RNA–Protein interactions for RNA: ENST00000554018.1

TRAPPC6B-204, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 4

Gene TRAPPC6B, Length 541 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-204ENST00000554018 VCPP55072 806 aaKnown RBP13.02□□□□□ -0.33
TRAPPC6B-204ENST00000554018 STRN3Q13033 797 aa13.02□□□□□ -0.33
TRAPPC6B-204ENST00000554018 DHX8Q14562 1220 aaKnown RBP13.02□□□□□ -0.33
TRAPPC6B-204ENST00000554018 SF3A1Q15459 793 aaKnown RBP13.02□□□□□ -0.33
TRAPPC6B-204ENST00000554018 SEZ6Q53EL9 994 aa13.02□□□□□ -0.33
TRAPPC6B-204ENST00000554018 CYP26C1Q6V0L0 522 aa13.02□□□□□ -0.33
TRAPPC6B-204ENST00000554018 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.02□□□□□ -0.33
TRAPPC6B-204ENST00000554018 GPBP1Q86WP2 473 aa13.02□□□□□ -0.33
TRAPPC6B-204ENST00000554018 C3orf58Q8NDZ4 430 aa13.02□□□□□ -0.33
TRAPPC6B-204ENST00000554018 CALML4Q96GE6 196 aa13.02□□□□□ -0.33
TRAPPC6B-204ENST00000554018 SNX27Q96L92 541 aa13.02□□□□□ -0.33
TRAPPC6B-204ENST00000554018 UROC1Q96N76 676 aa13.02□□□□□ -0.33
TRAPPC6B-204ENST00000554018 ACAP3Q96P50 834 aa13.02□□□□□ -0.33
TRAPPC6B-204ENST00000554018 RHOBTB2Q9BYZ6 727 aa13.02□□□□□ -0.33
TRAPPC6B-204ENST00000554018 PRKD2Q9BZL6 878 aa13.02□□□□□ -0.33
TRAPPC6B-204ENST00000554018 KCNH6Q9H252 994 aa13.02□□□□□ -0.33
TRAPPC6B-204ENST00000554018 PIDD1Q9HB75 910 aa13.02□□□□□ -0.33
TRAPPC6B-204ENST00000554018 BLOC1S4Q9NUP1 217 aa13.02□□□□□ -0.33
TRAPPC6B-204ENST00000554018 KCND2Q9NZV8 630 aa13.02□□□□□ -0.33
TRAPPC6B-204ENST00000554018 ANKFY1Q9P2R3 1169 aa13.02□□□□□ -0.33
TRAPPC6B-204ENST00000554018 KCNG1Q9UIX4 513 aa13.02□□□□□ -0.33
TRAPPC6B-204ENST00000554018 CLUHO75153 1309 aa13.02□□□□□ -0.33
TRAPPC6B-204ENST00000554018 TMEM189-UBE2V1I3L0A0 370 aa13.01□□□□□ -0.33
TRAPPC6B-204ENST00000554018 SLC26A4O43511 780 aa13.01□□□□□ -0.33
TRAPPC6B-204ENST00000554018 TOM1L1O75674 476 aa13.01□□□□□ -0.33
TRAPPC6B-204ENST00000554018 ZMYND10O75800 440 aa13.01□□□□□ -0.33
TRAPPC6B-204ENST00000554018 BMP15O95972 392 aa13.01□□□□□ -0.33
TRAPPC6B-204ENST00000554018 KCNE1P15382 129 aa13.01□□□□□ -0.33
TRAPPC6B-204ENST00000554018 PLCG1P19174 1290 aa13.01□□□□□ -0.33
TRAPPC6B-204ENST00000554018 TKTP29401 623 aaKnown RBP13.01□□□□□ -0.33
TRAPPC6B-204ENST00000554018 HOXD11P31277 338 aaPredicted RBP13.01□□□□□ -0.33
TRAPPC6B-204ENST00000554018 GBP2P32456 591 aaPredicted RBP13.01□□□□□ -0.33
TRAPPC6B-204ENST00000554018 BRCC3P46736 316 aa13.01□□□□□ -0.33
TRAPPC6B-204ENST00000554018 NHLH1Q02575 133 aa13.01□□□□□ -0.33
TRAPPC6B-204ENST00000554018 NOLC1Q14978 699 aaKnown RBP eCLIP13.01□□□□□ -0.33
TRAPPC6B-204ENST00000554018 KARSQ15046 597 aaKnown RBP13.01□□□□□ -0.33
TRAPPC6B-204ENST00000554018 RSPO2Q6UXX9 243 aaPredicted RBP13.01□□□□□ -0.33
TRAPPC6B-204ENST00000554018 PRSS33Q8NF86 280 aa13.01□□□□□ -0.33
TRAPPC6B-204ENST00000554018 C18orf25Q96B23 403 aaPredicted RBP13.01□□□□□ -0.33
TRAPPC6B-204ENST00000554018 MYADMQ96S97 322 aa13.01□□□□□ -0.33
TRAPPC6B-204ENST00000554018 REEP2Q9BRK0 252 aa13.01□□□□□ -0.33
TRAPPC6B-204ENST00000554018 BACH2Q9BYV9 841 aa13.01□□□□□ -0.33
TRAPPC6B-204ENST00000554018 KCNK12Q9HB15 430 aa13.01□□□□□ -0.33
TRAPPC6B-204ENST00000554018 ZDHHC7Q9NXF8 308 aa13.01□□□□□ -0.33
TRAPPC6B-204ENST00000554018 FBXW11Q9UKB1 542 aa13.01□□□□□ -0.33
TRAPPC6B-204ENST00000554018 CLIC4Q9Y696 253 aa13.01□□□□□ -0.33
TRAPPC6B-204ENST00000554018 MYH15Q9Y2K3 1946 aa13.01□□□□□ -0.33
TRAPPC6B-204ENST00000554018 CFAP54Q96N23 3096 aa13□□□□□ -0.33
TRAPPC6B-204ENST00000554018 FRYLO94915 3013 aa13□□□□□ -0.33
TRAPPC6B-204ENST00000554018 PODXLO00592 558 aa13□□□□□ -0.33
TRAPPC6B-204ENST00000554018 PDCP20941 246 aa13□□□□□ -0.33
TRAPPC6B-204ENST00000554018 OR1D2P34982 312 aa13□□□□□ -0.33
TRAPPC6B-204ENST00000554018 LONP1P36776 959 aaKnown RBP13□□□□□ -0.33
TRAPPC6B-204ENST00000554018 NCKAP1LP55160 1127 aa13□□□□□ -0.33
TRAPPC6B-204ENST00000554018 TDGQ13569 410 aa13□□□□□ -0.33
TRAPPC6B-204ENST00000554018 MCM6Q14566 821 aa13□□□□□ -0.33
TRAPPC6B-204ENST00000554018 SLC10A6Q3KNW5 377 aa13□□□□□ -0.33
TRAPPC6B-204ENST00000554018 LIN9Q5TKA1 542 aa13□□□□□ -0.33
TRAPPC6B-204ENST00000554018 PDXDC1Q6P996 788 aa13□□□□□ -0.33
TRAPPC6B-204ENST00000554018 ZPBP2Q6X784 338 aa13□□□□□ -0.33
TRAPPC6B-204ENST00000554018 USP49Q70CQ1 688 aa13□□□□□ -0.33
TRAPPC6B-204ENST00000554018 HAUS6Q7Z4H7 955 aa13□□□□□ -0.33
TRAPPC6B-204ENST00000554018 RASSF8Q8NHQ8 419 aa13□□□□□ -0.33
TRAPPC6B-204ENST00000554018 RAD54LQ92698 747 aa13□□□□□ -0.33
TRAPPC6B-204ENST00000554018 STAMQ92783 540 aa13□□□□□ -0.33
TRAPPC6B-204ENST00000554018 DDX27Q96GQ7 796 aaKnown RBP13□□□□□ -0.33
TRAPPC6B-204ENST00000554018 HAPLN2Q9GZV7 340 aa13□□□□□ -0.33
TRAPPC6B-204ENST00000554018 SLC38A7Q9NVC3 462 aa13□□□□□ -0.33
TRAPPC6B-204ENST00000554018 CNTN3Q9P232 1028 aa13□□□□□ -0.33
TRAPPC6B-204ENST00000554018 LARSQ9P2J5 1176 aaKnown RBP13□□□□□ -0.33
TRAPPC6B-204ENST00000554018 MTRRQ9UBK8 725 aa13□□□□□ -0.33
TRAPPC6B-204ENST00000554018 SPTBN4Q9H254 2564 aa12.99□□□□□ -0.33
TRAPPC6B-204ENST00000554018 CLDN3O15551 220 aa12.99□□□□□ -0.33
TRAPPC6B-204ENST00000554018 TRAPPC3O43617 180 aa12.99□□□□□ -0.33
TRAPPC6B-204ENST00000554018 FAM13AO94988 1023 aa12.99□□□□□ -0.33
TRAPPC6B-204ENST00000554018 KRT18P05783 430 aaKnown RBP12.99□□□□□ -0.33
TRAPPC6B-204ENST00000554018 C8AP07357 584 aa12.99□□□□□ -0.33
TRAPPC6B-204ENST00000554018 SYT1P21579 422 aa12.99□□□□□ -0.33
TRAPPC6B-204ENST00000554018 MARCKSP29966 332 aaPredicted RBP12.99□□□□□ -0.33
TRAPPC6B-204ENST00000554018 AVPR2P30518 371 aa12.99□□□□□ -0.33
TRAPPC6B-204ENST00000554018 MATR3P43243 847 aaKnown RBP eCLIP12.99□□□□□ -0.33
TRAPPC6B-204ENST00000554018 MCL1Q07820 350 aa12.99□□□□□ -0.33
TRAPPC6B-204ENST00000554018 RESTQ13127 1097 aa12.99□□□□□ -0.33
TRAPPC6B-204ENST00000554018 RAB33AQ14088 237 aa12.99□□□□□ -0.33
TRAPPC6B-204ENST00000554018 PTPAQ15257 358 aa12.99□□□□□ -0.33
TRAPPC6B-204ENST00000554018 SPECC1Q5M775 1068 aa12.99□□□□□ -0.33
TRAPPC6B-204ENST00000554018 AXDND1Q5T1B0 1012 aaPredicted RBP12.99□□□□□ -0.33
TRAPPC6B-204ENST00000554018 FAM173BQ6P4H8 233 aa12.99□□□□□ -0.33
TRAPPC6B-204ENST00000554018 TMEM130Q8N3G9 435 aa12.99□□□□□ -0.33
TRAPPC6B-204ENST00000554018 MYCT1Q8N699 235 aa12.99□□□□□ -0.33
TRAPPC6B-204ENST00000554018 RSAD2Q8WXG1 361 aa12.99□□□□□ -0.33
TRAPPC6B-204ENST00000554018 BICD1Q96G01 975 aa12.99□□□□□ -0.33
TRAPPC6B-204ENST00000554018 EPSTI1Q96J88 318 aa12.99□□□□□ -0.33
TRAPPC6B-204ENST00000554018 FOXD4L1Q9NU39 408 aa12.99□□□□□ -0.33
TRAPPC6B-204ENST00000554018 EPS15L1Q9UBC2 864 aa12.99□□□□□ -0.33
TRAPPC6B-204ENST00000554018 ODF2LQ9ULJ1 636 aa12.99□□□□□ -0.33
TRAPPC6B-204ENST00000554018 CDY1Q9Y6F8 540 aa12.99□□□□□ -0.33
TRAPPC6B-204ENST00000554018 SCN1AP35498 2009 aa12.98□□□□□ -0.33
TRAPPC6B-204ENST00000554018 PTPRZ1P23471 2315 aaPredicted RBP12.98□□□□□ -0.33
TRAPPC6B-204ENST00000554018 H0YCG3 227 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms