RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 KCNH6Q9H252 994 aa15.12■□□□□ 0.01
PCNX4-209ENST00000555569 GOLGA2P5Q9HBQ8 144 aa15.12■□□□□ 0.01
PCNX4-209ENST00000555569 BLOC1S4Q9NUP1 217 aa15.12■□□□□ 0.01
PCNX4-209ENST00000555569 SLC38A7Q9NVC3 462 aa15.12■□□□□ 0.01
PCNX4-209ENST00000555569 ZDHHC7Q9NXF8 308 aa15.12■□□□□ 0.01
PCNX4-209ENST00000555569 ANKFY1Q9P2R3 1169 aa15.12■□□□□ 0.01
PCNX4-209ENST00000555569 PAPLNO95428 1278 aa15.11■□□□□ 0.01
PCNX4-209ENST00000555569 ASGR2P07307 311 aa15.11■□□□□ 0.01
PCNX4-209ENST00000555569 SYT1P21579 422 aa15.11■□□□□ 0.01
PCNX4-209ENST00000555569 FGFR3P22607 806 aa15.11■□□□□ 0.01
PCNX4-209ENST00000555569 IGFBP6P24592 240 aaPredicted RBP15.11■□□□□ 0.01
PCNX4-209ENST00000555569 NCKAP1LP55160 1127 aa15.11■□□□□ 0.01
PCNX4-209ENST00000555569 SOX4Q06945 474 aaPredicted RBP15.11■□□□□ 0.01
PCNX4-209ENST00000555569 RESTQ13127 1097 aa15.11■□□□□ 0.01
PCNX4-209ENST00000555569 MCM6Q14566 821 aa15.11■□□□□ 0.01
PCNX4-209ENST00000555569 CD300LGQ6UXG3 332 aa15.11■□□□□ 0.01
PCNX4-209ENST00000555569 SUGP1Q8IWZ8 645 aaKnown RBP15.11■□□□□ 0.01
PCNX4-209ENST00000555569 FBXL6Q8N531 539 aa15.11■□□□□ 0.01
PCNX4-209ENST00000555569 RAD54LQ92698 747 aa15.11■□□□□ 0.01
PCNX4-209ENST00000555569 ZNF707Q96C28 371 aaPredicted RBP15.11■□□□□ 0.01
PCNX4-209ENST00000555569 DDX27Q96GQ7 796 aaKnown RBP15.11■□□□□ 0.01
PCNX4-209ENST00000555569 INTS4Q96HW7 963 aaKnown RBP15.11■□□□□ 0.01
PCNX4-209ENST00000555569 CLSTN3Q9BQT9 956 aa15.11■□□□□ 0.01
PCNX4-209ENST00000555569 REEP2Q9BRK0 252 aa15.11■□□□□ 0.01
PCNX4-209ENST00000555569 WDR6Q9NNW5 1121 aaKnown RBP15.11■□□□□ 0.01
PCNX4-209ENST00000555569 CNTN3Q9P232 1028 aa15.11■□□□□ 0.01
PCNX4-209ENST00000555569 FBXW11Q9UKB1 542 aa15.11■□□□□ 0.01
PCNX4-209ENST00000555569 CLIC4Q9Y696 253 aa15.11■□□□□ 0.01
PCNX4-209ENST00000555569 CLUHO75153 1309 aa15.11■□□□□ 0.01
PCNX4-209ENST00000555569 KMT2EQ8IZD2 1858 aa15.1■□□□□ 0.01
PCNX4-209ENST00000555569 CLDN3O15551 220 aa15.1■□□□□ 0.01
PCNX4-209ENST00000555569 TRAPPC3O43617 180 aa15.1■□□□□ 0.01
PCNX4-209ENST00000555569 ZMYND10O75800 440 aa15.1■□□□□ 0.01
PCNX4-209ENST00000555569 FAM13AO94988 1023 aa15.1■□□□□ 0.01
PCNX4-209ENST00000555569 KCNE1P15382 129 aa15.1■□□□□ 0.01
PCNX4-209ENST00000555569 MATR3P43243 847 aaKnown RBP eCLIP15.1■□□□□ 0.01
PCNX4-209ENST00000555569 MCL1Q07820 350 aa15.1■□□□□ 0.01
PCNX4-209ENST00000555569 PTPAQ15257 358 aa15.1■□□□□ 0.01
PCNX4-209ENST00000555569 HAUS6Q7Z4H7 955 aa15.1■□□□□ 0.01
PCNX4-209ENST00000555569 C3orf58Q8NDZ4 430 aa15.1■□□□□ 0.01
PCNX4-209ENST00000555569 STAMQ92783 540 aa15.1■□□□□ 0.01
PCNX4-209ENST00000555569 KCNN1Q92952 543 aa15.1■□□□□ 0.01
PCNX4-209ENST00000555569 BICD1Q96G01 975 aa15.1■□□□□ 0.01
PCNX4-209ENST00000555569 ZMAT2Q96NC0 199 aaKnown RBP15.1■□□□□ 0.01
PCNX4-209ENST00000555569 PRKD2Q9BZL6 878 aa15.1■□□□□ 0.01
PCNX4-209ENST00000555569 CCSER1Q9C0I3 900 aa15.1■□□□□ 0.01
PCNX4-209ENST00000555569 PIDD1Q9HB75 910 aa15.1■□□□□ 0.01
PCNX4-209ENST00000555569 PARVGQ9HBI0 331 aa15.1■□□□□ 0.01
PCNX4-209ENST00000555569 K7ELQ4 463 aaPredicted RBP15.09■□□□□ 0.01
PCNX4-209ENST00000555569 PODXLO00592 558 aa15.09■□□□□ 0.01
PCNX4-209ENST00000555569 ADAM12O43184 909 aa15.09■□□□□ 0.01
PCNX4-209ENST00000555569 KRT18P05783 430 aaKnown RBP15.09■□□□□ 0.01
PCNX4-209ENST00000555569 SCP2P22307 547 aa15.09■□□□□ 0.01
PCNX4-209ENST00000555569 MARCKSP29966 332 aaPredicted RBP15.09■□□□□ 0.01
PCNX4-209ENST00000555569 BRCC3P46736 316 aa15.09■□□□□ 0.01
PCNX4-209ENST00000555569 ZNF131P52739 623 aa15.09■□□□□ 0.01
PCNX4-209ENST00000555569 SEZ6Q53EL9 994 aa15.09■□□□□ 0.01
PCNX4-209ENST00000555569 MYCT1Q8N699 235 aa15.09■□□□□ 0.01
PCNX4-209ENST00000555569 LARP4BQ92615 738 aaKnown RBP15.09■□□□□ 0.01
PCNX4-209ENST00000555569 SMOC2Q9H3U7 446 aa15.09■□□□□ 0.01
PCNX4-209ENST00000555569 FOXD4L1Q9NU39 408 aa15.09■□□□□ 0.01
PCNX4-209ENST00000555569 MTRRQ9UBK8 725 aa15.09■□□□□ 0.01
PCNX4-209ENST00000555569 I3L4J1 428 aa15.08■□□□□ 0
PCNX4-209ENST00000555569 K7ENM7 598 aa15.08■□□□□ 0
PCNX4-209ENST00000555569 MEFVO15553 781 aaPredicted RBP15.08■□□□□ 0
PCNX4-209ENST00000555569 N4BP1O75113 896 aaKnown RBP15.08■□□□□ 0
PCNX4-209ENST00000555569 TKTP29401 623 aaKnown RBP15.08■□□□□ 0
PCNX4-209ENST00000555569 GBP2P32456 591 aaPredicted RBP15.08■□□□□ 0
PCNX4-209ENST00000555569 RPL9P32969 192 aaKnown RBP15.08■□□□□ 0
PCNX4-209ENST00000555569 OR1D2P34982 312 aa15.08■□□□□ 0
PCNX4-209ENST00000555569 LIG4P49917 911 aa15.08■□□□□ 0
PCNX4-209ENST00000555569 RAB33AQ14088 237 aa15.08■□□□□ 0
PCNX4-209ENST00000555569 SLC10A6Q3KNW5 377 aa15.08■□□□□ 0
PCNX4-209ENST00000555569 SPECC1Q5M775 1068 aa15.08■□□□□ 0
PCNX4-209ENST00000555569 LIN9Q5TKA1 542 aa15.08■□□□□ 0
PCNX4-209ENST00000555569 FAM173BQ6P4H8 233 aa15.08■□□□□ 0
PCNX4-209ENST00000555569 ANKS3Q6ZW76 656 aa15.08■□□□□ 0
PCNX4-209ENST00000555569 USP49Q70CQ1 688 aa15.08■□□□□ 0
PCNX4-209ENST00000555569 C18orf25Q96B23 403 aaPredicted RBP15.08■□□□□ 0
PCNX4-209ENST00000555569 EPSTI1Q96J88 318 aa15.08■□□□□ 0
PCNX4-209ENST00000555569 HAPLN2Q9GZV7 340 aa15.08■□□□□ 0
PCNX4-209ENST00000555569 ZHX3Q9H4I2 956 aa15.08■□□□□ 0
PCNX4-209ENST00000555569 FBXO2Q9UK22 296 aaPredicted RBP15.08■□□□□ 0
PCNX4-209ENST00000555569 TBX20Q9UMR3 447 aa15.08■□□□□ 0
PCNX4-209ENST00000555569 MTMR6Q9Y217 621 aa15.08■□□□□ 0
PCNX4-209ENST00000555569 SRPRBQ9Y5M8 271 aaKnown RBP15.08■□□□□ 0
PCNX4-209ENST00000555569 MYH15Q9Y2K3 1946 aa15.07■□□□□ 0
PCNX4-209ENST00000555569 TRAK2O60296 914 aa15.07■□□□□ 0
PCNX4-209ENST00000555569 TBCAO75347 108 aaKnown RBP15.07■□□□□ 0
PCNX4-209ENST00000555569 PIGRP01833 764 aa15.07■□□□□ 0
PCNX4-209ENST00000555569 C8AP07357 584 aa15.07■□□□□ 0
PCNX4-209ENST00000555569 CLTAP09496 248 aa15.07■□□□□ 0
PCNX4-209ENST00000555569 HNRNPA1P09651 372 aaKnown RBP eCLIP15.07■□□□□ 0
PCNX4-209ENST00000555569 CXCL8P10145 99 aa15.07■□□□□ 0
PCNX4-209ENST00000555569 DDIT3P35638 169 aa15.07■□□□□ 0
PCNX4-209ENST00000555569 PPM1LQ5SGD2 360 aa15.07■□□□□ 0
PCNX4-209ENST00000555569 CLIC6Q96NY7 704 aa15.07■□□□□ 0
PCNX4-209ENST00000555569 MYADMQ96S97 322 aa15.07■□□□□ 0
PCNX4-209ENST00000555569 PLEKHA5Q9HAU0 1116 aa15.07■□□□□ 0
PCNX4-209ENST00000555569 KCNK12Q9HB15 430 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms