RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 PTCH1Q13635 1447 aa9.15□□□□□ -0.94
CSMD1-216ENST00000602557 SSTR3P32745 418 aaPredicted RBP9.15□□□□□ -0.94
CSMD1-216ENST00000602557 SUGP1Q8IWZ8 645 aaKnown RBP9.15□□□□□ -0.94
CSMD1-216ENST00000602557 OR6B3Q8NGW1 331 aa9.15□□□□□ -0.94
CSMD1-216ENST00000602557 MKNK1Q9BUB5 465 aa9.15□□□□□ -0.94
CSMD1-216ENST00000602557 DHX36Q9H2U1 1008 aaKnown RBP9.15□□□□□ -0.94
CSMD1-216ENST00000602557 ZNF667Q5HYK9 610 aa9.15□□□□□ -0.94
CSMD1-216ENST00000602557 KRT39Q6A163 491 aa9.15□□□□□ -0.94
CSMD1-216ENST00000602557 IZUMO2Q6UXV1 221 aa9.15□□□□□ -0.94
CSMD1-216ENST00000602557 NLRP10Q86W26 655 aa9.15□□□□□ -0.94
CSMD1-216ENST00000602557 LZICQ8WZA0 190 aa9.15□□□□□ -0.94
CSMD1-216ENST00000602557 FUT8Q9BYC5 575 aa9.15□□□□□ -0.94
CSMD1-216ENST00000602557 MMADHCQ9H3L0 296 aaPredicted RBP9.15□□□□□ -0.94
CSMD1-216ENST00000602557 SAMD9LQ8IVG5 1584 aa9.15□□□□□ -0.94
CSMD1-216ENST00000602557 POTEFA5A3E0 1075 aa9.15□□□□□ -0.94
CSMD1-216ENST00000602557 AGRPO00253 132 aa9.15□□□□□ -0.94
CSMD1-216ENST00000602557 POTEIP0CG38 1075 aa9.15□□□□□ -0.94
CSMD1-216ENST00000602557 POTEGQ6S5H5 508 aa9.15□□□□□ -0.94
CSMD1-216ENST00000602557 POTEEQ6S8J3 1075 aa9.15□□□□□ -0.94
CSMD1-216ENST00000602557 TRIM74Q86UV6 250 aa9.15□□□□□ -0.94
CSMD1-216ENST00000602557 TRIM73Q86UV7 250 aa9.15□□□□□ -0.94
CSMD1-216ENST00000602557 TRIM49P0CI25 452 aa9.15□□□□□ -0.94
CSMD1-216ENST00000602557 TRIM49CP0CI26 452 aa9.15□□□□□ -0.94
CSMD1-216ENST00000602557 MXD4Q14582 209 aaPredicted RBP9.15□□□□□ -0.94
CSMD1-216ENST00000602557 SYCP2LQ5T4T6 812 aa9.15□□□□□ -0.94
CSMD1-216ENST00000602557 AGBL2Q5U5Z8 902 aa9.15□□□□□ -0.94
CSMD1-216ENST00000602557 SLFN12LQ6IEE8 588 aa9.15□□□□□ -0.94
CSMD1-216ENST00000602557 PLEKHM3Q6ZWE6 761 aa9.15□□□□□ -0.94
CSMD1-216ENST00000602557 GLMNQ92990 594 aa9.15□□□□□ -0.94
CSMD1-216ENST00000602557 ACAP3Q96P50 834 aa9.15□□□□□ -0.94
CSMD1-216ENST00000602557 SARS2Q9NP81 518 aaKnown RBP9.15□□□□□ -0.94
CSMD1-216ENST00000602557 MYH15Q9Y2K3 1946 aa9.15□□□□□ -0.94
CSMD1-216ENST00000602557 NLRP1Q9C000 1473 aa9.15□□□□□ -0.94
CSMD1-216ENST00000602557 TOB2Q14106 344 aaPredicted RBP9.15□□□□□ -0.94
CSMD1-216ENST00000602557 FLAD1Q8NFF5 587 aa9.15□□□□□ -0.94
CSMD1-216ENST00000602557 ZNF564Q8TBZ8 553 aaPredicted RBP9.15□□□□□ -0.94
CSMD1-216ENST00000602557 CNDP1Q96KN2 507 aa9.15□□□□□ -0.94
CSMD1-216ENST00000602557 EXOSC4Q9NPD3 245 aaKnown RBP9.15□□□□□ -0.94
CSMD1-216ENST00000602557 PODXLO00592 558 aa9.15□□□□□ -0.94
CSMD1-216ENST00000602557 AGTP01019 485 aa9.15□□□□□ -0.94
CSMD1-216ENST00000602557 SERPINB2P05120 415 aa9.15□□□□□ -0.94
CSMD1-216ENST00000602557 SURF1Q15526 300 aa9.15□□□□□ -0.94
CSMD1-216ENST00000602557 RBBP7Q16576 425 aa9.15□□□□□ -0.94
CSMD1-216ENST00000602557 LPCAT2Q7L5N7 544 aa9.15□□□□□ -0.94
CSMD1-216ENST00000602557 GCNAQ96QF7 691 aa9.15□□□□□ -0.94
CSMD1-216ENST00000602557 MYO1GB0I1T2 1018 aa9.15□□□□□ -0.95
CSMD1-216ENST00000602557 POTECB2RU33 542 aa9.15□□□□□ -0.95
CSMD1-216ENST00000602557 IL6STP40189 918 aaPredicted RBP9.15□□□□□ -0.95
CSMD1-216ENST00000602557 ACAP1Q15027 740 aa9.15□□□□□ -0.95
CSMD1-216ENST00000602557 AKIRIN2Q53H80 203 aa9.15□□□□□ -0.95
CSMD1-216ENST00000602557 TBC1D10CQ8IV04 446 aa9.15□□□□□ -0.95
CSMD1-216ENST00000602557 CALML6Q8TD86 181 aa9.15□□□□□ -0.95
CSMD1-216ENST00000602557 UBOX5O94941 541 aa9.15□□□□□ -0.95
CSMD1-216ENST00000602557 CLPTM1O96005 669 aa9.15□□□□□ -0.95
CSMD1-216ENST00000602557 SERPINB8P50452 374 aa9.15□□□□□ -0.95
CSMD1-216ENST00000602557 THEMIS2Q5TEJ8 643 aa9.15□□□□□ -0.95
CSMD1-216ENST00000602557 PROM2Q8N271 834 aa9.15□□□□□ -0.95
CSMD1-216ENST00000602557 OXER1Q8TDS5 423 aa9.15□□□□□ -0.95
CSMD1-216ENST00000602557 C17orf50Q8WW18 174 aa9.15□□□□□ -0.95
CSMD1-216ENST00000602557 RUBCNQ92622 972 aa9.15□□□□□ -0.95
CSMD1-216ENST00000602557 AP4S1Q9Y587 144 aa9.15□□□□□ -0.95
CSMD1-216ENST00000602557 SPATA31E1Q6ZUB1 1445 aa9.15□□□□□ -0.95
CSMD1-216ENST00000602557 ATP6V1E1P36543 226 aa9.15□□□□□ -0.95
CSMD1-216ENST00000602557 AKR1D1P51857 326 aa9.15□□□□□ -0.95
CSMD1-216ENST00000602557 CACNB3P54284 484 aa9.15□□□□□ -0.95
CSMD1-216ENST00000602557 UNC45AQ9H3U1 944 aa9.15□□□□□ -0.95
CSMD1-216ENST00000602557 RAD21L1Q9H4I0 556 aa9.15□□□□□ -0.95
CSMD1-216ENST00000602557 RBMX2Q9Y388 322 aaKnown RBP9.15□□□□□ -0.95
CSMD1-216ENST00000602557 SYNDIG1LA6NDD5 238 aa9.14□□□□□ -0.95
CSMD1-216ENST00000602557 JAK3P52333 1124 aa9.14□□□□□ -0.95
CSMD1-216ENST00000602557 THNSL1Q8IYQ7 743 aa9.14□□□□□ -0.95
CSMD1-216ENST00000602557 DPF2Q92785 391 aa9.14□□□□□ -0.95
CSMD1-216ENST00000602557 WWP1Q9H0M0 922 aa9.14□□□□□ -0.95
CSMD1-216ENST00000602557 POU5F1BQ06416 359 aa9.14□□□□□ -0.95
CSMD1-216ENST00000602557 DNAL1Q4LDG9 190 aa9.14□□□□□ -0.95
CSMD1-216ENST00000602557 CATSPER4Q7RTX7 472 aa9.14□□□□□ -0.95
CSMD1-216ENST00000602557 GH2P01242 217 aa9.14□□□□□ -0.95
CSMD1-216ENST00000602557 LTKP29376 864 aa9.14□□□□□ -0.95
CSMD1-216ENST00000602557 ANGPT1Q15389 498 aa9.14□□□□□ -0.95
CSMD1-216ENST00000602557 KYNUQ16719 465 aa9.14□□□□□ -0.95
CSMD1-216ENST00000602557 KLHL38Q2WGJ6 581 aa9.14□□□□□ -0.95
CSMD1-216ENST00000602557 RNF135Q8IUD6 432 aa9.14□□□□□ -0.95
CSMD1-216ENST00000602557 SIRT2Q8IXJ6 389 aa9.14□□□□□ -0.95
CSMD1-216ENST00000602557 KDM4CQ9H3R0 1056 aa9.14□□□□□ -0.95
CSMD1-216ENST00000602557 HPS4Q9NQG7 708 aa9.14□□□□□ -0.95
CSMD1-216ENST00000602557 PPIDQ08752 370 aaKnown RBP9.14□□□□□ -0.95
CSMD1-216ENST00000602557 TJAP1Q5JTD0 557 aa9.14□□□□□ -0.95
CSMD1-216ENST00000602557 PADI6Q6TGC4 694 aa9.14□□□□□ -0.95
CSMD1-216ENST00000602557 C11orf70Q9BRQ4 267 aa9.14□□□□□ -0.95
CSMD1-216ENST00000602557 SYBUQ9NX95 663 aa9.14□□□□□ -0.95
CSMD1-216ENST00000602557 PCSK1NQ9UHG2 260 aa9.14□□□□□ -0.95
CSMD1-216ENST00000602557 APPL1Q9UKG1 709 aa9.14□□□□□ -0.95
CSMD1-216ENST00000602557 SNX12Q9UMY4 172 aa9.14□□□□□ -0.95
CSMD1-216ENST00000602557 USP17L15C9J2P7 530 aa9.14□□□□□ -0.95
CSMD1-216ENST00000602557 USP17L13C9JLJ4 530 aa9.14□□□□□ -0.95
CSMD1-216ENST00000602557 USP17L11C9JVI0 530 aa9.14□□□□□ -0.95
CSMD1-216ENST00000602557 USP17L18D6R9N7 530 aa9.14□□□□□ -0.95
CSMD1-216ENST00000602557 USP17L22D6RA61 530 aa9.14□□□□□ -0.95
CSMD1-216ENST00000602557 USP17L17D6RBQ6 530 aa9.14□□□□□ -0.95
CSMD1-216ENST00000602557 USP17L19D6RCP7 530 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms