RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 TMC6Q7Z403 805 aa11.52□□□□□ -0.57
ATL3-204ENST00000540699 SLC9A9Q8IVB4 645 aa11.52□□□□□ -0.57
ATL3-204ENST00000540699 C12orf56Q8IXR9 622 aa11.52□□□□□ -0.57
ATL3-204ENST00000540699 HACE1Q8IYU2 909 aa11.52□□□□□ -0.57
ATL3-204ENST00000540699 GOLGA5Q8TBA6 731 aa11.52□□□□□ -0.57
ATL3-204ENST00000540699 LPPQ93052 612 aa11.52□□□□□ -0.57
ATL3-204ENST00000540699 FAM122AQ96E09 287 aa11.52□□□□□ -0.57
ATL3-204ENST00000540699 ZBTB45Q96K62 511 aaPredicted RBP11.52□□□□□ -0.57
ATL3-204ENST00000540699 ACCSQ96QU6 501 aa11.52□□□□□ -0.57
ATL3-204ENST00000540699 TUBGCP2Q9BSJ2 902 aa11.52□□□□□ -0.57
ATL3-204ENST00000540699 TRIM6Q9C030 488 aaPredicted RBP11.52□□□□□ -0.57
ATL3-204ENST00000540699 GBP3Q9H0R5 595 aa11.52□□□□□ -0.57
ATL3-204ENST00000540699 RNF39Q9H2S5 420 aa11.52□□□□□ -0.57
ATL3-204ENST00000540699 TMEM206Q9H813 350 aa11.52□□□□□ -0.57
ATL3-204ENST00000540699 AGPAT3Q9NRZ7 376 aa11.52□□□□□ -0.57
ATL3-204ENST00000540699 EXOC7Q9UPT5 735 aa11.52□□□□□ -0.57
ATL3-204ENST00000540699 GIT1Q9Y2X7 761 aa11.52□□□□□ -0.57
ATL3-204ENST00000540699 HES2Q9Y543 173 aa11.52□□□□□ -0.57
ATL3-204ENST00000540699 PLXNA4Q9HCM2 1894 aa11.52□□□□□ -0.57
ATL3-204ENST00000540699 ITIH6Q6UXX5 1313 aa11.52□□□□□ -0.57
ATL3-204ENST00000540699 A0A0B4J269 797 aa11.51□□□□□ -0.57
ATL3-204ENST00000540699 ANKRD63C9JTQ0 380 aa11.51□□□□□ -0.57
ATL3-204ENST00000540699 HNRNPDLO14979 420 aaKnown RBP11.51□□□□□ -0.57
ATL3-204ENST00000540699 CETN3O15182 167 aa11.51□□□□□ -0.57
ATL3-204ENST00000540699 SLC16A3O15427 465 aaKnown RBP11.51□□□□□ -0.57
ATL3-204ENST00000540699 CLDN3O15551 220 aa11.51□□□□□ -0.57
ATL3-204ENST00000540699 PTMAP06454 111 aaKnown RBP11.51□□□□□ -0.57
ATL3-204ENST00000540699 ITGA4P13612 1032 aa11.51□□□□□ -0.57
ATL3-204ENST00000540699 MTIF2P46199 727 aaKnown RBP11.51□□□□□ -0.57
ATL3-204ENST00000540699 LIG4P49917 911 aa11.51□□□□□ -0.57
ATL3-204ENST00000540699 ERVK-21P61565 698 aa11.51□□□□□ -0.57
ATL3-204ENST00000540699 SNRPFP62306 86 aaKnown RBP11.51□□□□□ -0.57
ATL3-204ENST00000540699 ADAM9Q13443 819 aa11.51□□□□□ -0.57
ATL3-204ENST00000540699 BTG3Q14201 252 aaPredicted RBP11.51□□□□□ -0.57
ATL3-204ENST00000540699 NOLC1Q14978 699 aaKnown RBP eCLIP11.51□□□□□ -0.57
ATL3-204ENST00000540699 MAN2A1Q16706 1144 aa11.51□□□□□ -0.57
ATL3-204ENST00000540699 PTPN21Q16825 1174 aa11.51□□□□□ -0.57
ATL3-204ENST00000540699 TMEM132AQ24JP5 1023 aa11.51□□□□□ -0.57
ATL3-204ENST00000540699 XKR4Q5GH76 650 aa11.51□□□□□ -0.57
ATL3-204ENST00000540699 GLB1LQ6UWU2 654 aa11.51□□□□□ -0.57
ATL3-204ENST00000540699 CCDC186Q7Z3E2 898 aa11.51□□□□□ -0.57
ATL3-204ENST00000540699 TRIM59Q8IWR1 403 aa11.51□□□□□ -0.57
ATL3-204ENST00000540699 DRC7Q8IY82 874 aa11.51□□□□□ -0.57
ATL3-204ENST00000540699 RNF169Q8NCN4 708 aa11.51□□□□□ -0.57
ATL3-204ENST00000540699 GSTCDQ8NEC7 633 aa11.51□□□□□ -0.57
ATL3-204ENST00000540699 TRIM44Q96DX7 344 aaPredicted RBP11.51□□□□□ -0.57
ATL3-204ENST00000540699 SAMD11Q96NU1 681 aa11.51□□□□□ -0.57
ATL3-204ENST00000540699 UHRF1Q96T88 793 aaPredicted RBP11.51□□□□□ -0.57
ATL3-204ENST00000540699 VPS16Q9H269 839 aa11.51□□□□□ -0.57
ATL3-204ENST00000540699 KCNF1Q9H3M0 494 aa11.51□□□□□ -0.57
ATL3-204ENST00000540699 RSAD1Q9HA92 442 aa11.51□□□□□ -0.57
ATL3-204ENST00000540699 CGNQ9P2M7 1197 aaKnown RBP11.51□□□□□ -0.57
ATL3-204ENST00000540699 A0A1W2PQC6 194 aa11.5□□□□□ -0.57
ATL3-204ENST00000540699 ARL5CA6NH57 179 aa11.5□□□□□ -0.57
ATL3-204ENST00000540699 EPOPA6NHQ4 379 aa11.5□□□□□ -0.57
ATL3-204ENST00000540699 TBKBP1A7MCY6 615 aa11.5□□□□□ -0.57
ATL3-204ENST00000540699 CLIC2O15247 247 aa11.5□□□□□ -0.57
ATL3-204ENST00000540699 AKAP3O75969 853 aa11.5□□□□□ -0.57
ATL3-204ENST00000540699 RECQL4O94761 1208 aa11.5□□□□□ -0.57
ATL3-204ENST00000540699 RPL13P26373 211 aaKnown RBP11.5□□□□□ -0.57
ATL3-204ENST00000540699 ADSSP30520 456 aa11.5□□□□□ -0.57
ATL3-204ENST00000540699 POU5F1Q01860 360 aaKnown RBP11.5□□□□□ -0.57
ATL3-204ENST00000540699 KYAT1Q16773 422 aa11.5□□□□□ -0.57
ATL3-204ENST00000540699 NOMO2Q5JPE7 1267 aa11.5□□□□□ -0.57
ATL3-204ENST00000540699 SPECC1LQ69YQ0 1117 aa11.5□□□□□ -0.57
ATL3-204ENST00000540699 SLFN12LQ6IEE8 588 aa11.5□□□□□ -0.57
ATL3-204ENST00000540699 ALKAL1Q6UXT8 129 aa11.5□□□□□ -0.57
ATL3-204ENST00000540699 HS2ST1Q7LGA3 356 aa11.5□□□□□ -0.57
ATL3-204ENST00000540699 FRMD5Q7Z6J6 570 aa11.5□□□□□ -0.57
ATL3-204ENST00000540699 ABI1Q8IZP0 508 aa11.5□□□□□ -0.57
ATL3-204ENST00000540699 LRRC43Q8N309 656 aa11.5□□□□□ -0.57
ATL3-204ENST00000540699 MICALL1Q8N3F8 863 aa11.5□□□□□ -0.57
ATL3-204ENST00000540699 FIBCD1Q8N539 461 aa11.5□□□□□ -0.57
ATL3-204ENST00000540699 CEP120Q8N960 986 aa11.5□□□□□ -0.57
ATL3-204ENST00000540699 HELQQ8TDG4 1101 aa11.5□□□□□ -0.57
ATL3-204ENST00000540699 BICD1Q96G01 975 aa11.5□□□□□ -0.57
ATL3-204ENST00000540699 BORCS6Q96GS4 357 aa11.5□□□□□ -0.57
ATL3-204ENST00000540699 TCHPQ9BT92 498 aa11.5□□□□□ -0.57
ATL3-204ENST00000540699 MKNK1Q9BUB5 465 aa11.5□□□□□ -0.57
ATL3-204ENST00000540699 MRPL9Q9BYD2 267 aaKnown RBP11.5□□□□□ -0.57
ATL3-204ENST00000540699 CWH43Q9H720 699 aa11.5□□□□□ -0.57
ATL3-204ENST00000540699 SNTG2Q9NY99 539 aa11.5□□□□□ -0.57
ATL3-204ENST00000540699 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.5□□□□□ -0.57
ATL3-204ENST00000540699 ANKFY1Q9P2R3 1169 aa11.5□□□□□ -0.57
ATL3-204ENST00000540699 MRPL42Q9Y6G3 142 aaKnown RBP11.5□□□□□ -0.57
ATL3-204ENST00000540699 MYO7AQ13402 2215 aa11.5□□□□□ -0.57
ATL3-204ENST00000540699 TISP43B9A030 160 aa11.49□□□□□ -0.57
ATL3-204ENST00000540699 C5orf67F2Z3F1 127 aa11.49□□□□□ -0.57
ATL3-204ENST00000540699 RFXAPO00287 272 aa11.49□□□□□ -0.57
ATL3-204ENST00000540699 OGTO15294 1046 aa11.49□□□□□ -0.57
ATL3-204ENST00000540699 MEFVO15553 781 aaPredicted RBP11.49□□□□□ -0.57
ATL3-204ENST00000540699 ADRB2P07550 413 aa11.49□□□□□ -0.57
ATL3-204ENST00000540699 PRKCSHP14314 528 aaPredicted RBP11.49□□□□□ -0.57
ATL3-204ENST00000540699 POU3F3P20264 500 aaPredicted RBP11.49□□□□□ -0.57
ATL3-204ENST00000540699 GARTP22102 1010 aa11.49□□□□□ -0.57
ATL3-204ENST00000540699 AKAP5P24588 427 aa11.49□□□□□ -0.57
ATL3-204ENST00000540699 CASP4P49662 377 aa11.49□□□□□ -0.57
ATL3-204ENST00000540699 AFF1P51825 1210 aaKnown RBP11.49□□□□□ -0.57
ATL3-204ENST00000540699 GSDMDP57764 484 aa11.49□□□□□ -0.57
ATL3-204ENST00000540699 MCCD1P59942 119 aaPredicted RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms