RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 KCNJ6P48051 423 aa18.83■□□□□ 0.6
CXXC1-212ENST00000589940 JAM2P57087 298 aa18.83■□□□□ 0.6
CXXC1-212ENST00000589940 TFAMQ00059 246 aaKnown RBP18.83■□□□□ 0.6
CXXC1-212ENST00000589940 PAK2Q13177 524 aa18.83■□□□□ 0.6
CXXC1-212ENST00000589940 RAPGEF1Q13905 1077 aa18.83■□□□□ 0.6
CXXC1-212ENST00000589940 E4F1Q66K89 784 aaPredicted RBP18.83■□□□□ 0.6
CXXC1-212ENST00000589940 CD302Q8IX05 232 aa18.83■□□□□ 0.6
CXXC1-212ENST00000589940 STK33Q9BYT3 514 aa18.83■□□□□ 0.6
CXXC1-212ENST00000589940 NXF3Q9H4D5 531 aaKnown RBP18.83■□□□□ 0.6
CXXC1-212ENST00000589940 DNAJC12Q9UKB3 198 aa18.83■□□□□ 0.6
CXXC1-212ENST00000589940 PADI3Q9ULW8 664 aa18.83■□□□□ 0.6
CXXC1-212ENST00000589940 VNN1O95497 513 aa18.82■□□□□ 0.6
CXXC1-212ENST00000589940 CD4P01730 458 aa18.82■□□□□ 0.6
CXXC1-212ENST00000589940 TMEM191BP0C7N4 346 aa18.82■□□□□ 0.6
CXXC1-212ENST00000589940 CD52P31358 61 aa18.82■□□□□ 0.6
CXXC1-212ENST00000589940 YARSP54577 528 aaKnown RBP18.82■□□□□ 0.6
CXXC1-212ENST00000589940 CDK17Q00537 523 aa18.82■□□□□ 0.6
CXXC1-212ENST00000589940 SFMBT2Q5VUG0 894 aa18.82■□□□□ 0.6
CXXC1-212ENST00000589940 TRAF7Q6Q0C0 670 aa18.82■□□□□ 0.6
CXXC1-212ENST00000589940 TRAPPC11Q7Z392 1133 aa18.82■□□□□ 0.6
CXXC1-212ENST00000589940 ANKRD36BP1Q96IX9 119 aa18.82■□□□□ 0.6
CXXC1-212ENST00000589940 OSBPL7Q9BZF2 842 aa18.82■□□□□ 0.6
CXXC1-212ENST00000589940 PLEKHA5Q9HAU0 1116 aa18.82■□□□□ 0.6
CXXC1-212ENST00000589940 HES2Q9Y543 173 aa18.82■□□□□ 0.6
CXXC1-212ENST00000589940 SOWAHDA6NJG2 315 aa18.82■□□□□ 0.6
CXXC1-212ENST00000589940 PHACTR2O75167 634 aa18.82■□□□□ 0.6
CXXC1-212ENST00000589940 TNNC2P02585 160 aa18.82■□□□□ 0.6
CXXC1-212ENST00000589940 NFICP08651 508 aa18.82■□□□□ 0.6
CXXC1-212ENST00000589940 GJA8P48165 433 aa18.82■□□□□ 0.6
CXXC1-212ENST00000589940 JADE1Q6IE81 842 aa18.82■□□□□ 0.6
CXXC1-212ENST00000589940 ARHGEF19Q8IW93 802 aa18.82■□□□□ 0.6
CXXC1-212ENST00000589940 NT5C1BQ96P26 610 aa18.82■□□□□ 0.6
CXXC1-212ENST00000589940 UBE2TQ9NPD8 197 aaPredicted RBP18.82■□□□□ 0.6
CXXC1-212ENST00000589940 ANK1P16157 1881 aa18.82■□□□□ 0.6
CXXC1-212ENST00000589940 RBAK-RBAKDNI3L0D1 243 aa18.81■□□□□ 0.6
CXXC1-212ENST00000589940 NCOA4Q13772 614 aa18.81■□□□□ 0.6
CXXC1-212ENST00000589940 NT5DC4Q86YG4 428 aa18.81■□□□□ 0.6
CXXC1-212ENST00000589940 SNX27Q96L92 541 aa18.81■□□□□ 0.6
CXXC1-212ENST00000589940 CHP1Q99653 195 aa18.81■□□□□ 0.6
CXXC1-212ENST00000589940 AIPL1Q9NZN9 384 aa18.81■□□□□ 0.6
CXXC1-212ENST00000589940 C2CD2Q9Y426 696 aa18.81■□□□□ 0.6
CXXC1-212ENST00000589940 IPPQ9Y573 584 aa18.81■□□□□ 0.6
CXXC1-212ENST00000589940 RECQL4O94761 1208 aa18.81■□□□□ 0.6
CXXC1-212ENST00000589940 ZSCAN20P17040 1043 aaPredicted RBP18.81■□□□□ 0.6
CXXC1-212ENST00000589940 BFSP2Q13515 415 aa18.81■□□□□ 0.6
CXXC1-212ENST00000589940 WDR44Q5JSH3 913 aa18.81■□□□□ 0.6
CXXC1-212ENST00000589940 SLC39A5Q6ZMH5 540 aa18.81■□□□□ 0.6
CXXC1-212ENST00000589940 ANKLE1Q8NAG6 615 aa18.81■□□□□ 0.6
CXXC1-212ENST00000589940 SMG8Q8ND04 991 aaKnown RBP18.81■□□□□ 0.6
CXXC1-212ENST00000589940 PI4K2AQ9BTU6 479 aa18.81■□□□□ 0.6
CXXC1-212ENST00000589940 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.81■□□□□ 0.63e-8■■■■■ 92.7
CXXC1-212ENST00000589940 F8VZ95 297 aa18.8■□□□□ 0.6
CXXC1-212ENST00000589940 PQBP1O60828 265 aaKnown RBP18.8■□□□□ 0.6
CXXC1-212ENST00000589940 COL6A1P12109 1028 aa18.8■□□□□ 0.6
CXXC1-212ENST00000589940 ATN1P54259 1190 aaPredicted RBP18.8■□□□□ 0.6
CXXC1-212ENST00000589940 DRAP1Q14919 205 aaPredicted RBP18.8■□□□□ 0.6
CXXC1-212ENST00000589940 TMEM132DQ14C87 1099 aa18.8■□□□□ 0.6
CXXC1-212ENST00000589940 ANKRD33Q7Z3H0 272 aa18.8■□□□□ 0.6
CXXC1-212ENST00000589940 PPM1KQ8N3J5 372 aa18.8■□□□□ 0.6
CXXC1-212ENST00000589940 C1orf112Q9NSG2 853 aa18.8■□□□□ 0.6
CXXC1-212ENST00000589940 TLR3O15455 904 aaKnown RBP18.8■□□□□ 0.6
CXXC1-212ENST00000589940 SELPP16109 830 aa18.8■□□□□ 0.6
CXXC1-212ENST00000589940 MBTPS1Q14703 1052 aa18.8■□□□□ 0.6
CXXC1-212ENST00000589940 ALKAL1Q6UXT8 129 aa18.8■□□□□ 0.6
CXXC1-212ENST00000589940 RAD9BQ6WBX8 426 aa18.8■□□□□ 0.6
CXXC1-212ENST00000589940 FMNL3Q8IVF7 1028 aa18.8■□□□□ 0.6
CXXC1-212ENST00000589940 HELQQ8TDG4 1101 aa18.8■□□□□ 0.6
CXXC1-212ENST00000589940 APOL6Q9BWW8 343 aa18.8■□□□□ 0.6
CXXC1-212ENST00000589940 GPR88Q9GZN0 384 aa18.8■□□□□ 0.6
CXXC1-212ENST00000589940 DERAQ9Y315 318 aa18.8■□□□□ 0.6
CXXC1-212ENST00000589940 PCDHB2Q9Y5E7 798 aa18.8■□□□□ 0.6
CXXC1-212ENST00000589940 AKAP5P24588 427 aa18.79■□□□□ 0.6
CXXC1-212ENST00000589940 STAT1P42224 750 aa18.79■□□□□ 0.6
CXXC1-212ENST00000589940 MFAP3P55082 362 aa18.79■□□□□ 0.6
CXXC1-212ENST00000589940 GCNT1Q02742 428 aa18.79■□□□□ 0.6
CXXC1-212ENST00000589940 MTF1Q14872 753 aa18.79■□□□□ 0.6
CXXC1-212ENST00000589940 ASIC2Q16515 512 aa18.79■□□□□ 0.6
CXXC1-212ENST00000589940 C1orf53Q5VUE5 145 aa18.79■□□□□ 0.6
CXXC1-212ENST00000589940 LRRC8DQ7L1W4 858 aa18.79■□□□□ 0.6
CXXC1-212ENST00000589940 FAM81BQ96LP2 452 aa18.79■□□□□ 0.6
CXXC1-212ENST00000589940 TRAIPQ9BWF2 469 aa18.79■□□□□ 0.6
CXXC1-212ENST00000589940 IMPG2Q9BZV3 1241 aa18.79■□□□□ 0.6
CXXC1-212ENST00000589940 FAM105AQ9NUU6 356 aa18.79■□□□□ 0.6
CXXC1-212ENST00000589940 CNTN3Q9P232 1028 aa18.79■□□□□ 0.6
CXXC1-212ENST00000589940 CITO14578 2027 aa18.79■□□□□ 0.6
CXXC1-212ENST00000589940 PITPNM1O00562 1244 aa18.78■□□□□ 0.6
CXXC1-212ENST00000589940 CST3P01034 146 aaPredicted RBP18.78■□□□□ 0.6
CXXC1-212ENST00000589940 SERPING1P05155 500 aa18.78■□□□□ 0.6
CXXC1-212ENST00000589940 TRPC3Q13507 836 aa18.78■□□□□ 0.6
CXXC1-212ENST00000589940 DSC3Q14574 896 aa18.78■□□□□ 0.6
CXXC1-212ENST00000589940 ARHGAP44Q17R89 818 aa18.78■□□□□ 0.6
CXXC1-212ENST00000589940 HGSNATQ68CP4 663 aa18.78■□□□□ 0.6
CXXC1-212ENST00000589940 ENOSF1Q7L5Y1 443 aa18.78■□□□□ 0.6
CXXC1-212ENST00000589940 C1orf127Q8N9H9 656 aa18.78■□□□□ 0.6
CXXC1-212ENST00000589940 DIS3LQ8TF46 1054 aaKnown RBP18.78■□□□□ 0.6
CXXC1-212ENST00000589940 TATDN2Q93075 761 aa18.78■□□□□ 0.6
CXXC1-212ENST00000589940 KIF12Q96FN5 646 aa18.78■□□□□ 0.6
CXXC1-212ENST00000589940 RNF39Q9H2S5 420 aa18.78■□□□□ 0.6
CXXC1-212ENST00000589940 NHEJ1Q9H9Q4 299 aaPredicted RBP18.78■□□□□ 0.6
CXXC1-212ENST00000589940 ARHGAP20Q9P2F6 1191 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms