RNA–Protein interactions for RNA: ENST00000607559.1

TPM2-208, Transcript of tropomyosin 2, human

TSL 2

Gene TPM2, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPM2-208	ENST00000607559	CALML4	Q96GE6	196 aa		11.76	□□□□□ -0.53
TPM2-208	ENST00000607559	RPGRIP1	Q96KN7	1286 aa		11.76	□□□□□ -0.53
TPM2-208	ENST00000607559	PRRX2	Q99811	253 aa		11.76	□□□□□ -0.53
TPM2-208	ENST00000607559	TARS2	Q9BW92	718 aa	Known RBP	11.76	□□□□□ -0.53
TPM2-208	ENST00000607559	CDT1	Q9H211	546 aa		11.76	□□□□□ -0.53
TPM2-208	ENST00000607559	SRPRB	Q9Y5M8	271 aa	Known RBP	11.76	□□□□□ -0.53
TPM2-208	ENST00000607559	SF3B1	O75533	1304 aa	Known RBP eCLIP	11.76	□□□□□ -0.53
TPM2-208	ENST00000607559	MYO10	Q9HD67	2058 aa		11.75	□□□□□ -0.53
TPM2-208	ENST00000607559	TMEM221	A6NGB7	291 aa		11.75	□□□□□ -0.53
TPM2-208	ENST00000607559		M0R296	226 aa		11.75	□□□□□ -0.53
TPM2-208	ENST00000607559	FGFR3	P22607	806 aa		11.75	□□□□□ -0.53
TPM2-208	ENST00000607559	ABCD1	P33897	745 aa		11.75	□□□□□ -0.53
TPM2-208	ENST00000607559	MCL1	Q07820	350 aa		11.75	□□□□□ -0.53
TPM2-208	ENST00000607559	REST	Q13127	1097 aa		11.75	□□□□□ -0.53
TPM2-208	ENST00000607559	UPP1	Q16831	310 aa		11.75	□□□□□ -0.53
TPM2-208	ENST00000607559	ELMSAN1	Q6PJG2	1045 aa		11.75	□□□□□ -0.53
TPM2-208	ENST00000607559	C12orf76	Q8N812	135 aa	Predicted RBP	11.75	□□□□□ -0.53
TPM2-208	ENST00000607559	LNX1	Q8TBB1	728 aa	Predicted RBP	11.75	□□□□□ -0.53
TPM2-208	ENST00000607559	CDK5RAP3	Q96JB5	506 aa		11.75	□□□□□ -0.53
TPM2-208	ENST00000607559	TSPAN18	Q96SJ8	248 aa		11.75	□□□□□ -0.53
TPM2-208	ENST00000607559	FIZ1	Q96SL8	496 aa		11.75	□□□□□ -0.53
TPM2-208	ENST00000607559	TTPAL	Q9BTX7	342 aa		11.75	□□□□□ -0.53
TPM2-208	ENST00000607559	ST6GALNAC4	Q9H4F1	302 aa		11.75	□□□□□ -0.53
TPM2-208	ENST00000607559	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	11.75	□□□□□ -0.53
TPM2-208	ENST00000607559	PLEKHA5	Q9HAU0	1116 aa		11.75	□□□□□ -0.53
TPM2-208	ENST00000607559	TOPORS	Q9NS56	1045 aa	Predicted RBP	11.75	□□□□□ -0.53
TPM2-208	ENST00000607559	SLC38A7	Q9NVC3	462 aa		11.75	□□□□□ -0.53
TPM2-208	ENST00000607559	ZDHHC7	Q9NXF8	308 aa		11.75	□□□□□ -0.53
TPM2-208	ENST00000607559	CNTN3	Q9P232	1028 aa		11.75	□□□□□ -0.53
TPM2-208	ENST00000607559	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	11.75	□□□□□ -0.53
TPM2-208	ENST00000607559		K7ELQ4	463 aa	Predicted RBP	11.74	□□□□□ -0.53
TPM2-208	ENST00000607559	SLC16A4	O15374	487 aa		11.74	□□□□□ -0.53
TPM2-208	ENST00000607559	MEFV	O15553	781 aa	Predicted RBP	11.74	□□□□□ -0.53
TPM2-208	ENST00000607559	KIF4A	O95239	1232 aa		11.74	□□□□□ -0.53
TPM2-208	ENST00000607559	GLUD1	P00367	558 aa		11.74	□□□□□ -0.53
TPM2-208	ENST00000607559	POU2F2	P09086	479 aa		11.74	□□□□□ -0.53
TPM2-208	ENST00000607559	RPL9	P32969	192 aa	Known RBP	11.74	□□□□□ -0.53
TPM2-208	ENST00000607559	POU5F1	Q01860	360 aa	Known RBP	11.74	□□□□□ -0.53
TPM2-208	ENST00000607559	GRIN1	Q05586	938 aa		11.74	□□□□□ -0.53
TPM2-208	ENST00000607559	SIGLEC14	Q08ET2	396 aa		11.74	□□□□□ -0.53
TPM2-208	ENST00000607559	SLC39A14	Q15043	492 aa		11.74	□□□□□ -0.53
TPM2-208	ENST00000607559	ZBTB6	Q15916	424 aa		11.74	□□□□□ -0.53
TPM2-208	ENST00000607559	PTPN21	Q16825	1174 aa		11.74	□□□□□ -0.53
TPM2-208	ENST00000607559	RTP2	Q5QGT7	225 aa		11.74	□□□□□ -0.53
TPM2-208	ENST00000607559	RARS2	Q5T160	578 aa	Known RBP	11.74	□□□□□ -0.53
TPM2-208	ENST00000607559	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	11.74	□□□□□ -0.53
TPM2-208	ENST00000607559	SUGP1	Q8IWZ8	645 aa	Known RBP	11.74	□□□□□ -0.53
TPM2-208	ENST00000607559	RAD54L	Q92698	747 aa		11.74	□□□□□ -0.53
TPM2-208	ENST00000607559	PBXIP1	Q96AQ6	731 aa		11.74	□□□□□ -0.53
TPM2-208	ENST00000607559	ZNF707	Q96C28	371 aa	Predicted RBP	11.74	□□□□□ -0.53
TPM2-208	ENST00000607559	ASIC4	Q96FT7	647 aa		11.74	□□□□□ -0.53
TPM2-208	ENST00000607559	SNX27	Q96L92	541 aa		11.74	□□□□□ -0.53
TPM2-208	ENST00000607559	ACAP3	Q96P50	834 aa		11.74	□□□□□ -0.53
TPM2-208	ENST00000607559	CLSTN3	Q9BQT9	956 aa		11.74	□□□□□ -0.53
TPM2-208	ENST00000607559	CCDC94	Q9BW85	323 aa	Predicted RBP	11.74	□□□□□ -0.53
TPM2-208	ENST00000607559	WDR6	Q9NNW5	1121 aa	Known RBP	11.74	□□□□□ -0.53
TPM2-208	ENST00000607559	FBXO2	Q9UK22	296 aa	Predicted RBP	11.74	□□□□□ -0.53
TPM2-208	ENST00000607559	MTMR6	Q9Y217	621 aa		11.74	□□□□□ -0.53
TPM2-208	ENST00000607559	GDA	Q9Y2T3	454 aa		11.74	□□□□□ -0.53
TPM2-208	ENST00000607559	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	11.74	□□□□□ -0.53
TPM2-208	ENST00000607559	C2CD4D	B7Z1M9	353 aa		11.73	□□□□□ -0.53
TPM2-208	ENST00000607559	CLDN3	O15551	220 aa		11.73	□□□□□ -0.53
TPM2-208	ENST00000607559	TGM5	O43548	720 aa		11.73	□□□□□ -0.53
TPM2-208	ENST00000607559	TRAPPC3	O43617	180 aa		11.73	□□□□□ -0.53
TPM2-208	ENST00000607559	FAM189A1	O60320	539 aa		11.73	□□□□□ -0.53
TPM2-208	ENST00000607559	TBC1D4	O60343	1298 aa		11.73	□□□□□ -0.53
TPM2-208	ENST00000607559	SSB	P05455	408 aa	Known RBP eCLIP	11.73	□□□□□ -0.53
TPM2-208	ENST00000607559	PLCG1	P19174	1290 aa		11.73	□□□□□ -0.53
TPM2-208	ENST00000607559	HOXA9	P31269	272 aa		11.73	□□□□□ -0.53
TPM2-208	ENST00000607559	YARS	P54577	528 aa	Known RBP	11.73	□□□□□ -0.53
TPM2-208	ENST00000607559	GTF2B	Q00403	316 aa		11.73	□□□□□ -0.53
TPM2-208	ENST00000607559	NHLH1	Q02575	133 aa		11.73	□□□□□ -0.53
TPM2-208	ENST00000607559	STRN3	Q13033	797 aa		11.73	□□□□□ -0.53
TPM2-208	ENST00000607559	RAB33A	Q14088	237 aa		11.73	□□□□□ -0.53
TPM2-208	ENST00000607559	KYAT1	Q16773	422 aa		11.73	□□□□□ -0.53
TPM2-208	ENST00000607559	TMEM132A	Q24JP5	1023 aa		11.73	□□□□□ -0.53
TPM2-208	ENST00000607559	UVSSA	Q2YD98	709 aa		11.73	□□□□□ -0.53
TPM2-208	ENST00000607559	SLC10A6	Q3KNW5	377 aa		11.73	□□□□□ -0.53
TPM2-208	ENST00000607559	ZNF568	Q3ZCX4	644 aa		11.73	□□□□□ -0.53
TPM2-208	ENST00000607559	KANK3	Q6NY19	840 aa		11.73	□□□□□ -0.53
TPM2-208	ENST00000607559	TMC5	Q6UXY8	1006 aa		11.73	□□□□□ -0.53
TPM2-208	ENST00000607559	OTOP3	Q7RTS5	596 aa		11.73	□□□□□ -0.53
TPM2-208	ENST00000607559	HAUS6	Q7Z4H7	955 aa		11.73	□□□□□ -0.53
TPM2-208	ENST00000607559	UBALD2	Q8IYN6	164 aa		11.73	□□□□□ -0.53
TPM2-208	ENST00000607559	CEP120	Q8N960	986 aa		11.73	□□□□□ -0.53
TPM2-208	ENST00000607559	ZNF454	Q8N9F8	522 aa		11.73	□□□□□ -0.53
TPM2-208	ENST00000607559	RIN2	Q8WYP3	895 aa	Predicted RBP	11.73	□□□□□ -0.53
TPM2-208	ENST00000607559	LARP4B	Q92615	738 aa	Known RBP	11.73	□□□□□ -0.53
TPM2-208	ENST00000607559	ZBTB45	Q96K62	511 aa	Predicted RBP	11.73	□□□□□ -0.53
TPM2-208	ENST00000607559	ZMAT2	Q96NC0	199 aa	Known RBP	11.73	□□□□□ -0.53
TPM2-208	ENST00000607559	REEP2	Q9BRK0	252 aa		11.73	□□□□□ -0.53
TPM2-208	ENST00000607559	STRA6	Q9BX79	667 aa		11.73	□□□□□ -0.53
TPM2-208	ENST00000607559	PARVG	Q9HBI0	331 aa		11.73	□□□□□ -0.53
TPM2-208	ENST00000607559	STK17A	Q9UEE5	414 aa		11.73	□□□□□ -0.53
TPM2-208	ENST00000607559	CDH22	Q9UJ99	828 aa		11.73	□□□□□ -0.53
TPM2-208	ENST00000607559	SORCS3	Q9UPU3	1222 aa		11.73	□□□□□ -0.53
TPM2-208	ENST00000607559	BACE2	Q9Y5Z0	518 aa		11.73	□□□□□ -0.53
TPM2-208	ENST00000607559	CLIC4	Q9Y696	253 aa		11.73	□□□□□ -0.53
TPM2-208	ENST00000607559	STYXL1	Q9Y6J8	313 aa		11.73	□□□□□ -0.53
TPM2-208	ENST00000607559	CCDC195	A0A1B0GUA6	201 aa		11.72	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms