENST00000625926 UVSSAQ2YD98 709 aa11.82□□□□□ -0.52
SSBP4-215ENST00000625926 PPM1LQ5SGD2 360 aa11.82□□□□□ -0.52
SSBP4-215ENST00000625926 SV2BQ7L1I2 683 aa11.82□□□□□ -0.52
SSBP4-215ENST00000625926 RTL10Q7L3V2 364 aa11.82□□□□□ -0.52
SSBP4-215ENST00000625926 HAPLN2Q9GZV7 340 aa11.82□□□□□ -0.52
SSBP4-215ENST00000625926 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.82□□□□□ -0.521e-6■■■■□ 19.3
SSBP4-215ENST00000625926 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.82□□□□□ -0.52
SSBP4-215ENST00000625926 CDY1Q9Y6F8 540 aa11.82□□□□□ -0.52
SSBP4-215ENST00000625926 CLUHO75153 1309 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms