RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 MYH15Q9Y2K3 1946 aa11.94□□□□□ -0.5
TDP1-212ENST00000555565 ATRXP46100 2492 aa11.94□□□□□ -0.5
TDP1-212ENST00000555565 TTLL13PA6NNM8 815 aa11.94□□□□□ -0.5
TDP1-212ENST00000555565 CENPBP07199 599 aaPredicted RBP11.94□□□□□ -0.5
TDP1-212ENST00000555565 RPL17P18621 184 aaKnown RBP11.94□□□□□ -0.5
TDP1-212ENST00000555565 CYP11B2P19099 503 aa11.94□□□□□ -0.5
TDP1-212ENST00000555565 U2AF2P26368 475 aaKnown RBP eCLIP11.94□□□□□ -0.5
TDP1-212ENST00000555565 TRAPPC10P48553 1259 aa11.94□□□□□ -0.5
TDP1-212ENST00000555565 TOB1P50616 345 aaPredicted RBP11.94□□□□□ -0.5
TDP1-212ENST00000555565 FXR2P51116 673 aaKnown RBP eCLIP11.94□□□□□ -0.5
TDP1-212ENST00000555565 SPEM2Q0P670 501 aa11.94□□□□□ -0.5
TDP1-212ENST00000555565 MTAPQ13126 283 aa11.94□□□□□ -0.5
TDP1-212ENST00000555565 GNL2Q13823 731 aaKnown RBP11.94□□□□□ -0.5
TDP1-212ENST00000555565 ECM1Q16610 540 aa11.94□□□□□ -0.5
TDP1-212ENST00000555565 FAM187BQ17R55 369 aa11.94□□□□□ -0.5
TDP1-212ENST00000555565 ZBTB41Q5SVQ8 909 aa11.94□□□□□ -0.5
TDP1-212ENST00000555565 ELMSAN1Q6PJG2 1045 aa11.94□□□□□ -0.5
TDP1-212ENST00000555565 PADI6Q6TGC4 694 aa11.94□□□□□ -0.5
TDP1-212ENST00000555565 MAMSTRQ6ZN01 415 aa11.94□□□□□ -0.5
TDP1-212ENST00000555565 ERMNQ8TAM6 284 aa11.94□□□□□ -0.5
TDP1-212ENST00000555565 ITFG1Q8TB96 612 aa11.94□□□□□ -0.5
TDP1-212ENST00000555565 PRIMPOLQ96LW4 560 aa11.94□□□□□ -0.5
TDP1-212ENST00000555565 FZD8Q9H461 694 aa11.94□□□□□ -0.5
TDP1-212ENST00000555565 ARHGEF35A5YM69 484 aa11.93□□□□□ -0.5
TDP1-212ENST00000555565 MUTP22033 750 aa11.93□□□□□ -0.5
TDP1-212ENST00000555565 GLYCTKQ8IVS8 523 aa11.93□□□□□ -0.5
TDP1-212ENST00000555565 HACE1Q8IYU2 909 aa11.93□□□□□ -0.5
TDP1-212ENST00000555565 NETO1Q8TDF5 533 aa11.93□□□□□ -0.5
TDP1-212ENST00000555565 CHAMP1Q96JM3 812 aa11.93□□□□□ -0.5
TDP1-212ENST00000555565 NELL2Q99435 816 aa11.93□□□□□ -0.5
TDP1-212ENST00000555565 FAM126AQ9BYI3 521 aaPredicted RBP11.93□□□□□ -0.5
TDP1-212ENST00000555565 PLA2G2FQ9BZM2 168 aa11.93□□□□□ -0.5
TDP1-212ENST00000555565 CCDC113Q9H0I3 377 aa11.93□□□□□ -0.5
TDP1-212ENST00000555565 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.93□□□□□ -0.5
TDP1-212ENST00000555565 PRMT7Q9NVM4 692 aaPredicted RBP11.93□□□□□ -0.5
TDP1-212ENST00000555565 KLK14Q9P0G3 267 aa11.93□□□□□ -0.5
TDP1-212ENST00000555565 FBXW11Q9UKB1 542 aa11.93□□□□□ -0.5
TDP1-212ENST00000555565 NOL7Q9UMY1 257 aaKnown RBP11.93□□□□□ -0.5
TDP1-212ENST00000555565 USP20Q9Y2K6 914 aa11.93□□□□□ -0.5
TDP1-212ENST00000555565 PCDHB6Q9Y5E3 794 aa11.93□□□□□ -0.5
TDP1-212ENST00000555565 FRYQ5TBA9 3013 aa11.92□□□□□ -0.5
TDP1-212ENST00000555565 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.92□□□□□ -0.5
TDP1-212ENST00000555565 EDN1P05305 212 aa11.92□□□□□ -0.5
TDP1-212ENST00000555565 CCT6AP40227 531 aaKnown RBP11.92□□□□□ -0.5
TDP1-212ENST00000555565 NAMPTP43490 491 aa11.92□□□□□ -0.5
TDP1-212ENST00000555565 PFKPQ01813 784 aa11.92□□□□□ -0.5
TDP1-212ENST00000555565 PTGDRQ13258 359 aa11.92□□□□□ -0.5
TDP1-212ENST00000555565 COL9A2Q14055 689 aaPredicted RBP11.92□□□□□ -0.5
TDP1-212ENST00000555565 PDIA5Q14554 519 aa11.92□□□□□ -0.5
TDP1-212ENST00000555565 USP41Q3LFD5 358 aa11.92□□□□□ -0.5
TDP1-212ENST00000555565 RTP2Q5QGT7 225 aa11.92□□□□□ -0.5
TDP1-212ENST00000555565 HAUS3Q68CZ6 603 aa11.92□□□□□ -0.5
TDP1-212ENST00000555565 FUT10Q6P4F1 479 aa11.92□□□□□ -0.5
TDP1-212ENST00000555565 PRSS55Q6UWB4 352 aaPredicted RBP11.92□□□□□ -0.5
TDP1-212ENST00000555565 MTSS1LQ765P7 747 aa11.92□□□□□ -0.5
TDP1-212ENST00000555565 ZBTB8OSQ8IWT0 167 aa11.92□□□□□ -0.5
TDP1-212ENST00000555565 IGSF22Q8N9C0 903 aa11.92□□□□□ -0.5
TDP1-212ENST00000555565 RABGGTAQ92696 567 aa11.92□□□□□ -0.5
TDP1-212ENST00000555565 KXD1Q9BQD3 176 aa11.92□□□□□ -0.5
TDP1-212ENST00000555565 CLSTN3Q9BQT9 956 aa11.92□□□□□ -0.5
TDP1-212ENST00000555565 C2orf40Q9H1Z8 148 aa11.92□□□□□ -0.5
TDP1-212ENST00000555565 BHMT2Q9H2M3 363 aa11.92□□□□□ -0.5
TDP1-212ENST00000555565 PDZD7Q9H5P4 517 aa11.92□□□□□ -0.5
TDP1-212ENST00000555565 POLD4Q9HCU8 107 aa11.92□□□□□ -0.5
TDP1-212ENST00000555565 LRWD1Q9UFC0 647 aa11.92□□□□□ -0.5
TDP1-212ENST00000555565 PARP2Q9UGN5 583 aa11.92□□□□□ -0.5
TDP1-212ENST00000555565 NOTCH4Q99466 2003 aa11.92□□□□□ -0.5
TDP1-212ENST00000555565 TRIP11Q15643 1979 aa11.92□□□□□ -0.5
TDP1-212ENST00000555565 SPEGQ15772 3267 aa11.92□□□□□ -0.5
TDP1-212ENST00000555565 ZMYM2Q9UBW7 1377 aa11.92□□□□□ -0.5
TDP1-212ENST00000555565 ACKR2O00590 384 aa11.91□□□□□ -0.5
TDP1-212ENST00000555565 TM4SF5O14894 197 aa11.91□□□□□ -0.5
TDP1-212ENST00000555565 GDF9O60383 454 aa11.91□□□□□ -0.5
TDP1-212ENST00000555565 NR1I2O75469 434 aa11.91□□□□□ -0.5
TDP1-212ENST00000555565 PRKCBP05771 671 aa11.91□□□□□ -0.5
TDP1-212ENST00000555565 RETP07949 1114 aa11.91□□□□□ -0.5
TDP1-212ENST00000555565 HNRNPA1P09651 372 aaKnown RBP eCLIP11.91□□□□□ -0.5
TDP1-212ENST00000555565 HOXB3P14651 431 aaPredicted RBP11.91□□□□□ -0.5
TDP1-212ENST00000555565 PMLP29590 882 aa11.91□□□□□ -0.5
TDP1-212ENST00000555565 ADCY1Q08828 1119 aa11.91□□□□□ -0.5
TDP1-212ENST00000555565 GRIK3Q13003 919 aa11.91□□□□□ -0.5
TDP1-212ENST00000555565 PRPF4BQ13523 1007 aaKnown RBP11.91□□□□□ -0.5
TDP1-212ENST00000555565 LPAL2Q16609 132 aa11.91□□□□□ -0.5
TDP1-212ENST00000555565 MAPK6Q16659 721 aa11.91□□□□□ -0.5
TDP1-212ENST00000555565 EEF1DP3Q658K8 133 aa11.91□□□□□ -0.5
TDP1-212ENST00000555565 TPRG1Q6ZUI0 275 aa11.91□□□□□ -0.5
TDP1-212ENST00000555565 NPAS3Q8IXF0 933 aa11.91□□□□□ -0.5
TDP1-212ENST00000555565 CELF5Q8N6W0 485 aaKnown RBP11.91□□□□□ -0.5
TDP1-212ENST00000555565 DEPTORQ8TB45 409 aa11.91□□□□□ -0.5
TDP1-212ENST00000555565 PAAF1Q9BRP4 392 aa11.91□□□□□ -0.5
TDP1-212ENST00000555565 KIFC3Q9BVG8 833 aa11.91□□□□□ -0.5
TDP1-212ENST00000555565 COLEC11Q9BWP8 271 aa11.91□□□□□ -0.5
TDP1-212ENST00000555565 CXCL16Q9H2A7 254 aa11.91□□□□□ -0.5
TDP1-212ENST00000555565 DDX19AQ9NUU7 478 aaKnown RBP11.91□□□□□ -0.5
TDP1-212ENST00000555565 CACNG4Q9UBN1 327 aa11.91□□□□□ -0.5
TDP1-212ENST00000555565 GMEB2Q9UKD1 530 aa11.91□□□□□ -0.5
TDP1-212ENST00000555565 KIAA1024Q9UPX6 916 aa11.91□□□□□ -0.5
TDP1-212ENST00000555565 PP2D1A8MPX8 630 aa11.9□□□□□ -0.5
TDP1-212ENST00000555565 NRG2O14511 850 aaPredicted RBP11.9□□□□□ -0.5
TDP1-212ENST00000555565 PTGESO14684 152 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms