RNA–Protein interactions for RNA: ENST00000582844.5

CSNK1D-221, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 957 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-221ENST00000582844 REEP2Q9BRK0 252 aa23.31■■□□□ 1.32
CSNK1D-221ENST00000582844 BACH2Q9BYV9 841 aa23.31■■□□□ 1.32
CSNK1D-221ENST00000582844 KCNH6Q9H252 994 aa23.31■■□□□ 1.32
CSNK1D-221ENST00000582844 PIDD1Q9HB75 910 aa23.31■■□□□ 1.32
CSNK1D-221ENST00000582844 BLOC1S4Q9NUP1 217 aa23.31■■□□□ 1.32
CSNK1D-221ENST00000582844 LARSQ9P2J5 1176 aaKnown RBP23.31■■□□□ 1.32
CSNK1D-221ENST00000582844 ANKFY1Q9P2R3 1169 aa23.31■■□□□ 1.32
CSNK1D-221ENST00000582844 KMT2EQ8IZD2 1858 aa23.3■■□□□ 1.32
CSNK1D-221ENST00000582844 DOCK8Q8NF50 2099 aa23.3■■□□□ 1.32
CSNK1D-221ENST00000582844 I3L4J1 428 aa23.3■■□□□ 1.32
CSNK1D-221ENST00000582844 TOM1L1O75674 476 aa23.3■■□□□ 1.32
CSNK1D-221ENST00000582844 ZMYND10O75800 440 aa23.3■■□□□ 1.32
CSNK1D-221ENST00000582844 PAPLNO95428 1278 aa23.3■■□□□ 1.32
CSNK1D-221ENST00000582844 PLCG1P19174 1290 aa23.3■■□□□ 1.32
CSNK1D-221ENST00000582844 PDCP20941 246 aa23.3■■□□□ 1.32
CSNK1D-221ENST00000582844 FGFR3P22607 806 aa23.3■■□□□ 1.32
CSNK1D-221ENST00000582844 MCM6Q14566 821 aa23.3■■□□□ 1.32
CSNK1D-221ENST00000582844 KARSQ15046 597 aaKnown RBP23.3■■□□□ 1.32
CSNK1D-221ENST00000582844 GPBP1Q86WP2 473 aa23.3■■□□□ 1.32
CSNK1D-221ENST00000582844 PRKD2Q9BZL6 878 aa23.3■■□□□ 1.32
CSNK1D-221ENST00000582844 ZDHHC7Q9NXF8 308 aa23.3■■□□□ 1.32
CSNK1D-221ENST00000582844 CLIC4Q9Y696 253 aa23.3■■□□□ 1.32
CSNK1D-221ENST00000582844 KCNE1P15382 129 aa23.29■■□□□ 1.32
CSNK1D-221ENST00000582844 GBP2P32456 591 aaPredicted RBP23.29■■□□□ 1.32
CSNK1D-221ENST00000582844 BRCC3P46736 316 aa23.29■■□□□ 1.32
CSNK1D-221ENST00000582844 NCKAP1LP55160 1127 aa23.29■■□□□ 1.32
CSNK1D-221ENST00000582844 PDCD11Q14690 1871 aaKnown RBP23.29■■□□□ 1.32
CSNK1D-221ENST00000582844 PDXDC1Q6P996 788 aa23.29■■□□□ 1.32
CSNK1D-221ENST00000582844 ZPBP2Q6X784 338 aa23.29■■□□□ 1.32
CSNK1D-221ENST00000582844 HAUS6Q7Z4H7 955 aa23.29■■□□□ 1.32
CSNK1D-221ENST00000582844 RASSF8Q8NHQ8 419 aa23.29■■□□□ 1.32
CSNK1D-221ENST00000582844 SLC38A7Q9NVC3 462 aa23.29■■□□□ 1.32
CSNK1D-221ENST00000582844 FBXW11Q9UKB1 542 aa23.29■■□□□ 1.32
CSNK1D-221ENST00000582844 ODF2LQ9ULJ1 636 aa23.29■■□□□ 1.32
CSNK1D-221ENST00000582844 CLUHO75153 1309 aa23.29■■□□□ 1.32
CSNK1D-221ENST00000582844 SYT1P21579 422 aa23.28■■□□□ 1.32
CSNK1D-221ENST00000582844 OR1D2P34982 312 aa23.28■■□□□ 1.32
CSNK1D-221ENST00000582844 VCPP55072 806 aaKnown RBP23.28■■□□□ 1.32
CSNK1D-221ENST00000582844 NOLC1Q14978 699 aaKnown RBP eCLIP23.28■■□□□ 1.32
CSNK1D-221ENST00000582844 SLC10A6Q3KNW5 377 aa23.28■■□□□ 1.32
CSNK1D-221ENST00000582844 FAM173BQ6P4H8 233 aa23.28■■□□□ 1.32
CSNK1D-221ENST00000582844 RAD54LQ92698 747 aa23.28■■□□□ 1.32
CSNK1D-221ENST00000582844 STAMQ92783 540 aa23.28■■□□□ 1.32
CSNK1D-221ENST00000582844 C18orf25Q96B23 403 aaPredicted RBP23.28■■□□□ 1.32
CSNK1D-221ENST00000582844 DDX27Q96GQ7 796 aaKnown RBP23.28■■□□□ 1.32
CSNK1D-221ENST00000582844 HAPLN2Q9GZV7 340 aa23.28■■□□□ 1.32
CSNK1D-221ENST00000582844 KCNK12Q9HB15 430 aa23.28■■□□□ 1.32
CSNK1D-221ENST00000582844 CNTN3Q9P232 1028 aa23.28■■□□□ 1.32
CSNK1D-221ENST00000582844 CLDN3O15551 220 aa23.27■■□□□ 1.32
CSNK1D-221ENST00000582844 TRAPPC3O43617 180 aa23.27■■□□□ 1.32
CSNK1D-221ENST00000582844 TKTP29401 623 aaKnown RBP23.27■■□□□ 1.32
CSNK1D-221ENST00000582844 PTPAQ15257 358 aa23.27■■□□□ 1.32
CSNK1D-221ENST00000582844 SPECC1Q5M775 1068 aa23.27■■□□□ 1.32
CSNK1D-221ENST00000582844 RSPO2Q6UXX9 243 aaPredicted RBP23.27■■□□□ 1.32
CSNK1D-221ENST00000582844 USP49Q70CQ1 688 aa23.27■■□□□ 1.32
CSNK1D-221ENST00000582844 MYCT1Q8N699 235 aa23.27■■□□□ 1.32
CSNK1D-221ENST00000582844 EPSTI1Q96J88 318 aa23.27■■□□□ 1.32
CSNK1D-221ENST00000582844 MYADMQ96S97 322 aa23.27■■□□□ 1.32
CSNK1D-221ENST00000582844 MTRRQ9UBK8 725 aa23.27■■□□□ 1.32
CSNK1D-221ENST00000582844 H0YCG3 227 aa23.26■■□□□ 1.31
CSNK1D-221ENST00000582844 PODXLO00592 558 aa23.26■■□□□ 1.31
CSNK1D-221ENST00000582844 MARCKSP29966 332 aaPredicted RBP23.26■■□□□ 1.31
CSNK1D-221ENST00000582844 AVPR2P30518 371 aa23.26■■□□□ 1.31
CSNK1D-221ENST00000582844 HOXD11P31277 338 aaPredicted RBP23.26■■□□□ 1.31
CSNK1D-221ENST00000582844 MATR3P43243 847 aaKnown RBP eCLIP23.26■■□□□ 1.31
CSNK1D-221ENST00000582844 NHLH1Q02575 133 aa23.26■■□□□ 1.31
CSNK1D-221ENST00000582844 MCL1Q07820 350 aa23.26■■□□□ 1.31
CSNK1D-221ENST00000582844 RESTQ13127 1097 aa23.26■■□□□ 1.31
CSNK1D-221ENST00000582844 TDGQ13569 410 aa23.26■■□□□ 1.31
CSNK1D-221ENST00000582844 RAB33AQ14088 237 aa23.26■■□□□ 1.31
CSNK1D-221ENST00000582844 PRSS33Q8NF86 280 aa23.26■■□□□ 1.31
CSNK1D-221ENST00000582844 RSAD2Q8WXG1 361 aa23.26■■□□□ 1.31
CSNK1D-221ENST00000582844 BICD1Q96G01 975 aa23.26■■□□□ 1.31
CSNK1D-221ENST00000582844 CCSER1Q9C0I3 900 aa23.26■■□□□ 1.31
CSNK1D-221ENST00000582844 FOXD4L1Q9NU39 408 aa23.26■■□□□ 1.31
CSNK1D-221ENST00000582844 FAM13AO94988 1023 aa23.25■■□□□ 1.31
CSNK1D-221ENST00000582844 KRT18P05783 430 aaKnown RBP23.25■■□□□ 1.31
CSNK1D-221ENST00000582844 C8AP07357 584 aa23.25■■□□□ 1.31
CSNK1D-221ENST00000582844 ZNF131P52739 623 aa23.25■■□□□ 1.31
CSNK1D-221ENST00000582844 PPM1LQ5SGD2 360 aa23.25■■□□□ 1.31
CSNK1D-221ENST00000582844 LIN9Q5TKA1 542 aa23.25■■□□□ 1.31
CSNK1D-221ENST00000582844 ZHX3Q9H4I2 956 aa23.25■■□□□ 1.31
CSNK1D-221ENST00000582844 PARVGQ9HBI0 331 aa23.25■■□□□ 1.31
CSNK1D-221ENST00000582844 TBX20Q9UMR3 447 aa23.25■■□□□ 1.31
CSNK1D-221ENST00000582844 BACE2Q9Y5Z0 518 aa23.25■■□□□ 1.31
CSNK1D-221ENST00000582844 CDY1Q9Y6F8 540 aa23.25■■□□□ 1.31
CSNK1D-221ENST00000582844 K7ENM7 598 aa23.24■■□□□ 1.31
CSNK1D-221ENST00000582844 TRAK2O60296 914 aa23.24■■□□□ 1.31
CSNK1D-221ENST00000582844 CXCL8P10145 99 aa23.24■■□□□ 1.31
CSNK1D-221ENST00000582844 RPL9P32969 192 aaKnown RBP23.24■■□□□ 1.31
CSNK1D-221ENST00000582844 DDIT3P35638 169 aa23.24■■□□□ 1.31
CSNK1D-221ENST00000582844 CEBPZQ03701 1054 aaKnown RBP23.24■■□□□ 1.31
CSNK1D-221ENST00000582844 AXDND1Q5T1B0 1012 aaPredicted RBP23.24■■□□□ 1.31
CSNK1D-221ENST00000582844 ANKS3Q6ZW76 656 aa23.24■■□□□ 1.31
CSNK1D-221ENST00000582844 GRASPQ7Z6J2 395 aaPredicted RBP23.24■■□□□ 1.31
CSNK1D-221ENST00000582844 LARP4BQ92615 738 aaKnown RBP23.24■■□□□ 1.31
CSNK1D-221ENST00000582844 KCNN1Q92952 543 aa23.24■■□□□ 1.31
CSNK1D-221ENST00000582844 INTS4Q96HW7 963 aaKnown RBP23.24■■□□□ 1.31
CSNK1D-221ENST00000582844 IGSF9Q9P2J2 1179 aa23.24■■□□□ 1.31
CSNK1D-221ENST00000582844 EPS15L1Q9UBC2 864 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms