RNA–Protein interactions for RNA: ENST00000549007.1

APAF1-208, Transcript of apoptotic peptidase activating factor 1, humanhuman

TSL 1 (best) BASIC

Gene APAF1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-208ENST00000549007 HGSO14964 777 aaPredicted RBP4.45□□□□□ -1.7
APAF1-208ENST00000549007 ZGLP1P0C6A0 271 aa4.45□□□□□ -1.7
APAF1-208ENST00000549007 HTR1BP28222 390 aa4.45□□□□□ -1.7
APAF1-208ENST00000549007 HTR3AP46098 478 aa4.45□□□□□ -1.7
APAF1-208ENST00000549007 PPM1FP49593 454 aaPredicted RBP4.45□□□□□ -1.7
APAF1-208ENST00000549007 AK2P54819 239 aa4.45□□□□□ -1.7
APAF1-208ENST00000549007 ZNF280AP59817 542 aaPredicted RBP4.45□□□□□ -1.7
APAF1-208ENST00000549007 MVPQ14764 893 aaKnown RBP4.45□□□□□ -1.7
APAF1-208ENST00000549007 NOLC1Q14978 699 aaKnown RBP eCLIP4.45□□□□□ -1.7
APAF1-208ENST00000549007 CCDC138Q96M89 665 aa4.45□□□□□ -1.7
APAF1-208ENST00000549007 SYT17Q9BSW7 474 aa4.45□□□□□ -1.7
APAF1-208ENST00000549007 NYXQ9GZU5 481 aa4.45□□□□□ -1.7
APAF1-208ENST00000549007 FAM204AQ9H8W3 233 aa4.45□□□□□ -1.7
APAF1-208ENST00000549007 IPPQ9Y573 584 aa4.45□□□□□ -1.7
APAF1-208ENST00000549007 COL24A1Q17RW2 1714 aa4.45□□□□□ -1.7
APAF1-208ENST00000549007 CACNA1FO60840 1977 aa4.45□□□□□ -1.7
APAF1-208ENST00000549007 NOTOA8MTQ0 251 aa4.45□□□□□ -1.7
APAF1-208ENST00000549007 HTRA2O43464 458 aaPredicted RBP4.45□□□□□ -1.7
APAF1-208ENST00000549007 ADKP55263 362 aaKnown RBP4.45□□□□□ -1.7
APAF1-208ENST00000549007 KRT85P78386 507 aa4.45□□□□□ -1.7
APAF1-208ENST00000549007 FOXO4P98177 505 aa4.45□□□□□ -1.7
APAF1-208ENST00000549007 CYP27A1Q02318 531 aa4.45□□□□□ -1.7
APAF1-208ENST00000549007 MROH9Q5TGP6 573 aa4.45□□□□□ -1.7
APAF1-208ENST00000549007 CC2D1AQ6P1N0 951 aaPredicted RBP4.45□□□□□ -1.7
APAF1-208ENST00000549007 ANKRD44Q8N8A2 993 aa4.45□□□□□ -1.7
APAF1-208ENST00000549007 FBXO18Q8NFZ0 1043 aa4.45□□□□□ -1.7
APAF1-208ENST00000549007 CELF1Q92879 486 aaKnown RBP4.45□□□□□ -1.7
APAF1-208ENST00000549007 IFT122Q9HBG6 1241 aa4.45□□□□□ -1.7
APAF1-208ENST00000549007 PA2G4Q9UQ80 394 aaKnown RBP4.45□□□□□ -1.7
APAF1-208ENST00000549007 TAF6LQ9Y6J9 622 aa4.45□□□□□ -1.7
APAF1-208ENST00000549007 TAF1P21675 1872 aa4.45□□□□□ -1.7
APAF1-208ENST00000549007 ANKRD31Q8N7Z5 1873 aa4.45□□□□□ -1.7
APAF1-208ENST00000549007 N4BP2Q86UW6 1770 aaPredicted RBP4.44□□□□□ -1.7
APAF1-208ENST00000549007 PXDNLA1KZ92 1463 aa4.44□□□□□ -1.7
APAF1-208ENST00000549007 ABHD14A-ACY1A0A1B0GW23 586 aa4.44□□□□□ -1.7
APAF1-208ENST00000549007 TBX3O15119 743 aa4.44□□□□□ -1.7
APAF1-208ENST00000549007 SETSIPP0DME0 302 aa4.44□□□□□ -1.7
APAF1-208ENST00000549007 CTSWP56202 376 aa4.44□□□□□ -1.7
APAF1-208ENST00000549007 SLC14A2Q15849 920 aa4.44□□□□□ -1.7
APAF1-208ENST00000549007 MUM1Q2TAK8 710 aa4.44□□□□□ -1.7
APAF1-208ENST00000549007 MBNL2Q5VZF2 373 aaKnown RBP4.44□□□□□ -1.7
APAF1-208ENST00000549007 ESPNLQ6ZVH7 1005 aa4.44□□□□□ -1.7
APAF1-208ENST00000549007 RPGRQ92834 1020 aaKnown RBP4.44□□□□□ -1.7
APAF1-208ENST00000549007 SGCZQ96LD1 299 aa4.44□□□□□ -1.7
APAF1-208ENST00000549007 BRIP1Q9BX63 1249 aa4.44□□□□□ -1.7
APAF1-208ENST00000549007 SIL1Q9H173 461 aa4.44□□□□□ -1.7
APAF1-208ENST00000549007 MTG2Q9H4K7 406 aa4.44□□□□□ -1.7
APAF1-208ENST00000549007 TPSG1Q9NRR2 321 aa4.44□□□□□ -1.7
APAF1-208ENST00000549007 PCDHB4Q9Y5E5 795 aa4.44□□□□□ -1.7
APAF1-208ENST00000549007 COL11A2P13942 1736 aaPredicted RBP4.44□□□□□ -1.7
APAF1-208ENST00000549007 PNMA6EA0A0J9YXQ4 647 aa4.44□□□□□ -1.7
APAF1-208ENST00000549007 H0YIN7 160 aa4.44□□□□□ -1.7
APAF1-208ENST00000549007 SNAP23O00161 211 aa4.44□□□□□ -1.7
APAF1-208ENST00000549007 ZBED1O96006 694 aa4.44□□□□□ -1.7
APAF1-208ENST00000549007 PRLP01236 227 aa4.44□□□□□ -1.7
APAF1-208ENST00000549007 KCNA3P22001 575 aa4.44□□□□□ -1.7
APAF1-208ENST00000549007 STAT5AP42229 794 aa4.44□□□□□ -1.7
APAF1-208ENST00000549007 SEMA5AQ13591 1074 aa4.44□□□□□ -1.7
APAF1-208ENST00000549007 RAPGEF1Q13905 1077 aa4.44□□□□□ -1.7
APAF1-208ENST00000549007 CNN3Q15417 329 aaKnown RBP4.44□□□□□ -1.7
APAF1-208ENST00000549007 TOGARAM2Q6ZUX3 1019 aa4.44□□□□□ -1.7
APAF1-208ENST00000549007 PAF1Q8N7H5 531 aa4.44□□□□□ -1.7
APAF1-208ENST00000549007 TTLL11Q8NHH1 800 aa4.44□□□□□ -1.7
APAF1-208ENST00000549007 SCYL1Q96KG9 808 aa4.44□□□□□ -1.7
APAF1-208ENST00000549007 ASH2LQ9UBL3 628 aa4.44□□□□□ -1.7
APAF1-208ENST00000549007 RNF123Q5XPI4 1314 aa4.44□□□□□ -1.7
APAF1-208ENST00000549007 ZC3H12DA2A288 527 aaKnown RBP4.44□□□□□ -1.7
APAF1-208ENST00000549007 SRGNP10124 158 aa4.44□□□□□ -1.7
APAF1-208ENST00000549007 HSP90AB4PQ58FF6 505 aa4.44□□□□□ -1.7
APAF1-208ENST00000549007 THAP5Q7Z6K1 395 aa4.44□□□□□ -1.7
APAF1-208ENST00000549007 PHYKPLQ8IUZ5 450 aa4.44□□□□□ -1.7
APAF1-208ENST00000549007 LINC01599Q8WXQ3 324 aa4.44□□□□□ -1.7
APAF1-208ENST00000549007 AUTS2Q8WXX7 1259 aa4.44□□□□□ -1.7
APAF1-208ENST00000549007 FAM193BQ96PV7 902 aaPredicted RBP4.44□□□□□ -1.7
APAF1-208ENST00000549007 ACE2Q9BYF1 805 aaPredicted RBP4.44□□□□□ -1.7
APAF1-208ENST00000549007 PUS3Q9BZE2 481 aaKnown RBP4.44□□□□□ -1.7
APAF1-208ENST00000549007 MAF1Q9H063 256 aa4.44□□□□□ -1.7
APAF1-208ENST00000549007 TMX4Q9H1E5 349 aaPredicted RBP4.44□□□□□ -1.7
APAF1-208ENST00000549007 ZMAT3Q9HA38 289 aaKnown RBP4.44□□□□□ -1.7
APAF1-208ENST00000549007 GJB4Q9NTQ9 266 aa4.44□□□□□ -1.7
APAF1-208ENST00000549007 GPRC5BQ9NZH0 403 aa4.44□□□□□ -1.7
APAF1-208ENST00000549007 CDHR2Q9BYE9 1310 aa4.43□□□□□ -1.7
APAF1-208ENST00000549007 DDX60Q8IY21 1712 aaKnown RBP4.43□□□□□ -1.7
APAF1-208ENST00000549007 TCRBV5S2A0A599 114 aa4.43□□□□□ -1.7
APAF1-208ENST00000549007 LRRC10BA6NIK2 292 aa4.43□□□□□ -1.7
APAF1-208ENST00000549007 FAM227AF5H4B4 570 aa4.43□□□□□ -1.7
APAF1-208ENST00000549007 TUSC2O75896 110 aa4.43□□□□□ -1.7
APAF1-208ENST00000549007 GNAI2P04899 355 aa4.43□□□□□ -1.7
APAF1-208ENST00000549007 CHKAP35790 457 aa4.43□□□□□ -1.7
APAF1-208ENST00000549007 SLC10A5Q5PT55 438 aa4.43□□□□□ -1.7
APAF1-208ENST00000549007 KLHDC7AQ5VTJ3 777 aa4.43□□□□□ -1.7
APAF1-208ENST00000549007 SLFN12LQ6IEE8 588 aa4.43□□□□□ -1.7
APAF1-208ENST00000549007 GAREM2Q75VX8 874 aa4.43□□□□□ -1.7
APAF1-208ENST00000549007 TMPRSS7Q7RTY8 843 aa4.43□□□□□ -1.7
APAF1-208ENST00000549007 EIF2AK1Q9BQI3 630 aaKnown RBP4.43□□□□□ -1.7
APAF1-208ENST00000549007 PDLIM7Q9NR12 457 aa4.43□□□□□ -1.7
APAF1-208ENST00000549007 NRXN2Q9P2S2 1712 aa4.43□□□□□ -1.7
APAF1-208ENST00000549007 IBTKQ9P2D0 1353 aaPredicted RBP4.43□□□□□ -1.7
APAF1-208ENST00000549007 CFAP69A5D8W1 941 aa4.43□□□□□ -1.7
APAF1-208ENST00000549007 DDX3XO00571 662 aaKnown RBP eCLIP4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms