RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 TOM1L1O75674 476 aa17.1■□□□□ 0.33
VARS2-212ENST00000542001 MYCP01106 439 aaPredicted RBP17.1■□□□□ 0.33
VARS2-212ENST00000542001 GBP1P32455 592 aa17.1■□□□□ 0.33
VARS2-212ENST00000542001 YWHAEP62258 255 aaKnown RBP17.1■□□□□ 0.33
VARS2-212ENST00000542001 MYO1EQ12965 1108 aa17.1■□□□□ 0.33
VARS2-212ENST00000542001 ZNF772Q68DY9 489 aaPredicted RBP17.1■□□□□ 0.33
VARS2-212ENST00000542001 BBOF1Q8ND07 529 aa17.1■□□□□ 0.33
VARS2-212ENST00000542001 SYTL5Q8TDW5 730 aaPredicted RBP17.1■□□□□ 0.33
VARS2-212ENST00000542001 FAF2Q96CS3 445 aa17.1■□□□□ 0.33
VARS2-212ENST00000542001 ATXN7L3BQ96GX2 97 aa17.1■□□□□ 0.33
VARS2-212ENST00000542001 GMCL1Q96IK5 515 aa17.1■□□□□ 0.33
VARS2-212ENST00000542001 ETNK1Q9HBU6 452 aa17.1■□□□□ 0.33
VARS2-212ENST00000542001 KCNMB3Q9NPA1 279 aa17.1■□□□□ 0.33
VARS2-212ENST00000542001 GGA3Q9NZ52 723 aa17.1■□□□□ 0.33
VARS2-212ENST00000542001 TRAF3IP3Q9Y228 551 aa17.1■□□□□ 0.33
VARS2-212ENST00000542001 FNDC3AQ9Y2H6 1198 aaKnown RBP17.1■□□□□ 0.33
VARS2-212ENST00000542001 ANKRD63C9JTQ0 380 aa17.1■□□□□ 0.33
VARS2-212ENST00000542001 ATP9AO75110 1047 aa17.1■□□□□ 0.33
VARS2-212ENST00000542001 DGAT1O75907 488 aa17.1■□□□□ 0.33
VARS2-212ENST00000542001 ZBED1O96006 694 aa17.1■□□□□ 0.33
VARS2-212ENST00000542001 FLT3P36888 993 aa17.1■□□□□ 0.33
VARS2-212ENST00000542001 EMC2Q15006 297 aa17.1■□□□□ 0.33
VARS2-212ENST00000542001 SLFN12LQ6IEE8 588 aa17.1■□□□□ 0.33
VARS2-212ENST00000542001 C1orf131Q8NDD1 294 aaKnown RBP17.1■□□□□ 0.33
VARS2-212ENST00000542001 FAM167BQ9BTA0 163 aa17.1■□□□□ 0.33
VARS2-212ENST00000542001 TEX13BQ9BXU2 312 aa17.1■□□□□ 0.33
VARS2-212ENST00000542001 ELP3Q9H9T3 547 aa17.1■□□□□ 0.33
VARS2-212ENST00000542001 WDR46O15213 610 aaKnown RBP17.09■□□□□ 0.33
VARS2-212ENST00000542001 EIF3DO15371 548 aaKnown RBP eCLIP17.09■□□□□ 0.333e-6■■■□□ 15.5
VARS2-212ENST00000542001 PGK2P07205 417 aa17.09■□□□□ 0.33
VARS2-212ENST00000542001 DHX34Q14147 1143 aaKnown RBP17.09■□□□□ 0.33
VARS2-212ENST00000542001 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.09■□□□□ 0.33
VARS2-212ENST00000542001 LRRC34Q8IZ02 419 aa17.09■□□□□ 0.33
VARS2-212ENST00000542001 SPATA33Q96N06 139 aa17.09■□□□□ 0.33
VARS2-212ENST00000542001 ZSWIM1Q9BR11 485 aa17.09■□□□□ 0.33
VARS2-212ENST00000542001 CARD9Q9H257 536 aa17.09■□□□□ 0.33
VARS2-212ENST00000542001 HOXC10Q9NYD6 342 aa17.09■□□□□ 0.33
VARS2-212ENST00000542001 ASTN1O14525 1302 aa17.09■□□□□ 0.33
VARS2-212ENST00000542001 PRLRP16471 622 aa17.09■□□□□ 0.33
VARS2-212ENST00000542001 ACTR2P61160 394 aa17.09■□□□□ 0.33
VARS2-212ENST00000542001 LGSNQ5TDP6 509 aa17.09■□□□□ 0.33
VARS2-212ENST00000542001 NXNQ6DKJ4 435 aa17.09■□□□□ 0.33
VARS2-212ENST00000542001 UBA3Q8TBC4 463 aa17.09■□□□□ 0.33
VARS2-212ENST00000542001 MOV10L1Q9BXT6 1211 aaKnown RBP17.09■□□□□ 0.33
VARS2-212ENST00000542001 NOL4O94818 638 aa17.09■□□□□ 0.33
VARS2-212ENST00000542001 COILP38432 576 aaPredicted RBP17.09■□□□□ 0.33
VARS2-212ENST00000542001 CORO7P57737 925 aa17.09■□□□□ 0.33
VARS2-212ENST00000542001 LMNB2Q03252 620 aa17.09■□□□□ 0.33
VARS2-212ENST00000542001 BYSLQ13895 437 aaKnown RBP17.09■□□□□ 0.33
VARS2-212ENST00000542001 NT5DC3Q86UY8 548 aa17.09■□□□□ 0.33
VARS2-212ENST00000542001 ZNF280CQ8ND82 737 aa17.09■□□□□ 0.33
VARS2-212ENST00000542001 SLC17A8Q8NDX2 589 aa17.09■□□□□ 0.33
VARS2-212ENST00000542001 N4BP2L2Q92802 583 aaPredicted RBP17.09■□□□□ 0.33
VARS2-212ENST00000542001 SNF8Q96H20 258 aa17.09■□□□□ 0.33
VARS2-212ENST00000542001 MKNK1Q9BUB5 465 aa17.09■□□□□ 0.33
VARS2-212ENST00000542001 CD248Q9HCU0 757 aa17.09■□□□□ 0.33
VARS2-212ENST00000542001 HACL1Q9UJ83 578 aa17.09■□□□□ 0.33
VARS2-212ENST00000542001 CPP00450 1065 aa17.08■□□□□ 0.33
VARS2-212ENST00000542001 CDH6P55285 790 aa17.08■□□□□ 0.33
VARS2-212ENST00000542001 MUM1Q2TAK8 710 aa17.08■□□□□ 0.33
VARS2-212ENST00000542001 MDH1BQ5I0G3 518 aa17.08■□□□□ 0.33
VARS2-212ENST00000542001 EMC1Q8N766 993 aa17.08■□□□□ 0.33
VARS2-212ENST00000542001 DNAAF3Q8N9W5 541 aa17.08■□□□□ 0.33
VARS2-212ENST00000542001 AGR3Q8TD06 166 aa17.08■□□□□ 0.33
VARS2-212ENST00000542001 DDX23Q9BUQ8 820 aaKnown RBP17.08■□□□□ 0.33
VARS2-212ENST00000542001 KCTD10Q9H3F6 313 aa17.08■□□□□ 0.33
VARS2-212ENST00000542001 FAM49BQ9NUQ9 324 aa17.08■□□□□ 0.33
VARS2-212ENST00000542001 SCINQ9Y6U3 715 aa17.08■□□□□ 0.33
VARS2-212ENST00000542001 TGFB1I1O43294 461 aa17.08■□□□□ 0.32
VARS2-212ENST00000542001 ICAM1P05362 532 aa17.08■□□□□ 0.32
VARS2-212ENST00000542001 ITGB5P18084 799 aa17.08■□□□□ 0.32
VARS2-212ENST00000542001 TFDP1Q14186 410 aa17.08■□□□□ 0.32
VARS2-212ENST00000542001 KIRREL3Q8IZU9 778 aa17.08■□□□□ 0.32
VARS2-212ENST00000542001 LNX1Q8TBB1 728 aaPredicted RBP17.08■□□□□ 0.32
VARS2-212ENST00000542001 CYTH2Q99418 400 aa17.08■□□□□ 0.32
VARS2-212ENST00000542001 GANQ9H2C0 597 aa17.08■□□□□ 0.32
VARS2-212ENST00000542001 MARCOQ9UEW3 520 aaPredicted RBP17.08■□□□□ 0.32
VARS2-212ENST00000542001 HOXA10P31260 410 aaPredicted RBP17.08■□□□□ 0.32
VARS2-212ENST00000542001 Q4G0T1 1027 aa17.08■□□□□ 0.32
VARS2-212ENST00000542001 HGSNATQ68CP4 663 aa17.08■□□□□ 0.32
VARS2-212ENST00000542001 GPAT2Q6NUI2 795 aa17.08■□□□□ 0.32
VARS2-212ENST00000542001 CEP128Q6ZU80 1094 aa17.08■□□□□ 0.32
VARS2-212ENST00000542001 NOP9Q86U38 636 aaKnown RBP17.08■□□□□ 0.32
VARS2-212ENST00000542001 MAP7D3Q8IWC1 876 aa17.08■□□□□ 0.32
VARS2-212ENST00000542001 ATL2Q8NHH9 583 aa17.08■□□□□ 0.32
VARS2-212ENST00000542001 VCAM1P19320 739 aa17.07■□□□□ 0.32
VARS2-212ENST00000542001 CALRP27797 417 aaKnown RBP17.07■□□□□ 0.32
VARS2-212ENST00000542001 DNAJC3Q13217 504 aa17.07■□□□□ 0.32
VARS2-212ENST00000542001 C1orf186Q6ZWK4 172 aa17.07■□□□□ 0.32
VARS2-212ENST00000542001 IRF2BP2Q7Z5L9 587 aa17.07■□□□□ 0.32
VARS2-212ENST00000542001 PDCD2LQ9BRP1 358 aa17.07■□□□□ 0.32
VARS2-212ENST00000542001 TMEM8AQ9HCN3 771 aa17.07■□□□□ 0.32
VARS2-212ENST00000542001 RGPD5Q99666 1765 aa17.07■□□□□ 0.32
VARS2-212ENST00000542001 KRT3P12035 628 aa17.07■□□□□ 0.32
VARS2-212ENST00000542001 YY1P25490 414 aa17.07■□□□□ 0.32
VARS2-212ENST00000542001 AMHR2Q16671 573 aa17.07■□□□□ 0.32
VARS2-212ENST00000542001 DUOXA2Q1HG44 320 aa17.07■□□□□ 0.32
VARS2-212ENST00000542001 XKR3Q5GH77 459 aa17.07■□□□□ 0.32
VARS2-212ENST00000542001 CATSPER4Q7RTX7 472 aa17.07■□□□□ 0.32
VARS2-212ENST00000542001 ZSWIM2Q8NEG5 633 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms