RNA–Protein interactions for RNA: ENST00000541102.1

LTBR-209, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5 BASIC

Gene LTBR, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-209ENST00000541102 SP100P23497 879 aaPredicted RBP15.55■□□□□ 0.08
LTBR-209ENST00000541102 CLCN4P51793 760 aa15.55■□□□□ 0.08
LTBR-209ENST00000541102 ZNF131P52739 623 aa15.55■□□□□ 0.08
LTBR-209ENST00000541102 DSG1Q02413 1049 aa15.55■□□□□ 0.08
LTBR-209ENST00000541102 NAB2Q15742 525 aa15.55■□□□□ 0.08
LTBR-209ENST00000541102 SEZ6Q53EL9 994 aa15.55■□□□□ 0.08
LTBR-209ENST00000541102 MPZL3Q6UWV2 235 aa15.55■□□□□ 0.08
LTBR-209ENST00000541102 KRBA2Q6ZNG9 492 aa15.55■□□□□ 0.08
LTBR-209ENST00000541102 CEP57Q86XR8 500 aa15.55■□□□□ 0.08
LTBR-209ENST00000541102 RNF135Q8IUD6 432 aa15.55■□□□□ 0.08
LTBR-209ENST00000541102 GLYCTKQ8IVS8 523 aa15.55■□□□□ 0.08
LTBR-209ENST00000541102 RNF168Q8IYW5 571 aaPredicted RBP15.55■□□□□ 0.08
LTBR-209ENST00000541102 HPS3Q969F9 1004 aa15.55■□□□□ 0.08
LTBR-209ENST00000541102 BICD1Q96G01 975 aa15.55■□□□□ 0.08
LTBR-209ENST00000541102 FBXL18Q96ME1 805 aa15.55■□□□□ 0.08
LTBR-209ENST00000541102 TRIM9Q9C026 710 aa15.55■□□□□ 0.08
LTBR-209ENST00000541102 TNMDQ9H2S6 317 aa15.55■□□□□ 0.08
LTBR-209ENST00000541102 CUEDC2Q9H467 287 aa15.55■□□□□ 0.08
LTBR-209ENST00000541102 PARVGQ9HBI0 331 aa15.55■□□□□ 0.08
LTBR-209ENST00000541102 CHST7Q9NS84 486 aa15.55■□□□□ 0.08
LTBR-209ENST00000541102 LMBRD1Q9NUN5 540 aa15.55■□□□□ 0.08
LTBR-209ENST00000541102 SF3B1O75533 1304 aaKnown RBP eCLIP15.54■□□□□ 0.08
LTBR-209ENST00000541102 SMIM28A0A1B0GU29 152 aa15.54■□□□□ 0.08
LTBR-209ENST00000541102 LOC730098B7Z3J9 87 aa15.54■□□□□ 0.08
LTBR-209ENST00000541102 H0YCG3 227 aa15.54■□□□□ 0.08
LTBR-209ENST00000541102 ABLIM1O14639 778 aa15.54■□□□□ 0.08
LTBR-209ENST00000541102 DCXO43602 365 aa15.54■□□□□ 0.08
LTBR-209ENST00000541102 TBCAO75347 108 aaKnown RBP15.54■□□□□ 0.08
LTBR-209ENST00000541102 TOM1L1O75674 476 aa15.54■□□□□ 0.08
LTBR-209ENST00000541102 KIF4AO95239 1232 aa15.54■□□□□ 0.08
LTBR-209ENST00000541102 ADH1AP07327 375 aa15.54■□□□□ 0.08
LTBR-209ENST00000541102 SPATA31D3P0C874 917 aa15.54■□□□□ 0.08
LTBR-209ENST00000541102 PROZP22891 400 aa15.54■□□□□ 0.08
LTBR-209ENST00000541102 NCKAP1LP55160 1127 aa15.54■□□□□ 0.08
LTBR-209ENST00000541102 FAM160A1Q05DH4 1040 aa15.54■□□□□ 0.08
LTBR-209ENST00000541102 ITIH3Q06033 890 aa15.54■□□□□ 0.08
LTBR-209ENST00000541102 TMEM31Q5JXX7 168 aa15.54■□□□□ 0.08
LTBR-209ENST00000541102 ATAT1Q5SQI0 421 aa15.54■□□□□ 0.08
LTBR-209ENST00000541102 FAM171A1Q5VUB5 890 aa15.54■□□□□ 0.08
LTBR-209ENST00000541102 TMC5Q6UXY8 1006 aa15.54■□□□□ 0.08
LTBR-209ENST00000541102 SPATA31D4Q6ZUB0 917 aa15.54■□□□□ 0.08
LTBR-209ENST00000541102 SFR1Q86XK3 245 aa15.54■□□□□ 0.08
LTBR-209ENST00000541102 PALB2Q86YC2 1186 aa15.54■□□□□ 0.08
LTBR-209ENST00000541102 GLIS3Q8NEA6 775 aa15.54■□□□□ 0.08
LTBR-209ENST00000541102 PPP1R10Q96QC0 940 aaKnown RBP15.54■□□□□ 0.08
LTBR-209ENST00000541102 C7orf25Q9BPX7 421 aa15.54■□□□□ 0.08
LTBR-209ENST00000541102 RXFP1Q9HBX9 757 aa15.54■□□□□ 0.08
LTBR-209ENST00000541102 TOPORSQ9NS56 1045 aaPredicted RBP15.54■□□□□ 0.08
LTBR-209ENST00000541102 TBC1D7Q9P0N9 293 aa15.54■□□□□ 0.08
LTBR-209ENST00000541102 MUTYHQ9UIF7 546 aa15.54■□□□□ 0.08
LTBR-209ENST00000541102 FRMD3A2A2Y4 597 aa15.53■□□□□ 0.08
LTBR-209ENST00000541102 K7ENM7 598 aa15.53■□□□□ 0.08
LTBR-209ENST00000541102 CLDN3O15551 220 aa15.53■□□□□ 0.08
LTBR-209ENST00000541102 TRAK2O60296 914 aa15.53■□□□□ 0.08
LTBR-209ENST00000541102 RPL17P18621 184 aaKnown RBP15.53■□□□□ 0.08
LTBR-209ENST00000541102 IGFBP6P24592 240 aaPredicted RBP15.53■□□□□ 0.08
LTBR-209ENST00000541102 NMT1P30419 496 aaKnown RBP15.53■□□□□ 0.08
LTBR-209ENST00000541102 MTHFRP42898 656 aa15.53■□□□□ 0.08
LTBR-209ENST00000541102 NOLC1Q14978 699 aaKnown RBP eCLIP15.53■□□□□ 0.08
LTBR-209ENST00000541102 DCLRE1AQ6PJP8 1040 aa15.53■□□□□ 0.08
LTBR-209ENST00000541102 PRSS55Q6UWB4 352 aaPredicted RBP15.53■□□□□ 0.08
LTBR-209ENST00000541102 ZPBP2Q6X784 338 aa15.53■□□□□ 0.08
LTBR-209ENST00000541102 CEP57L1Q8IYX8 460 aa15.53■□□□□ 0.08
LTBR-209ENST00000541102 FEZF2Q8TBJ5 459 aa15.53■□□□□ 0.08
LTBR-209ENST00000541102 ERCC4Q92889 916 aaPredicted RBP15.53■□□□□ 0.08
LTBR-209ENST00000541102 RIPOR3Q96MK2 946 aa15.53■□□□□ 0.08
LTBR-209ENST00000541102 IKZF4Q9H2S9 585 aa15.53■□□□□ 0.08
LTBR-209ENST00000541102 POMKQ9H5K3 350 aa15.53■□□□□ 0.08
LTBR-209ENST00000541102 GOLGA2P5Q9HBQ8 144 aa15.53■□□□□ 0.08
LTBR-209ENST00000541102 TBX20Q9UMR3 447 aa15.53■□□□□ 0.08
LTBR-209ENST00000541102 KLRC4O43908 158 aa15.52■□□□□ 0.08
LTBR-209ENST00000541102 B3GAT3O94766 335 aa15.52■□□□□ 0.08
LTBR-209ENST00000541102 GLUD1P00367 558 aa15.52■□□□□ 0.08
LTBR-209ENST00000541102 IDEP14735 1019 aa15.52■□□□□ 0.08
LTBR-209ENST00000541102 LIG4P49917 911 aa15.52■□□□□ 0.08
LTBR-209ENST00000541102 CLCNKBP51801 687 aa15.52■□□□□ 0.08
LTBR-209ENST00000541102 CASP5P51878 434 aa15.52■□□□□ 0.08
LTBR-209ENST00000541102 UBE2HP62256 183 aa15.52■□□□□ 0.08
LTBR-209ENST00000541102 ASIC1P78348 528 aa15.52■□□□□ 0.08
LTBR-209ENST00000541102 ZC2HC1CQ53FD0 456 aaPredicted RBP15.52■□□□□ 0.08
LTBR-209ENST00000541102 RTP2Q5QGT7 225 aa15.52■□□□□ 0.08
LTBR-209ENST00000541102 CNNM4Q6P4Q7 775 aa15.52■□□□□ 0.08
LTBR-209ENST00000541102 ALKAL1Q6UXT8 129 aa15.52■□□□□ 0.08
LTBR-209ENST00000541102 SNX27Q96L92 541 aa15.52■□□□□ 0.08
LTBR-209ENST00000541102 ZMAT2Q96NC0 199 aaKnown RBP15.52■□□□□ 0.08
LTBR-209ENST00000541102 NECTIN4Q96NY8 510 aa15.52■□□□□ 0.08
LTBR-209ENST00000541102 LRFN3Q9BTN0 628 aa15.52■□□□□ 0.08
LTBR-209ENST00000541102 TTPALQ9BTX7 342 aa15.52■□□□□ 0.08
LTBR-209ENST00000541102 MAN1C1Q9NR34 630 aa15.52■□□□□ 0.08
LTBR-209ENST00000541102 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.52■□□□□ 0.08
LTBR-209ENST00000541102 PANK4Q9NVE7 773 aa15.52■□□□□ 0.08
LTBR-209ENST00000541102 USP25Q9UHP3 1055 aa15.52■□□□□ 0.08
LTBR-209ENST00000541102 TRIP11Q15643 1979 aa15.52■□□□□ 0.07
LTBR-209ENST00000541102 MUC3AQ02505 3323 aa15.51■□□□□ 0.07
LTBR-209ENST00000541102 I3L4J1 428 aa15.51■□□□□ 0.07
LTBR-209ENST00000541102 HNRNPDLO14979 420 aaKnown RBP15.51■□□□□ 0.07
LTBR-209ENST00000541102 COL9A1P20849 921 aa15.51■□□□□ 0.07
LTBR-209ENST00000541102 SOX4Q06945 474 aaPredicted RBP15.51■□□□□ 0.07
LTBR-209ENST00000541102 MCL1Q07820 350 aa15.51■□□□□ 0.07
LTBR-209ENST00000541102 KCNA1Q09470 495 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms