RNA–Protein interactions for RNA: ENST00000532313.5

CSRP1-215, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 5,239 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-215ENST00000532313 CYP3A43Q9HB55 503 aa12.37□□□□□ -0.43
CSRP1-215ENST00000532313 SF3B1O75533 1304 aaKnown RBP eCLIP12.37□□□□□ -0.43
CSRP1-215ENST00000532313 ACKR2O00590 384 aa12.37□□□□□ -0.43
CSRP1-215ENST00000532313 ZNF197O14709 1029 aa12.37□□□□□ -0.43
CSRP1-215ENST00000532313 CCL23P55773 120 aa12.37□□□□□ -0.43
CSRP1-215ENST00000532313 ZNF235Q14590 738 aa12.37□□□□□ -0.43
CSRP1-215ENST00000532313 GRAMD1CQ8IYS0 662 aa12.37□□□□□ -0.43
CSRP1-215ENST00000532313 DNAAF3Q8N9W5 541 aa12.37□□□□□ -0.43
CSRP1-215ENST00000532313 EPN1Q9Y6I3 576 aaPredicted RBP12.37□□□□□ -0.43
CSRP1-215ENST00000532313 PASKQ96RG2 1323 aa12.37□□□□□ -0.43
CSRP1-215ENST00000532313 LRRD1A4D1F6 860 aa12.36□□□□□ -0.43
CSRP1-215ENST00000532313 THOC5Q13769 683 aaKnown RBP12.36□□□□□ -0.43
CSRP1-215ENST00000532313 MAP7D1Q3KQU3 841 aa12.36□□□□□ -0.43
CSRP1-215ENST00000532313 ZNF771Q7L3S4 317 aaPredicted RBP12.36□□□□□ -0.43
CSRP1-215ENST00000532313 LRP10Q7Z4F1 713 aa12.36□□□□□ -0.43
CSRP1-215ENST00000532313 GLYCTKQ8IVS8 523 aa12.36□□□□□ -0.43
CSRP1-215ENST00000532313 HHIPL1Q96JK4 782 aa12.36□□□□□ -0.43
CSRP1-215ENST00000532313 HINFPQ9BQA5 517 aa12.36□□□□□ -0.43
CSRP1-215ENST00000532313 FBXO2Q9UK22 296 aaPredicted RBP12.36□□□□□ -0.43
CSRP1-215ENST00000532313 SPATA31C2B4DYI2 1134 aa12.36□□□□□ -0.43
CSRP1-215ENST00000532313 AP3B1O00203 1094 aa12.36□□□□□ -0.43
CSRP1-215ENST00000532313 ZW10O43264 779 aa12.36□□□□□ -0.43
CSRP1-215ENST00000532313 FBXO21O94952 628 aa12.36□□□□□ -0.43
CSRP1-215ENST00000532313 NDUFV1P49821 464 aa12.36□□□□□ -0.43
CSRP1-215ENST00000532313 ANO4Q32M45 955 aa12.36□□□□□ -0.43
CSRP1-215ENST00000532313 MICALCLQ6ZW33 695 aa12.36□□□□□ -0.43
CSRP1-215ENST00000532313 FAM133AQ8N9E0 248 aa12.36□□□□□ -0.43
CSRP1-215ENST00000532313 USP13Q92995 863 aaPredicted RBP12.36□□□□□ -0.43
CSRP1-215ENST00000532313 FBXO44Q9H4M3 255 aa12.36□□□□□ -0.43
CSRP1-215ENST00000532313 DDX56Q9NY93 547 aaKnown RBP12.36□□□□□ -0.43
CSRP1-215ENST00000532313 SMIM35A0A1B0GVV1 85 aa12.36□□□□□ -0.43
CSRP1-215ENST00000532313 CYB561D2O14569 222 aa12.36□□□□□ -0.43
CSRP1-215ENST00000532313 MAP3K13O43283 966 aa12.36□□□□□ -0.43
CSRP1-215ENST00000532313 DTNBO60941 627 aa12.36□□□□□ -0.43
CSRP1-215ENST00000532313 ZBED1O96006 694 aa12.36□□□□□ -0.43
CSRP1-215ENST00000532313 KCNA4P22459 653 aa12.36□□□□□ -0.43
CSRP1-215ENST00000532313 EIF4BP23588 611 aaKnown RBP12.36□□□□□ -0.43
CSRP1-215ENST00000532313 HERC6Q8IVU3 1022 aa12.36□□□□□ -0.43
CSRP1-215ENST00000532313 SMYD4Q8IYR2 804 aaPredicted RBP12.36□□□□□ -0.43
CSRP1-215ENST00000532313 IFT81Q8WYA0 676 aa12.36□□□□□ -0.43
CSRP1-215ENST00000532313 IL17RAQ96F46 866 aa12.36□□□□□ -0.43
CSRP1-215ENST00000532313 PLEKHA5Q9HAU0 1116 aa12.36□□□□□ -0.43
CSRP1-215ENST00000532313 ADCY8P40145 1251 aa12.36□□□□□ -0.43
CSRP1-215ENST00000532313 MAP7Q14244 749 aa12.36□□□□□ -0.43
CSRP1-215ENST00000532313 DARS2Q6PI48 645 aaKnown RBP12.36□□□□□ -0.43
CSRP1-215ENST00000532313 SAPCD2Q86UD0 394 aa12.36□□□□□ -0.43
CSRP1-215ENST00000532313 KCNB2Q92953 911 aa12.36□□□□□ -0.43
CSRP1-215ENST00000532313 MMTAG2Q9BU76 263 aaKnown RBP12.36□□□□□ -0.43
CSRP1-215ENST00000532313 NCAM2O15394 837 aa12.35□□□□□ -0.43
CSRP1-215ENST00000532313 RTN3O95197 1032 aaPredicted RBP12.35□□□□□ -0.43
CSRP1-215ENST00000532313 PTGER2P43116 358 aa12.35□□□□□ -0.43
CSRP1-215ENST00000532313 RABGAP1LQ5R372 815 aa12.35□□□□□ -0.43
CSRP1-215ENST00000532313 PRAMEF19Q5SWL8 479 aa12.35□□□□□ -0.43
CSRP1-215ENST00000532313 TMEM86AQ8N2M4 240 aa12.35□□□□□ -0.43
CSRP1-215ENST00000532313 TSC1Q92574 1164 aa12.35□□□□□ -0.43
CSRP1-215ENST00000532313 CYP4F11Q9HBI6 524 aa12.35□□□□□ -0.43
CSRP1-215ENST00000532313 JRKLQ9Y4A0 524 aa12.35□□□□□ -0.43
CSRP1-215ENST00000532313 UBIAD1Q9Y5Z9 338 aa12.35□□□□□ -0.43
CSRP1-215ENST00000532313 MIF4GDA9UHW6 222 aaKnown RBP12.35□□□□□ -0.43
CSRP1-215ENST00000532313 MOCS2O96007 188 aaPredicted RBP12.35□□□□□ -0.43
CSRP1-215ENST00000532313 LBX1P52954 281 aa12.35□□□□□ -0.43
CSRP1-215ENST00000532313 GRIK5Q16478 980 aa12.35□□□□□ -0.43
CSRP1-215ENST00000532313 C10orf120Q5SQS8 335 aa12.35□□□□□ -0.43
CSRP1-215ENST00000532313 FAM102AQ5T9C2 384 aaPredicted RBP12.35□□□□□ -0.43
CSRP1-215ENST00000532313 DDX42Q86XP3 938 aaKnown RBP eCLIP12.35□□□□□ -0.43
CSRP1-215ENST00000532313 ZNF677Q86XU0 584 aa12.35□□□□□ -0.43
CSRP1-215ENST00000532313 C18orf8Q96DM3 657 aa12.35□□□□□ -0.43
CSRP1-215ENST00000532313 OLA1Q9NTK5 396 aaKnown RBP12.35□□□□□ -0.43
CSRP1-215ENST00000532313 RGPD8O14715 1765 aaPredicted RBP12.35□□□□□ -0.43
CSRP1-215ENST00000532313 KCNK3O14649 394 aa12.35□□□□□ -0.43
CSRP1-215ENST00000532313 ATF2P15336 505 aa12.35□□□□□ -0.43
CSRP1-215ENST00000532313 GTF2H3Q13889 308 aa12.35□□□□□ -0.43
CSRP1-215ENST00000532313 KCNA10Q16322 511 aa12.35□□□□□ -0.43
CSRP1-215ENST00000532313 OVOS1Q6IE37 1185 aa12.35□□□□□ -0.43
CSRP1-215ENST00000532313 FBXO32Q969P5 355 aa12.35□□□□□ -0.43
CSRP1-215ENST00000532313 XPO6Q96QU8 1125 aaKnown RBP12.35□□□□□ -0.43
CSRP1-215ENST00000532313 IGFLR1Q9H665 355 aa12.35□□□□□ -0.43
CSRP1-215ENST00000532313 CATSPERBQ9H7T0 1116 aa12.35□□□□□ -0.43
CSRP1-215ENST00000532313 GJB4Q9NTQ9 266 aa12.35□□□□□ -0.43
CSRP1-215ENST00000532313 NAGPAQ9UK23 515 aa12.35□□□□□ -0.43
CSRP1-215ENST00000532313 PP2D1A8MPX8 630 aa12.35□□□□□ -0.43
CSRP1-215ENST00000532313 TJP3O95049 919 aa12.35□□□□□ -0.43
CSRP1-215ENST00000532313 CLTBP09497 229 aa12.35□□□□□ -0.43
CSRP1-215ENST00000532313 MBL2P11226 248 aaPredicted RBP12.35□□□□□ -0.43
CSRP1-215ENST00000532313 NOMO2Q5JPE7 1267 aa12.35□□□□□ -0.43
CSRP1-215ENST00000532313 LRRC8DQ7L1W4 858 aa12.35□□□□□ -0.43
CSRP1-215ENST00000532313 RAB44Q7Z6P3 723 aaPredicted RBP12.35□□□□□ -0.43
CSRP1-215ENST00000532313 PARVAQ9NVD7 372 aa12.35□□□□□ -0.43
CSRP1-215ENST00000532313 ROBO3Q96MS0 1386 aa12.35□□□□□ -0.43
CSRP1-215ENST00000532313 ASGR1P07306 291 aa12.34□□□□□ -0.43
CSRP1-215ENST00000532313 ASPHQ12797 758 aa12.34□□□□□ -0.43
CSRP1-215ENST00000532313 SMARCB1Q12824 385 aa12.34□□□□□ -0.43
CSRP1-215ENST00000532313 PTK7Q13308 1070 aa12.34□□□□□ -0.43
CSRP1-215ENST00000532313 CDO1Q16878 200 aa12.34□□□□□ -0.43
CSRP1-215ENST00000532313 KAZNQ674X7 775 aa12.34□□□□□ -0.43
CSRP1-215ENST00000532313 ANKS3Q6ZW76 656 aa12.34□□□□□ -0.43
CSRP1-215ENST00000532313 WDR49Q8IV35 697 aa12.34□□□□□ -0.43
CSRP1-215ENST00000532313 TSSK1BQ9BXA7 367 aa12.34□□□□□ -0.43
CSRP1-215ENST00000532313 DCLK3Q9C098 648 aa12.34□□□□□ -0.43
CSRP1-215ENST00000532313 CNOT8Q9UFF9 292 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms