RNA–Protein interactions for RNA: ENST00000589937.5

RFX1-207, Transcript of regulatory factor X1, humanhuman

TSL 4

Gene RFX1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-207ENST00000589937 MIA3Q5JRA6 1907 aa13.89□□□□□ -0.19
RFX1-207ENST00000589937 CCL16O15467 120 aa13.88□□□□□ -0.19
RFX1-207ENST00000589937 ZMYND10O75800 440 aa13.88□□□□□ -0.19
RFX1-207ENST00000589937 PLS3P13797 630 aa13.88□□□□□ -0.19
RFX1-207ENST00000589937 FGFR3P22607 806 aa13.88□□□□□ -0.19
RFX1-207ENST00000589937 AVPR2P30518 371 aa13.88□□□□□ -0.19
RFX1-207ENST00000589937 MRE11P49959 708 aa13.88□□□□□ -0.19
RFX1-207ENST00000589937 SPAG1Q07617 926 aa13.88□□□□□ -0.19
RFX1-207ENST00000589937 MCM6Q14566 821 aa13.88□□□□□ -0.19
RFX1-207ENST00000589937 NOLC1Q14978 699 aaKnown RBP eCLIP13.88□□□□□ -0.19
RFX1-207ENST00000589937 KARSQ15046 597 aaKnown RBP13.88□□□□□ -0.19
RFX1-207ENST00000589937 XKR4Q5GH76 650 aa13.88□□□□□ -0.19
RFX1-207ENST00000589937 FAM173BQ6P4H8 233 aa13.88□□□□□ -0.19
RFX1-207ENST00000589937 ALKAL1Q6UXT8 129 aa13.88□□□□□ -0.19
RFX1-207ENST00000589937 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.88□□□□□ -0.19
RFX1-207ENST00000589937 USP49Q70CQ1 688 aa13.88□□□□□ -0.19
RFX1-207ENST00000589937 GRASPQ7Z6J2 395 aaPredicted RBP13.88□□□□□ -0.19
RFX1-207ENST00000589937 GPBP1Q86WP2 473 aa13.88□□□□□ -0.19
RFX1-207ENST00000589937 ACSF2Q96CM8 615 aaPredicted RBP13.88□□□□□ -0.19
RFX1-207ENST00000589937 CDK5RAP3Q96JB5 506 aa13.88□□□□□ -0.19
RFX1-207ENST00000589937 CCDC94Q9BW85 323 aaPredicted RBP13.88□□□□□ -0.19
RFX1-207ENST00000589937 PRKD2Q9BZL6 878 aa13.88□□□□□ -0.19
RFX1-207ENST00000589937 PIDD1Q9HB75 910 aa13.88□□□□□ -0.19
RFX1-207ENST00000589937 HCFC1R1Q9NWW0 138 aa13.88□□□□□ -0.19
RFX1-207ENST00000589937 TMEM189-UBE2V1I3L0A0 370 aa13.87□□□□□ -0.19
RFX1-207ENST00000589937 PODXLO00592 558 aa13.87□□□□□ -0.19
RFX1-207ENST00000589937 PAPLNO95428 1278 aa13.87□□□□□ -0.19
RFX1-207ENST00000589937 C8AP07357 584 aa13.87□□□□□ -0.19
RFX1-207ENST00000589937 CXCL8P10145 99 aa13.87□□□□□ -0.19
RFX1-207ENST00000589937 MCF2P10911 925 aa13.87□□□□□ -0.19
RFX1-207ENST00000589937 OR1D2P34982 312 aa13.87□□□□□ -0.19
RFX1-207ENST00000589937 TNFSF9P41273 254 aa13.87□□□□□ -0.19
RFX1-207ENST00000589937 GUCY2FP51841 1108 aa13.87□□□□□ -0.19
RFX1-207ENST00000589937 CREMQ03060 361 aa13.87□□□□□ -0.19
RFX1-207ENST00000589937 CUL4AQ13619 759 aa13.87□□□□□ -0.19
RFX1-207ENST00000589937 SF3A1Q15459 793 aaKnown RBP13.87□□□□□ -0.19
RFX1-207ENST00000589937 SPECC1Q5M775 1068 aa13.87□□□□□ -0.19
RFX1-207ENST00000589937 ARL6IP4Q66PJ3 421 aaKnown RBP13.87□□□□□ -0.19
RFX1-207ENST00000589937 PLCD3Q8N3E9 789 aa13.87□□□□□ -0.19
RFX1-207ENST00000589937 SLC7A14Q8TBB6 771 aa13.87□□□□□ -0.19
RFX1-207ENST00000589937 SPIRE2Q8WWL2 714 aa13.87□□□□□ -0.19
RFX1-207ENST00000589937 TCHPQ9BT92 498 aa13.87□□□□□ -0.19
RFX1-207ENST00000589937 IKZF4Q9H2S9 585 aa13.87□□□□□ -0.19
RFX1-207ENST00000589937 PLEKHA4Q9H4M7 779 aa13.87□□□□□ -0.19
RFX1-207ENST00000589937 FOXD4L1Q9NU39 408 aa13.87□□□□□ -0.19
RFX1-207ENST00000589937 ZDHHC7Q9NXF8 308 aa13.87□□□□□ -0.19
RFX1-207ENST00000589937 CNTN3Q9P232 1028 aa13.87□□□□□ -0.19
RFX1-207ENST00000589937 MTRRQ9UBK8 725 aa13.87□□□□□ -0.19
RFX1-207ENST00000589937 DUSP12Q9UNI6 340 aa13.87□□□□□ -0.19
RFX1-207ENST00000589937 CLIC4Q9Y696 253 aa13.87□□□□□ -0.19
RFX1-207ENST00000589937 CDY1Q9Y6F8 540 aa13.87□□□□□ -0.19
RFX1-207ENST00000589937 TISP43B9A030 160 aa13.86□□□□□ -0.19
RFX1-207ENST00000589937 CFHP08603 1231 aa13.86□□□□□ -0.19
RFX1-207ENST00000589937 MCM2P49736 904 aa13.86□□□□□ -0.19
RFX1-207ENST00000589937 YARSP54577 528 aaKnown RBP13.86□□□□□ -0.19
RFX1-207ENST00000589937 NCKAP1LP55160 1127 aa13.86□□□□□ -0.19
RFX1-207ENST00000589937 TDGQ13569 410 aa13.86□□□□□ -0.19
RFX1-207ENST00000589937 SLC10A6Q3KNW5 377 aa13.86□□□□□ -0.19
RFX1-207ENST00000589937 GPR65Q8IYL9 337 aa13.86□□□□□ -0.19
RFX1-207ENST00000589937 ACAP3Q96P50 834 aa13.86□□□□□ -0.19
RFX1-207ENST00000589937 KCNH6Q9H252 994 aa13.86□□□□□ -0.19
RFX1-207ENST00000589937 TOPORSQ9NS56 1045 aaPredicted RBP13.86□□□□□ -0.19
RFX1-207ENST00000589937 EPS15L1Q9UBC2 864 aa13.86□□□□□ -0.19
RFX1-207ENST00000589937 RBM19Q9Y4C8 960 aaKnown RBP13.86□□□□□ -0.19
RFX1-207ENST00000589937 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.86□□□□□ -0.19
RFX1-207ENST00000589937 PATJQ8NI35 1801 aa13.85□□□□□ -0.19
RFX1-207ENST00000589937 CFAP54Q96N23 3096 aa13.85□□□□□ -0.19
RFX1-207ENST00000589937 COL4A2P08572 1712 aa13.85□□□□□ -0.19
RFX1-207ENST00000589937 K7ENM7 598 aa13.85□□□□□ -0.19
RFX1-207ENST00000589937 NRG2O14511 850 aaPredicted RBP13.85□□□□□ -0.19
RFX1-207ENST00000589937 TOM1L1O75674 476 aa13.85□□□□□ -0.19
RFX1-207ENST00000589937 KCNE1P15382 129 aa13.85□□□□□ -0.19
RFX1-207ENST00000589937 NPR3P17342 541 aa13.85□□□□□ -0.19
RFX1-207ENST00000589937 MARCKSP29966 332 aaPredicted RBP13.85□□□□□ -0.19
RFX1-207ENST00000589937 MATR3P43243 847 aaKnown RBP eCLIP13.85□□□□□ -0.19
RFX1-207ENST00000589937 ELAVL2Q12926 359 aaKnown RBP13.85□□□□□ -0.19
RFX1-207ENST00000589937 STRN3Q13033 797 aa13.85□□□□□ -0.19
RFX1-207ENST00000589937 RESTQ13127 1097 aa13.85□□□□□ -0.19
RFX1-207ENST00000589937 HTR4Q13639 388 aa13.85□□□□□ -0.19
RFX1-207ENST00000589937 PPM1LQ5SGD2 360 aa13.85□□□□□ -0.19
RFX1-207ENST00000589937 VARS2Q5ST30 1063 aaKnown RBP13.85□□□□□ -0.19
RFX1-207ENST00000589937 LIN9Q5TKA1 542 aa13.85□□□□□ -0.19
RFX1-207ENST00000589937 SLC39A4Q6P5W5 647 aa13.85□□□□□ -0.19
RFX1-207ENST00000589937 ELMSAN1Q6PJG2 1045 aa13.85□□□□□ -0.19
RFX1-207ENST00000589937 DCLRE1AQ6PJP8 1040 aa13.85□□□□□ -0.19
RFX1-207ENST00000589937 BRAPQ7Z569 592 aa13.85□□□□□ -0.19
RFX1-207ENST00000589937 APBB1IPQ7Z5R6 666 aaPredicted RBP13.85□□□□□ -0.19
RFX1-207ENST00000589937 SIX5Q8N196 739 aa13.85□□□□□ -0.19
RFX1-207ENST00000589937 FLCNQ8NFG4 579 aa13.85□□□□□ -0.19
RFX1-207ENST00000589937 ITFG1Q8TB96 612 aa13.85□□□□□ -0.19
RFX1-207ENST00000589937 HDAC7Q8WUI4 952 aa13.85□□□□□ -0.19
RFX1-207ENST00000589937 ING5Q8WYH8 240 aa13.85□□□□□ -0.19
RFX1-207ENST00000589937 RAD54LQ92698 747 aa13.85□□□□□ -0.19
RFX1-207ENST00000589937 BICD1Q96G01 975 aa13.85□□□□□ -0.19
RFX1-207ENST00000589937 EPSTI1Q96J88 318 aa13.85□□□□□ -0.19
RFX1-207ENST00000589937 UROC1Q96N76 676 aa13.85□□□□□ -0.19
RFX1-207ENST00000589937 NTPCRQ9BSD7 190 aaKnown RBP13.85□□□□□ -0.19
RFX1-207ENST00000589937 RPP25Q9BUL9 199 aaKnown RBP13.85□□□□□ -0.19
RFX1-207ENST00000589937 TIPINQ9BVW5 301 aa13.85□□□□□ -0.19
RFX1-207ENST00000589937 RHOBTB2Q9BYZ6 727 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms