RNA–Protein interactions for RNA: ENST00000581108.5

CSNK1D-216, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 607 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-216ENST00000581108 REEP2Q9BRK0 252 aa23.31■■□□□ 1.32
CSNK1D-216ENST00000581108 BACH2Q9BYV9 841 aa23.31■■□□□ 1.32
CSNK1D-216ENST00000581108 KCNH6Q9H252 994 aa23.31■■□□□ 1.32
CSNK1D-216ENST00000581108 PIDD1Q9HB75 910 aa23.31■■□□□ 1.32
CSNK1D-216ENST00000581108 BLOC1S4Q9NUP1 217 aa23.31■■□□□ 1.32
CSNK1D-216ENST00000581108 LARSQ9P2J5 1176 aaKnown RBP23.31■■□□□ 1.32
CSNK1D-216ENST00000581108 ANKFY1Q9P2R3 1169 aa23.31■■□□□ 1.32
CSNK1D-216ENST00000581108 KMT2EQ8IZD2 1858 aa23.3■■□□□ 1.32
CSNK1D-216ENST00000581108 DOCK8Q8NF50 2099 aa23.3■■□□□ 1.32
CSNK1D-216ENST00000581108 I3L4J1 428 aa23.3■■□□□ 1.32
CSNK1D-216ENST00000581108 TOM1L1O75674 476 aa23.3■■□□□ 1.32
CSNK1D-216ENST00000581108 ZMYND10O75800 440 aa23.3■■□□□ 1.32
CSNK1D-216ENST00000581108 PAPLNO95428 1278 aa23.3■■□□□ 1.32
CSNK1D-216ENST00000581108 PLCG1P19174 1290 aa23.3■■□□□ 1.32
CSNK1D-216ENST00000581108 PDCP20941 246 aa23.3■■□□□ 1.32
CSNK1D-216ENST00000581108 FGFR3P22607 806 aa23.3■■□□□ 1.32
CSNK1D-216ENST00000581108 MCM6Q14566 821 aa23.3■■□□□ 1.32
CSNK1D-216ENST00000581108 KARSQ15046 597 aaKnown RBP23.3■■□□□ 1.32
CSNK1D-216ENST00000581108 GPBP1Q86WP2 473 aa23.3■■□□□ 1.32
CSNK1D-216ENST00000581108 PRKD2Q9BZL6 878 aa23.3■■□□□ 1.32
CSNK1D-216ENST00000581108 ZDHHC7Q9NXF8 308 aa23.3■■□□□ 1.32
CSNK1D-216ENST00000581108 CLIC4Q9Y696 253 aa23.3■■□□□ 1.32
CSNK1D-216ENST00000581108 KCNE1P15382 129 aa23.29■■□□□ 1.32
CSNK1D-216ENST00000581108 GBP2P32456 591 aaPredicted RBP23.29■■□□□ 1.32
CSNK1D-216ENST00000581108 BRCC3P46736 316 aa23.29■■□□□ 1.32
CSNK1D-216ENST00000581108 NCKAP1LP55160 1127 aa23.29■■□□□ 1.32
CSNK1D-216ENST00000581108 PDCD11Q14690 1871 aaKnown RBP23.29■■□□□ 1.32
CSNK1D-216ENST00000581108 PDXDC1Q6P996 788 aa23.29■■□□□ 1.32
CSNK1D-216ENST00000581108 ZPBP2Q6X784 338 aa23.29■■□□□ 1.32
CSNK1D-216ENST00000581108 HAUS6Q7Z4H7 955 aa23.29■■□□□ 1.32
CSNK1D-216ENST00000581108 RASSF8Q8NHQ8 419 aa23.29■■□□□ 1.32
CSNK1D-216ENST00000581108 SLC38A7Q9NVC3 462 aa23.29■■□□□ 1.32
CSNK1D-216ENST00000581108 FBXW11Q9UKB1 542 aa23.29■■□□□ 1.32
CSNK1D-216ENST00000581108 ODF2LQ9ULJ1 636 aa23.29■■□□□ 1.32
CSNK1D-216ENST00000581108 CLUHO75153 1309 aa23.29■■□□□ 1.32
CSNK1D-216ENST00000581108 SYT1P21579 422 aa23.28■■□□□ 1.32
CSNK1D-216ENST00000581108 OR1D2P34982 312 aa23.28■■□□□ 1.32
CSNK1D-216ENST00000581108 VCPP55072 806 aaKnown RBP23.28■■□□□ 1.32
CSNK1D-216ENST00000581108 NOLC1Q14978 699 aaKnown RBP eCLIP23.28■■□□□ 1.32
CSNK1D-216ENST00000581108 SLC10A6Q3KNW5 377 aa23.28■■□□□ 1.32
CSNK1D-216ENST00000581108 FAM173BQ6P4H8 233 aa23.28■■□□□ 1.32
CSNK1D-216ENST00000581108 RAD54LQ92698 747 aa23.28■■□□□ 1.32
CSNK1D-216ENST00000581108 STAMQ92783 540 aa23.28■■□□□ 1.32
CSNK1D-216ENST00000581108 C18orf25Q96B23 403 aaPredicted RBP23.28■■□□□ 1.32
CSNK1D-216ENST00000581108 DDX27Q96GQ7 796 aaKnown RBP23.28■■□□□ 1.32
CSNK1D-216ENST00000581108 HAPLN2Q9GZV7 340 aa23.28■■□□□ 1.32
CSNK1D-216ENST00000581108 KCNK12Q9HB15 430 aa23.28■■□□□ 1.32
CSNK1D-216ENST00000581108 CNTN3Q9P232 1028 aa23.28■■□□□ 1.32
CSNK1D-216ENST00000581108 CLDN3O15551 220 aa23.27■■□□□ 1.32
CSNK1D-216ENST00000581108 TRAPPC3O43617 180 aa23.27■■□□□ 1.32
CSNK1D-216ENST00000581108 TKTP29401 623 aaKnown RBP23.27■■□□□ 1.32
CSNK1D-216ENST00000581108 PTPAQ15257 358 aa23.27■■□□□ 1.32
CSNK1D-216ENST00000581108 SPECC1Q5M775 1068 aa23.27■■□□□ 1.32
CSNK1D-216ENST00000581108 RSPO2Q6UXX9 243 aaPredicted RBP23.27■■□□□ 1.32
CSNK1D-216ENST00000581108 USP49Q70CQ1 688 aa23.27■■□□□ 1.32
CSNK1D-216ENST00000581108 MYCT1Q8N699 235 aa23.27■■□□□ 1.32
CSNK1D-216ENST00000581108 EPSTI1Q96J88 318 aa23.27■■□□□ 1.32
CSNK1D-216ENST00000581108 MYADMQ96S97 322 aa23.27■■□□□ 1.32
CSNK1D-216ENST00000581108 MTRRQ9UBK8 725 aa23.27■■□□□ 1.32
CSNK1D-216ENST00000581108 H0YCG3 227 aa23.26■■□□□ 1.31
CSNK1D-216ENST00000581108 PODXLO00592 558 aa23.26■■□□□ 1.31
CSNK1D-216ENST00000581108 MARCKSP29966 332 aaPredicted RBP23.26■■□□□ 1.31
CSNK1D-216ENST00000581108 AVPR2P30518 371 aa23.26■■□□□ 1.31
CSNK1D-216ENST00000581108 HOXD11P31277 338 aaPredicted RBP23.26■■□□□ 1.31
CSNK1D-216ENST00000581108 MATR3P43243 847 aaKnown RBP eCLIP23.26■■□□□ 1.31
CSNK1D-216ENST00000581108 NHLH1Q02575 133 aa23.26■■□□□ 1.31
CSNK1D-216ENST00000581108 MCL1Q07820 350 aa23.26■■□□□ 1.31
CSNK1D-216ENST00000581108 RESTQ13127 1097 aa23.26■■□□□ 1.31
CSNK1D-216ENST00000581108 TDGQ13569 410 aa23.26■■□□□ 1.31
CSNK1D-216ENST00000581108 RAB33AQ14088 237 aa23.26■■□□□ 1.31
CSNK1D-216ENST00000581108 PRSS33Q8NF86 280 aa23.26■■□□□ 1.31
CSNK1D-216ENST00000581108 RSAD2Q8WXG1 361 aa23.26■■□□□ 1.31
CSNK1D-216ENST00000581108 BICD1Q96G01 975 aa23.26■■□□□ 1.31
CSNK1D-216ENST00000581108 CCSER1Q9C0I3 900 aa23.26■■□□□ 1.31
CSNK1D-216ENST00000581108 FOXD4L1Q9NU39 408 aa23.26■■□□□ 1.31
CSNK1D-216ENST00000581108 FAM13AO94988 1023 aa23.25■■□□□ 1.31
CSNK1D-216ENST00000581108 KRT18P05783 430 aaKnown RBP23.25■■□□□ 1.31
CSNK1D-216ENST00000581108 C8AP07357 584 aa23.25■■□□□ 1.31
CSNK1D-216ENST00000581108 ZNF131P52739 623 aa23.25■■□□□ 1.31
CSNK1D-216ENST00000581108 PPM1LQ5SGD2 360 aa23.25■■□□□ 1.31
CSNK1D-216ENST00000581108 LIN9Q5TKA1 542 aa23.25■■□□□ 1.31
CSNK1D-216ENST00000581108 ZHX3Q9H4I2 956 aa23.25■■□□□ 1.31
CSNK1D-216ENST00000581108 PARVGQ9HBI0 331 aa23.25■■□□□ 1.31
CSNK1D-216ENST00000581108 TBX20Q9UMR3 447 aa23.25■■□□□ 1.31
CSNK1D-216ENST00000581108 BACE2Q9Y5Z0 518 aa23.25■■□□□ 1.31
CSNK1D-216ENST00000581108 CDY1Q9Y6F8 540 aa23.25■■□□□ 1.31
CSNK1D-216ENST00000581108 K7ENM7 598 aa23.24■■□□□ 1.31
CSNK1D-216ENST00000581108 TRAK2O60296 914 aa23.24■■□□□ 1.31
CSNK1D-216ENST00000581108 CXCL8P10145 99 aa23.24■■□□□ 1.31
CSNK1D-216ENST00000581108 RPL9P32969 192 aaKnown RBP23.24■■□□□ 1.31
CSNK1D-216ENST00000581108 DDIT3P35638 169 aa23.24■■□□□ 1.31
CSNK1D-216ENST00000581108 CEBPZQ03701 1054 aaKnown RBP23.24■■□□□ 1.31
CSNK1D-216ENST00000581108 AXDND1Q5T1B0 1012 aaPredicted RBP23.24■■□□□ 1.31
CSNK1D-216ENST00000581108 ANKS3Q6ZW76 656 aa23.24■■□□□ 1.31
CSNK1D-216ENST00000581108 GRASPQ7Z6J2 395 aaPredicted RBP23.24■■□□□ 1.31
CSNK1D-216ENST00000581108 LARP4BQ92615 738 aaKnown RBP23.24■■□□□ 1.31
CSNK1D-216ENST00000581108 KCNN1Q92952 543 aa23.24■■□□□ 1.31
CSNK1D-216ENST00000581108 INTS4Q96HW7 963 aaKnown RBP23.24■■□□□ 1.31
CSNK1D-216ENST00000581108 IGSF9Q9P2J2 1179 aa23.24■■□□□ 1.31
CSNK1D-216ENST00000581108 EPS15L1Q9UBC2 864 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms