RNA–Protein interactions for RNA: ENST00000611127.4

FAM228B-205, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS P3 TSL 5 BASIC

Gene FAM228B, Length 975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-205ENST00000611127 SYNE3Q6ZMZ3 975 aa8.85□□□□□ -0.99
FAM228B-205ENST00000611127 SEPT14Q6ZU15 432 aa8.85□□□□□ -0.99
FAM228B-205ENST00000611127 FAM126BQ8IXS8 530 aa8.85□□□□□ -0.99
FAM228B-205ENST00000611127 RRP36Q96EU6 259 aaKnown RBP8.85□□□□□ -0.99
FAM228B-205ENST00000611127 NEK1Q96PY6 1258 aa8.85□□□□□ -0.99
FAM228B-205ENST00000611127 MTG1Q9BT17 334 aaPredicted RBP8.85□□□□□ -0.99
FAM228B-205ENST00000611127 SPZ1Q9BXG8 430 aa8.85□□□□□ -0.99
FAM228B-205ENST00000611127 EPB41L4BQ9H329 900 aa8.85□□□□□ -0.99
FAM228B-205ENST00000611127 BRMS1Q9HCU9 246 aa8.85□□□□□ -0.99
FAM228B-205ENST00000611127 PXMP2Q9NR77 195 aa8.85□□□□□ -0.99
FAM228B-205ENST00000611127 SEC63Q9UGP8 760 aaKnown RBP8.85□□□□□ -0.99
FAM228B-205ENST00000611127 PCDHGB7Q9Y5F8 929 aa8.85□□□□□ -0.99
FAM228B-205ENST00000611127 GRIN2DO15399 1336 aa8.84□□□□□ -0.99
FAM228B-205ENST00000611127 WASH4PA8MWX3 477 aa8.84□□□□□ -0.99
FAM228B-205ENST00000611127 GH1P01241 217 aa8.84□□□□□ -0.99
FAM228B-205ENST00000611127 HMGB1P09429 215 aaKnown RBP8.84□□□□□ -0.99
FAM228B-205ENST00000611127 SUPT20HL2P0C7V6 817 aa8.84□□□□□ -0.99
FAM228B-205ENST00000611127 HOXA13P31271 388 aaPredicted RBP8.84□□□□□ -0.99
FAM228B-205ENST00000611127 PPIGQ13427 754 aaKnown RBP eCLIP8.84□□□□□ -0.99
FAM228B-205ENST00000611127 SHHQ15465 462 aa8.84□□□□□ -0.99
FAM228B-205ENST00000611127 ARSHQ5FYA8 562 aa8.84□□□□□ -0.99
FAM228B-205ENST00000611127 CCDC62Q6P9F0 684 aa8.84□□□□□ -0.99
FAM228B-205ENST00000611127 KCNV1Q6PIU1 500 aa8.84□□□□□ -0.99
FAM228B-205ENST00000611127 RNF111Q6ZNA4 994 aa8.84□□□□□ -0.99
FAM228B-205ENST00000611127 SYDE1Q6ZW31 735 aaPredicted RBP8.84□□□□□ -0.99
FAM228B-205ENST00000611127 SGMS1Q86VZ5 419 aa8.84□□□□□ -0.99
FAM228B-205ENST00000611127 TMEM199Q8N511 208 aa8.84□□□□□ -0.99
FAM228B-205ENST00000611127 PDCD2LQ9BRP1 358 aa8.84□□□□□ -0.99
FAM228B-205ENST00000611127 MYL10Q9BUA6 226 aa8.84□□□□□ -0.99
FAM228B-205ENST00000611127 SPON2Q9BUD6 331 aa8.84□□□□□ -0.99
FAM228B-205ENST00000611127 NSUN3Q9H649 340 aaKnown RBP8.84□□□□□ -0.99
FAM228B-205ENST00000611127 LRRN2O75325 713 aa8.83□□□□□ -1
FAM228B-205ENST00000611127 ARIH2O95376 493 aa8.83□□□□□ -1
FAM228B-205ENST00000611127 TGFB3P10600 412 aa8.83□□□□□ -1
FAM228B-205ENST00000611127 MYCLP12524 364 aaPredicted RBP8.83□□□□□ -1
FAM228B-205ENST00000611127 CASTP20810 708 aaKnown RBP8.83□□□□□ -1
FAM228B-205ENST00000611127 CCND2P30279 289 aa8.83□□□□□ -1
FAM228B-205ENST00000611127 ZNF165P49910 485 aa8.83□□□□□ -1
FAM228B-205ENST00000611127 PSMC6P62333 389 aa8.83□□□□□ -1
FAM228B-205ENST00000611127 EXOSC10Q01780 885 aaKnown RBP8.83□□□□□ -1
FAM228B-205ENST00000611127 APOBRQ0VD83 1088 aa8.83□□□□□ -1
FAM228B-205ENST00000611127 PGM5Q15124 567 aa8.83□□□□□ -1
FAM228B-205ENST00000611127 LY6KQ17RY6 165 aa8.83□□□□□ -1
FAM228B-205ENST00000611127 C9orf50Q5SZB4 431 aa8.83□□□□□ -1
FAM228B-205ENST00000611127 FAM109BQ6ICB4 259 aaPredicted RBP8.83□□□□□ -1
FAM228B-205ENST00000611127 IRF2BP1Q8IU81 584 aa8.83□□□□□ -1
FAM228B-205ENST00000611127 SRBD1Q8N5C6 995 aaKnown RBP8.83□□□□□ -1
FAM228B-205ENST00000611127 DEFB123Q8N688 67 aa8.83□□□□□ -1
FAM228B-205ENST00000611127 ANKS4BQ8N8V4 417 aa8.83□□□□□ -1
FAM228B-205ENST00000611127 FANCBQ8NB91 859 aa8.83□□□□□ -1
FAM228B-205ENST00000611127 DAGLBQ8NCG7 672 aa8.83□□□□□ -1
FAM228B-205ENST00000611127 PIBF1Q8WXW3 757 aa8.83□□□□□ -1
FAM228B-205ENST00000611127 COPS5Q92905 334 aa8.83□□□□□ -1
FAM228B-205ENST00000611127 CUL5Q93034 780 aa8.83□□□□□ -1
FAM228B-205ENST00000611127 NT5C1AQ9BXI3 368 aa8.83□□□□□ -1
FAM228B-205ENST00000611127 SLC6A17Q9H1V8 727 aa8.83□□□□□ -1
FAM228B-205ENST00000611127 ALDH8A1Q9H2A2 487 aaPredicted RBP8.83□□□□□ -1
FAM228B-205ENST00000611127 HIPK3Q9H422 1215 aa8.83□□□□□ -1
FAM228B-205ENST00000611127 MRVI1Q9Y6F6 885 aa8.83□□□□□ -1
FAM228B-205ENST00000611127 RANBP2P49792 3224 aaKnown RBP8.83□□□□□ -1
FAM228B-205ENST00000611127 LAMA4Q16363 1823 aa8.82□□□□□ -1
FAM228B-205ENST00000611127 B4GALT4O60513 344 aa8.82□□□□□ -1
FAM228B-205ENST00000611127 STAM2O75886 525 aa8.82□□□□□ -1
FAM228B-205ENST00000611127 UBOX5O94941 541 aa8.82□□□□□ -1
FAM228B-205ENST00000611127 REC8O95072 547 aa8.82□□□□□ -1
FAM228B-205ENST00000611127 PLEKHA8P1O95397 391 aa8.82□□□□□ -1
FAM228B-205ENST00000611127 RXRAP19793 462 aa8.82□□□□□ -1
FAM228B-205ENST00000611127 EPHB4P54760 987 aa8.82□□□□□ -1
FAM228B-205ENST00000611127 SMAD3P84022 425 aaKnown RBP8.82□□□□□ -1
FAM228B-205ENST00000611127 ARHGAP1Q07960 439 aa8.82□□□□□ -1
FAM228B-205ENST00000611127 DGKDQ16760 1214 aa8.82□□□□□ -1
FAM228B-205ENST00000611127 NFRKBQ6P4R8 1299 aa8.82□□□□□ -1
FAM228B-205ENST00000611127 DHX37Q8IY37 1157 aaKnown RBP8.82□□□□□ -1
FAM228B-205ENST00000611127 ZNF655Q8N720 491 aaPredicted RBP8.82□□□□□ -1
FAM228B-205ENST00000611127 SMARCC2Q8TAQ2 1214 aa8.82□□□□□ -1
FAM228B-205ENST00000611127 AFG1LQ8WV93 481 aa8.82□□□□□ -1
FAM228B-205ENST00000611127 SREK1Q8WXA9 508 aaKnown RBP8.82□□□□□ -1
FAM228B-205ENST00000611127 RNPC3Q96LT9 517 aaKnown RBP8.82□□□□□ -1
FAM228B-205ENST00000611127 LRRC2Q9BYS8 371 aa8.82□□□□□ -1
FAM228B-205ENST00000611127 TRPV6Q9H1D0 765 aa8.82□□□□□ -1
FAM228B-205ENST00000611127 RBM28Q9NW13 759 aaKnown RBP8.82□□□□□ -1
FAM228B-205ENST00000611127 ADAMTS1Q9UHI8 967 aa8.82□□□□□ -1
FAM228B-205ENST00000611127 FRMPD3Q5JV73 1810 aa8.82□□□□□ -1
FAM228B-205ENST00000611127 PLXNA1Q9UIW2 1896 aa8.81□□□□□ -1
FAM228B-205ENST00000611127 PPFIA4O75335 1185 aa8.81□□□□□ -1
FAM228B-205ENST00000611127 MMP3P08254 477 aa8.81□□□□□ -1
FAM228B-205ENST00000611127 CSF2RAP15509 400 aa8.81□□□□□ -1
FAM228B-205ENST00000611127 CYP2C18P33260 490 aa8.81□□□□□ -1
FAM228B-205ENST00000611127 HSPA4P34932 840 aa8.81□□□□□ -1
FAM228B-205ENST00000611127 ERVFC1P60507 584 aa8.81□□□□□ -1
FAM228B-205ENST00000611127 TEKQ02763 1124 aa8.81□□□□□ -1
FAM228B-205ENST00000611127 ADCK5Q3MIX3 580 aa8.81□□□□□ -1
FAM228B-205ENST00000611127 GNPTABQ3T906 1256 aa8.81□□□□□ -1
FAM228B-205ENST00000611127 FAM47CQ5HY64 1035 aa8.81□□□□□ -1
FAM228B-205ENST00000611127 ERICH6BQ5W0A0 696 aa8.81□□□□□ -1
FAM228B-205ENST00000611127 OVOS1Q6IE37 1185 aa8.81□□□□□ -1
FAM228B-205ENST00000611127 XRRA1Q6P2D8 792 aa8.81□□□□□ -1
FAM228B-205ENST00000611127 PSRC1Q6PGN9 363 aaPredicted RBP8.81□□□□□ -1
FAM228B-205ENST00000611127 APOA5Q6Q788 366 aa8.81□□□□□ -1
FAM228B-205ENST00000611127 TMTC3Q6ZXV5 915 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms