RNA–Protein interactions for RNA: ENST00000550009.1

COX6A1-203, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

TSL 2

Gene COX6A1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-203ENST00000550009 RESTQ13127 1097 aa17.44■□□□□ 0.38
COX6A1-203ENST00000550009 SLC10A6Q3KNW5 377 aa17.44■□□□□ 0.38
COX6A1-203ENST00000550009 POTEHQ6S545 545 aa17.44■□□□□ 0.38
COX6A1-203ENST00000550009 MPZL3Q6UWV2 235 aa17.44■□□□□ 0.38
COX6A1-203ENST00000550009 C15orf39Q6ZRI6 1047 aa17.44■□□□□ 0.38
COX6A1-203ENST00000550009 CMASQ8NFW8 434 aaPredicted RBP17.44■□□□□ 0.38
COX6A1-203ENST00000550009 PIK3R5Q8WYR1 880 aa17.44■□□□□ 0.38
COX6A1-203ENST00000550009 DDX27Q96GQ7 796 aaKnown RBP17.44■□□□□ 0.38
COX6A1-203ENST00000550009 MFSD14AQ96MC6 490 aa17.44■□□□□ 0.38
COX6A1-203ENST00000550009 TCHPQ9BT92 498 aa17.44■□□□□ 0.38
COX6A1-203ENST00000550009 WDR6Q9NNW5 1121 aaKnown RBP17.44■□□□□ 0.38
COX6A1-203ENST00000550009 HCFC1R1Q9NWW0 138 aa17.44■□□□□ 0.38
COX6A1-203ENST00000550009 STK39Q9UEW8 545 aa17.44■□□□□ 0.38
COX6A1-203ENST00000550009 TUBGCP4Q9UGJ1 667 aa17.44■□□□□ 0.38
COX6A1-203ENST00000550009 SSX2IPQ9Y2D8 614 aa17.44■□□□□ 0.38
COX6A1-203ENST00000550009 ARIH1Q9Y4X5 557 aaPredicted RBP17.44■□□□□ 0.38
COX6A1-203ENST00000550009 CLUHO75153 1309 aa17.44■□□□□ 0.38
COX6A1-203ENST00000550009 TISP43B9A030 160 aa17.43■□□□□ 0.38
COX6A1-203ENST00000550009 NRG2O14511 850 aaPredicted RBP17.43■□□□□ 0.38
COX6A1-203ENST00000550009 CCL16O15467 120 aa17.43■□□□□ 0.38
COX6A1-203ENST00000550009 CXCL8P10145 99 aa17.43■□□□□ 0.38
COX6A1-203ENST00000550009 FGFR3P22607 806 aa17.43■□□□□ 0.38
COX6A1-203ENST00000550009 OR1D2P34982 312 aa17.43■□□□□ 0.38
COX6A1-203ENST00000550009 MTMR3Q13615 1198 aa17.43■□□□□ 0.38
COX6A1-203ENST00000550009 SLC39A4Q6P5W5 647 aa17.43■□□□□ 0.38
COX6A1-203ENST00000550009 GET4Q7L5D6 327 aaPredicted RBP17.43■□□□□ 0.38
COX6A1-203ENST00000550009 ALYREFQ86V81 257 aaKnown RBP17.43■□□□□ 0.38
COX6A1-203ENST00000550009 SPIRE2Q8WWL2 714 aa17.43■□□□□ 0.38
COX6A1-203ENST00000550009 CDK5RAP3Q96JB5 506 aa17.43■□□□□ 0.38
COX6A1-203ENST00000550009 FIZ1Q96SL8 496 aa17.43■□□□□ 0.38
COX6A1-203ENST00000550009 KCNK12Q9HB15 430 aa17.43■□□□□ 0.38
COX6A1-203ENST00000550009 FBXW11Q9UKB1 542 aa17.43■□□□□ 0.38
COX6A1-203ENST00000550009 USTQ9Y2C2 406 aa17.43■□□□□ 0.38
COX6A1-203ENST00000550009 PODXLO00592 558 aa17.42■□□□□ 0.38
COX6A1-203ENST00000550009 ZMYND10O75800 440 aa17.42■□□□□ 0.38
COX6A1-203ENST00000550009 MCF2P10911 925 aa17.42■□□□□ 0.38
COX6A1-203ENST00000550009 SYT1P21579 422 aa17.42■□□□□ 0.38
COX6A1-203ENST00000550009 NMT1P30419 496 aaKnown RBP17.42■□□□□ 0.38
COX6A1-203ENST00000550009 GBP2P32456 591 aaPredicted RBP17.42■□□□□ 0.38
COX6A1-203ENST00000550009 NCKAP1LP55160 1127 aa17.42■□□□□ 0.38
COX6A1-203ENST00000550009 GRASPQ7Z6J2 395 aaPredicted RBP17.42■□□□□ 0.38
COX6A1-203ENST00000550009 TMEM105Q8N8V8 129 aa17.42■□□□□ 0.38
COX6A1-203ENST00000550009 RAD54LQ92698 747 aa17.42■□□□□ 0.38
COX6A1-203ENST00000550009 ACAP3Q96P50 834 aa17.42■□□□□ 0.38
COX6A1-203ENST00000550009 RPP25Q9BUL9 199 aaKnown RBP17.42■□□□□ 0.38
COX6A1-203ENST00000550009 CCDC94Q9BW85 323 aaPredicted RBP17.42■□□□□ 0.38
COX6A1-203ENST00000550009 PRKD2Q9BZL6 878 aa17.42■□□□□ 0.38
COX6A1-203ENST00000550009 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.42■□□□□ 0.38
COX6A1-203ENST00000550009 FAM86C1Q9NVL1 165 aa17.42■□□□□ 0.38
COX6A1-203ENST00000550009 FBXO2Q9UK22 296 aaPredicted RBP17.42■□□□□ 0.38
COX6A1-203ENST00000550009 RBM19Q9Y4C8 960 aaKnown RBP17.42■□□□□ 0.38
COX6A1-203ENST00000550009 CDY1Q9Y6F8 540 aa17.42■□□□□ 0.38
COX6A1-203ENST00000550009 WDR87Q6ZQQ6 2873 aa17.41■□□□□ 0.38
COX6A1-203ENST00000550009 A0A087X0B3 334 aa17.41■□□□□ 0.38
COX6A1-203ENST00000550009 TMEM189-UBE2V1I3L0A0 370 aa17.41■□□□□ 0.38
COX6A1-203ENST00000550009 PAPLNO95428 1278 aa17.41■□□□□ 0.38
COX6A1-203ENST00000550009 KCNE1P15382 129 aa17.41■□□□□ 0.38
COX6A1-203ENST00000550009 AVPR2P30518 371 aa17.41■□□□□ 0.38
COX6A1-203ENST00000550009 UBA7P41226 1012 aa17.41■□□□□ 0.38
COX6A1-203ENST00000550009 NOLC1Q14978 699 aaKnown RBP eCLIP17.41■□□□□ 0.38
COX6A1-203ENST00000550009 ZC2HC1CQ53FD0 456 aaPredicted RBP17.41■□□□□ 0.38
COX6A1-203ENST00000550009 DCLRE1AQ6PJP8 1040 aa17.41■□□□□ 0.38
COX6A1-203ENST00000550009 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.41■□□□□ 0.38
COX6A1-203ENST00000550009 OTOP3Q7RTS5 596 aa17.41■□□□□ 0.38
COX6A1-203ENST00000550009 HAUS6Q7Z4H7 955 aa17.41■□□□□ 0.38
COX6A1-203ENST00000550009 PLEKHA4Q9H4M7 779 aa17.41■□□□□ 0.38
COX6A1-203ENST00000550009 PIDD1Q9HB75 910 aa17.41■□□□□ 0.38
COX6A1-203ENST00000550009 CNTN3Q9P232 1028 aa17.41■□□□□ 0.38
COX6A1-203ENST00000550009 MTRRQ9UBK8 725 aa17.41■□□□□ 0.38
COX6A1-203ENST00000550009 FRYLO94915 3013 aa17.41■□□□□ 0.38
COX6A1-203ENST00000550009 PPEF2O14830 753 aa17.4■□□□□ 0.38
COX6A1-203ENST00000550009 PI15O43692 258 aa17.4■□□□□ 0.38
COX6A1-203ENST00000550009 FAM189A1O60320 539 aa17.4■□□□□ 0.38
COX6A1-203ENST00000550009 TOM1L1O75674 476 aa17.4■□□□□ 0.38
COX6A1-203ENST00000550009 C8AP07357 584 aa17.4■□□□□ 0.38
COX6A1-203ENST00000550009 CDR1P51861 262 aa17.4■□□□□ 0.38
COX6A1-203ENST00000550009 YARSP54577 528 aaKnown RBP17.4■□□□□ 0.38
COX6A1-203ENST00000550009 MCL1Q07820 350 aa17.4■□□□□ 0.38
COX6A1-203ENST00000550009 STRN3Q13033 797 aa17.4■□□□□ 0.38
COX6A1-203ENST00000550009 BRAPQ7Z569 592 aa17.4■□□□□ 0.38
COX6A1-203ENST00000550009 SUGP1Q8IWZ8 645 aaKnown RBP17.4■□□□□ 0.38
COX6A1-203ENST00000550009 PLCD3Q8N3E9 789 aa17.4■□□□□ 0.38
COX6A1-203ENST00000550009 MYCT1Q8N699 235 aa17.4■□□□□ 0.38
COX6A1-203ENST00000550009 ITFG1Q8TB96 612 aa17.4■□□□□ 0.38
COX6A1-203ENST00000550009 SLC7A14Q8TBB6 771 aa17.4■□□□□ 0.38
COX6A1-203ENST00000550009 TIPINQ9BVW5 301 aa17.4■□□□□ 0.38
COX6A1-203ENST00000550009 ZHX3Q9H4I2 956 aa17.4■□□□□ 0.38
COX6A1-203ENST00000550009 C17orf75Q9HAS0 396 aa17.4■□□□□ 0.38
COX6A1-203ENST00000550009 MTMR6Q9Y217 621 aa17.4■□□□□ 0.38
COX6A1-203ENST00000550009 ANKRD63C9JTQ0 380 aa17.39■□□□□ 0.37
COX6A1-203ENST00000550009 K7ENM7 598 aa17.39■□□□□ 0.37
COX6A1-203ENST00000550009 NPR3P17342 541 aa17.39■□□□□ 0.37
COX6A1-203ENST00000550009 MATR3P43243 847 aaKnown RBP eCLIP17.39■□□□□ 0.37
COX6A1-203ENST00000550009 ZNF131P52739 623 aa17.39■□□□□ 0.37
COX6A1-203ENST00000550009 ARPP19P56211 112 aa17.39■□□□□ 0.37
COX6A1-203ENST00000550009 RAB33AQ14088 237 aa17.39■□□□□ 0.37
COX6A1-203ENST00000550009 AXDND1Q5T1B0 1012 aaPredicted RBP17.39■□□□□ 0.37
COX6A1-203ENST00000550009 CWF19L1Q69YN2 538 aaKnown RBP17.39■□□□□ 0.37
COX6A1-203ENST00000550009 DYMQ7RTS9 669 aa17.39■□□□□ 0.37
COX6A1-203ENST00000550009 GPR65Q8IYL9 337 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms