RNA–Protein interactions for RNA: ENST00000549752.1

CCDC38-207, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 476 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-207ENST00000549752 CCSER1Q9C0I3 900 aa11.43□□□□□ -0.58
CCDC38-207ENST00000549752 POLD4Q9HCU8 107 aa11.43□□□□□ -0.58
CCDC38-207ENST00000549752 CCDC39Q9UFE4 941 aa11.43□□□□□ -0.58
CCDC38-207ENST00000549752 FAM86C2PA6NEL3 165 aa11.42□□□□□ -0.58
CCDC38-207ENST00000549752 CASTOR2A6NHX0 329 aa11.42□□□□□ -0.58
CCDC38-207ENST00000549752 SFI1A8K8P3 1242 aa11.42□□□□□ -0.58
CCDC38-207ENST00000549752 PTGESO14684 152 aa11.42□□□□□ -0.58
CCDC38-207ENST00000549752 SLC16A4O15374 487 aa11.42□□□□□ -0.58
CCDC38-207ENST00000549752 TEX28O15482 410 aa11.42□□□□□ -0.58
CCDC38-207ENST00000549752 CLDN3O15551 220 aa11.42□□□□□ -0.58
CCDC38-207ENST00000549752 TBCAO75347 108 aaKnown RBP11.42□□□□□ -0.58
CCDC38-207ENST00000549752 FAM13AO94988 1023 aa11.42□□□□□ -0.58
CCDC38-207ENST00000549752 BRD1O95696 1058 aa11.42□□□□□ -0.58
CCDC38-207ENST00000549752 SYT1P21579 422 aa11.42□□□□□ -0.58
CCDC38-207ENST00000549752 RAD51AP2Q09MP3 1159 aa11.42□□□□□ -0.58
CCDC38-207ENST00000549752 NOLC1Q14978 699 aaKnown RBP eCLIP11.42□□□□□ -0.58
CCDC38-207ENST00000549752 DCLRE1AQ6PJP8 1040 aa11.42□□□□□ -0.58
CCDC38-207ENST00000549752 CCDC149Q6ZUS6 474 aa11.42□□□□□ -0.58
CCDC38-207ENST00000549752 OTOP3Q7RTS5 596 aa11.42□□□□□ -0.58
CCDC38-207ENST00000549752 GPBP1Q86WP2 473 aa11.42□□□□□ -0.58
CCDC38-207ENST00000549752 TMEM161BQ8NDZ6 487 aa11.42□□□□□ -0.58
CCDC38-207ENST00000549752 RIN2Q8WYP3 895 aaPredicted RBP11.42□□□□□ -0.58
CCDC38-207ENST00000549752 KCNN1Q92952 543 aa11.42□□□□□ -0.58
CCDC38-207ENST00000549752 BICD1Q96G01 975 aa11.42□□□□□ -0.58
CCDC38-207ENST00000549752 PLIN2Q99541 437 aa11.42□□□□□ -0.58
CCDC38-207ENST00000549752 TTPALQ9BTX7 342 aa11.42□□□□□ -0.58
CCDC38-207ENST00000549752 TARS2Q9BW92 718 aaKnown RBP11.42□□□□□ -0.58
CCDC38-207ENST00000549752 GPR62Q9BZJ7 368 aa11.42□□□□□ -0.58
CCDC38-207ENST00000549752 CDT1Q9H211 546 aa11.42□□□□□ -0.58
CCDC38-207ENST00000549752 KCNH6Q9H252 994 aa11.42□□□□□ -0.58
CCDC38-207ENST00000549752 POMKQ9H5K3 350 aa11.42□□□□□ -0.58
CCDC38-207ENST00000549752 C11orf16Q9NQ32 467 aa11.42□□□□□ -0.58
CCDC38-207ENST00000549752 MAN1C1Q9NR34 630 aa11.42□□□□□ -0.58
CCDC38-207ENST00000549752 STK17AQ9UEE5 414 aa11.42□□□□□ -0.58
CCDC38-207ENST00000549752 KMT2EQ8IZD2 1858 aa11.41□□□□□ -0.58
CCDC38-207ENST00000549752 B3GAT3O94766 335 aa11.41□□□□□ -0.58
CCDC38-207ENST00000549752 KIF4AO95239 1232 aa11.41□□□□□ -0.58
CCDC38-207ENST00000549752 EDN1P05305 212 aa11.41□□□□□ -0.58
CCDC38-207ENST00000549752 HSP90AA1P07900 732 aaKnown RBP11.41□□□□□ -0.58
CCDC38-207ENST00000549752 MAPTP10636 758 aaKnown RBP11.41□□□□□ -0.58
CCDC38-207ENST00000549752 PROZP22891 400 aa11.41□□□□□ -0.58
CCDC38-207ENST00000549752 MATR3P43243 847 aaKnown RBP eCLIP11.41□□□□□ -0.58
CCDC38-207ENST00000549752 ZXDAP98168 799 aa11.41□□□□□ -0.58
CCDC38-207ENST00000549752 PTPN21Q16825 1174 aa11.41□□□□□ -0.58
CCDC38-207ENST00000549752 FAM171A1Q5VUB5 890 aa11.41□□□□□ -0.58
CCDC38-207ENST00000549752 TMC5Q6UXY8 1006 aa11.41□□□□□ -0.58
CCDC38-207ENST00000549752 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.41□□□□□ -0.58
CCDC38-207ENST00000549752 TRIM67Q6ZTA4 783 aa11.41□□□□□ -0.58
CCDC38-207ENST00000549752 TAS1R1Q7RTX1 841 aa11.41□□□□□ -0.58
CCDC38-207ENST00000549752 BMP8AQ7Z5Y6 402 aa11.41□□□□□ -0.58
CCDC38-207ENST00000549752 CEP57Q86XR8 500 aa11.41□□□□□ -0.58
CCDC38-207ENST00000549752 UBALD2Q8IYN6 164 aa11.41□□□□□ -0.58
CCDC38-207ENST00000549752 ZDHHC14Q8IZN3 488 aa11.41□□□□□ -0.58
CCDC38-207ENST00000549752 PIK3R5Q8WYR1 880 aa11.41□□□□□ -0.58
CCDC38-207ENST00000549752 LARP4BQ92615 738 aaKnown RBP11.41□□□□□ -0.58
CCDC38-207ENST00000549752 PPP1R10Q96QC0 940 aaKnown RBP11.41□□□□□ -0.58
CCDC38-207ENST00000549752 TSPAN18Q96SJ8 248 aa11.41□□□□□ -0.58
CCDC38-207ENST00000549752 TMUB1Q9BVT8 246 aa11.41□□□□□ -0.58
CCDC38-207ENST00000549752 PARVGQ9HBI0 331 aa11.41□□□□□ -0.58
CCDC38-207ENST00000549752 PTPRHQ9HD43 1115 aa11.41□□□□□ -0.58
CCDC38-207ENST00000549752 ZDHHC7Q9NXF8 308 aa11.41□□□□□ -0.58
CCDC38-207ENST00000549752 USP20Q9Y2K6 914 aa11.41□□□□□ -0.58
CCDC38-207ENST00000549752 MORC2Q9Y6X9 1032 aaPredicted RBP11.41□□□□□ -0.58
CCDC38-207ENST00000549752 MUC6Q6W4X9 2439 aa11.41□□□□□ -0.58
CCDC38-207ENST00000549752 ZDBF2Q9HCK1 2354 aa11.41□□□□□ -0.58
CCDC38-207ENST00000549752 SMIM28A0A1B0GU29 152 aa11.4□□□□□ -0.58
CCDC38-207ENST00000549752 CCDC195A0A1B0GUA6 201 aa11.4□□□□□ -0.58
CCDC38-207ENST00000549752 XPOTO43592 962 aaKnown RBP11.4□□□□□ -0.58
CCDC38-207ENST00000549752 STX6O43752 255 aa11.4□□□□□ -0.58
CCDC38-207ENST00000549752 KCNE1P15382 129 aa11.4□□□□□ -0.58
CCDC38-207ENST00000549752 PLCG1P19174 1290 aa11.4□□□□□ -0.58
CCDC38-207ENST00000549752 RPL9P32969 192 aaKnown RBP11.4□□□□□ -0.58
CCDC38-207ENST00000549752 DDIT3P35638 169 aa11.4□□□□□ -0.58
CCDC38-207ENST00000549752 LIG4P49917 911 aa11.4□□□□□ -0.58
CCDC38-207ENST00000549752 NCKAP1LP55160 1127 aa11.4□□□□□ -0.58
CCDC38-207ENST00000549752 SIGLEC14Q08ET2 396 aa11.4□□□□□ -0.58
CCDC38-207ENST00000549752 MTMR3Q13615 1198 aa11.4□□□□□ -0.58
CCDC38-207ENST00000549752 DHX8Q14562 1220 aaKnown RBP11.4□□□□□ -0.58
CCDC38-207ENST00000549752 KARSQ15046 597 aaKnown RBP11.4□□□□□ -0.58
CCDC38-207ENST00000549752 NAB2Q15742 525 aa11.4□□□□□ -0.58
CCDC38-207ENST00000549752 PSMD5Q16401 504 aa11.4□□□□□ -0.58
CCDC38-207ENST00000549752 TSR1Q2NL82 804 aaKnown RBP11.4□□□□□ -0.58
CCDC38-207ENST00000549752 XKR4Q5GH76 650 aa11.4□□□□□ -0.58
CCDC38-207ENST00000549752 LIN9Q5TKA1 542 aa11.4□□□□□ -0.58
CCDC38-207ENST00000549752 ALKAL1Q6UXT8 129 aa11.4□□□□□ -0.58
CCDC38-207ENST00000549752 RTL10Q7L3V2 364 aa11.4□□□□□ -0.58
CCDC38-207ENST00000549752 HAUS6Q7Z4H7 955 aa11.4□□□□□ -0.58
CCDC38-207ENST00000549752 HSCBQ8IWL3 235 aa11.4□□□□□ -0.58
CCDC38-207ENST00000549752 MYCT1Q8N699 235 aa11.4□□□□□ -0.58
CCDC38-207ENST00000549752 C12orf76Q8N812 135 aaPredicted RBP11.4□□□□□ -0.58
CCDC38-207ENST00000549752 RAD54LQ92698 747 aa11.4□□□□□ -0.58
CCDC38-207ENST00000549752 SNX21Q969T3 373 aa11.4□□□□□ -0.58
CCDC38-207ENST00000549752 SNX27Q96L92 541 aa11.4□□□□□ -0.58
CCDC38-207ENST00000549752 REEP2Q9BRK0 252 aa11.4□□□□□ -0.58
CCDC38-207ENST00000549752 PLEKHA5Q9HAU0 1116 aa11.4□□□□□ -0.58
CCDC38-207ENST00000549752 PIDD1Q9HB75 910 aa11.4□□□□□ -0.58
CCDC38-207ENST00000549752 ANKFY1Q9P2R3 1169 aa11.4□□□□□ -0.58
CCDC38-207ENST00000549752 SORCS3Q9UPU3 1222 aa11.4□□□□□ -0.58
CCDC38-207ENST00000549752 SRPRBQ9Y5M8 271 aaKnown RBP11.4□□□□□ -0.58
CCDC38-207ENST00000549752 TMEM221A6NGB7 291 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms