RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 ZNF761Q86XN6 746 aaPredicted RBP6.05□□□□□ -1.44
CAPN3-217ENST00000567817 GSTCDQ8NEC7 633 aa6.05□□□□□ -1.44
CAPN3-217ENST00000567817 ADAMTS17Q8TE56 1095 aa6.05□□□□□ -1.44
CAPN3-217ENST00000567817 CLEC4DQ8WXI8 215 aa6.05□□□□□ -1.44
CAPN3-217ENST00000567817 PIBF1Q8WXW3 757 aa6.05□□□□□ -1.44
CAPN3-217ENST00000567817 FBXW5Q969U6 566 aa6.05□□□□□ -1.44
CAPN3-217ENST00000567817 ERO1AQ96HE7 468 aa6.05□□□□□ -1.44
CAPN3-217ENST00000567817 TEPSINQ96N21 525 aa6.05□□□□□ -1.44
CAPN3-217ENST00000567817 CLIC6Q96NY7 704 aa6.05□□□□□ -1.44
CAPN3-217ENST00000567817 MRPL4Q9BYD3 311 aaKnown RBP6.05□□□□□ -1.44
CAPN3-217ENST00000567817 TNMDQ9H2S6 317 aa6.05□□□□□ -1.44
CAPN3-217ENST00000567817 SFMBT1Q9UHJ3 866 aa6.05□□□□□ -1.44
CAPN3-217ENST00000567817 ATP6V0A2Q9Y487 856 aa6.05□□□□□ -1.44
CAPN3-217ENST00000567817 PCDHA8Q9Y5H6 950 aa6.05□□□□□ -1.44
CAPN3-217ENST00000567817 AK9Q5TCS8 1911 aa6.05□□□□□ -1.44
CAPN3-217ENST00000567817 SZT2Q5T011 3432 aa6.04□□□□□ -1.44
CAPN3-217ENST00000567817 A0A1B0GUL7 405 aa6.04□□□□□ -1.44
CAPN3-217ENST00000567817 GSTA4O15217 222 aa6.04□□□□□ -1.44
CAPN3-217ENST00000567817 BBOX1O75936 387 aa6.04□□□□□ -1.44
CAPN3-217ENST00000567817 CDKL5O76039 1030 aa6.04□□□□□ -1.44
CAPN3-217ENST00000567817 LARGE1O95461 756 aa6.04□□□□□ -1.44
CAPN3-217ENST00000567817 CRTAMO95727 393 aa6.04□□□□□ -1.44
CAPN3-217ENST00000567817 CYP21A2P08686 494 aa6.04□□□□□ -1.44
CAPN3-217ENST00000567817 FAHP16930 419 aa6.04□□□□□ -1.44
CAPN3-217ENST00000567817 GJA9P57773 515 aa6.04□□□□□ -1.44
CAPN3-217ENST00000567817 IFIT5Q13325 482 aaKnown RBP6.04□□□□□ -1.44
CAPN3-217ENST00000567817 BMS1Q14692 1282 aaKnown RBP6.04□□□□□ -1.44
CAPN3-217ENST00000567817 GPR19Q15760 415 aa6.04□□□□□ -1.44
CAPN3-217ENST00000567817 PAN2Q504Q3 1202 aaKnown RBP6.04□□□□□ -1.44
CAPN3-217ENST00000567817 TAF7LQ5H9L4 462 aa6.04□□□□□ -1.44
CAPN3-217ENST00000567817 TTC39AQ5SRH9 613 aa6.04□□□□□ -1.44
CAPN3-217ENST00000567817 LCE1DQ5T752 114 aa6.04□□□□□ -1.44
CAPN3-217ENST00000567817 GORABQ5T7V8 394 aa6.04□□□□□ -1.44
CAPN3-217ENST00000567817 NT5DC1Q5TFE4 455 aa6.04□□□□□ -1.44
CAPN3-217ENST00000567817 CPLX2Q6PUV4 134 aaKnown RBP6.04□□□□□ -1.44
CAPN3-217ENST00000567817 SASS6Q6UVJ0 657 aa6.04□□□□□ -1.44
CAPN3-217ENST00000567817 DPP8Q6V1X1 898 aaPredicted RBP6.04□□□□□ -1.44
CAPN3-217ENST00000567817 Q6ZUG5 572 aa6.04□□□□□ -1.44
CAPN3-217ENST00000567817 ATG9AQ7Z3C6 839 aa6.04□□□□□ -1.44
CAPN3-217ENST00000567817 PROSER1Q86XN7 944 aa6.04□□□□□ -1.44
CAPN3-217ENST00000567817 PCDH19Q8TAB3 1148 aa6.04□□□□□ -1.44
CAPN3-217ENST00000567817 KLHDC4Q8TBB5 520 aa6.04□□□□□ -1.44
CAPN3-217ENST00000567817 BICD2Q8TD16 824 aa6.04□□□□□ -1.44
CAPN3-217ENST00000567817 LEO1Q8WVC0 666 aaPredicted RBP6.04□□□□□ -1.44
CAPN3-217ENST00000567817 APPBP2Q92624 585 aa6.04□□□□□ -1.44
CAPN3-217ENST00000567817 MRFAP1L1Q96HT8 127 aa6.04□□□□□ -1.44
CAPN3-217ENST00000567817 NEUROD6Q96NK8 337 aa6.04□□□□□ -1.44
CAPN3-217ENST00000567817 NAT10Q9H0A0 1025 aaKnown RBP6.04□□□□□ -1.44
CAPN3-217ENST00000567817 CLSTN2Q9H4D0 955 aa6.04□□□□□ -1.44
CAPN3-217ENST00000567817 DLL4Q9NR61 685 aa6.04□□□□□ -1.44
CAPN3-217ENST00000567817 USP40Q9NVE5 1235 aa6.04□□□□□ -1.44
CAPN3-217ENST00000567817 NDOR1Q9UHB4 597 aa6.04□□□□□ -1.44
CAPN3-217ENST00000567817 TELO2Q9Y4R8 837 aa6.04□□□□□ -1.44
CAPN3-217ENST00000567817 ERVV-1B6SEH8 477 aa6.03□□□□□ -1.44
CAPN3-217ENST00000567817 H0YGN5 161 aa6.03□□□□□ -1.44
CAPN3-217ENST00000567817 GOLIM4O00461 696 aa6.03□□□□□ -1.44
CAPN3-217ENST00000567817 DYNC1I1O14576 645 aa6.03□□□□□ -1.44
CAPN3-217ENST00000567817 NEMFO60524 1076 aa6.03□□□□□ -1.44
CAPN3-217ENST00000567817 ADCY5O95622 1261 aa6.03□□□□□ -1.44
CAPN3-217ENST00000567817 LTFP02788 710 aa6.03□□□□□ -1.44
CAPN3-217ENST00000567817 CSF1RP07333 972 aa6.03□□□□□ -1.44
CAPN3-217ENST00000567817 UQCRFS1P1P0C7P4 283 aa6.03□□□□□ -1.44
CAPN3-217ENST00000567817 HSPD1P10809 573 aaKnown RBP6.03□□□□□ -1.44
CAPN3-217ENST00000567817 ZNF28P17035 718 aa6.03□□□□□ -1.44
CAPN3-217ENST00000567817 CAPN2P17655 700 aa6.03□□□□□ -1.44
CAPN3-217ENST00000567817 NF2P35240 595 aa6.03□□□□□ -1.44
CAPN3-217ENST00000567817 EXOSC10Q01780 885 aaKnown RBP6.03□□□□□ -1.44
CAPN3-217ENST00000567817 GRIN1Q05586 938 aa6.03□□□□□ -1.44
CAPN3-217ENST00000567817 TRDNQ13061 729 aa6.03□□□□□ -1.44
CAPN3-217ENST00000567817 CHAF1AQ13111 956 aaPredicted RBP6.03□□□□□ -1.44
CAPN3-217ENST00000567817 RESTQ13127 1097 aa6.03□□□□□ -1.44
CAPN3-217ENST00000567817 FAM47CQ5HY64 1035 aa6.03□□□□□ -1.44
CAPN3-217ENST00000567817 VASNQ6EMK4 673 aa6.03□□□□□ -1.44
CAPN3-217ENST00000567817 TMED8Q6PL24 325 aaPredicted RBP6.03□□□□□ -1.44
CAPN3-217ENST00000567817 CCDC73Q6ZRK6 1079 aa6.03□□□□□ -1.44
CAPN3-217ENST00000567817 DDX46Q7L014 1031 aaKnown RBP6.03□□□□□ -1.44
CAPN3-217ENST00000567817 C16orf59Q7L2K0 433 aa6.03□□□□□ -1.44
CAPN3-217ENST00000567817 OTOP1Q7RTM1 612 aa6.03□□□□□ -1.44
CAPN3-217ENST00000567817 BRAPQ7Z569 592 aa6.03□□□□□ -1.44
CAPN3-217ENST00000567817 ZDHHC14Q8IZN3 488 aa6.03□□□□□ -1.44
CAPN3-217ENST00000567817 NLGN4XQ8N0W4 816 aa6.03□□□□□ -1.44
CAPN3-217ENST00000567817 LILRB2Q8N423 598 aa6.03□□□□□ -1.44
CAPN3-217ENST00000567817 NECAB1Q8N987 351 aa6.03□□□□□ -1.44
CAPN3-217ENST00000567817 NCOA7Q8NI08 942 aa6.03□□□□□ -1.44
CAPN3-217ENST00000567817 KCNG4Q8TDN1 519 aa6.03□□□□□ -1.44
CAPN3-217ENST00000567817 CDCA5Q96FF9 252 aa6.03□□□□□ -1.44
CAPN3-217ENST00000567817 ZSWIM3Q96MP5 696 aa6.03□□□□□ -1.44
CAPN3-217ENST00000567817 RCOR1Q9UKL0 485 aa6.03□□□□□ -1.44
CAPN3-217ENST00000567817 SRPK3Q9UPE1 567 aa6.03□□□□□ -1.44
CAPN3-217ENST00000567817 TRIM17Q9Y577 477 aa6.03□□□□□ -1.44
CAPN3-217ENST00000567817 PCDHA9Q9Y5H5 950 aa6.03□□□□□ -1.44
CAPN3-217ENST00000567817 DDX60Q8IY21 1712 aaKnown RBP6.02□□□□□ -1.45
CAPN3-217ENST00000567817 MAST3O60307 1309 aa6.02□□□□□ -1.45
CAPN3-217ENST00000567817 ZMYM6O95789 1325 aa6.02□□□□□ -1.45
CAPN3-217ENST00000567817 MAP3K15Q6ZN16 1313 aa6.02□□□□□ -1.45
CAPN3-217ENST00000567817 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.02□□□□□ -1.45
CAPN3-217ENST00000567817 TCRBV5S4A2TA0A5A2 114 aa6.02□□□□□ -1.45
CAPN3-217ENST00000567817 ANKRD18BA2A2Z9 1011 aa6.02□□□□□ -1.45
CAPN3-217ENST00000567817 PTPDC1A2A3K4 754 aa6.02□□□□□ -1.45
CAPN3-217ENST00000567817 ADM5C9JUS6 153 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms