RNA–Protein interactions for RNA: ENST00000531546.1

CASP4-210, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 921 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-210ENST00000531546 ADGRB1O14514 1584 aa6.59□□□□□ -1.35
CASP4-210ENST00000531546 MKI67P46013 3256 aaKnown RBP6.59□□□□□ -1.35
CASP4-210ENST00000531546 TOGARAM1Q9Y4F4 1720 aa6.59□□□□□ -1.36
CASP4-210ENST00000531546 NSD2O96028 1365 aa6.58□□□□□ -1.36
CASP4-210ENST00000531546 ANTXR2P58335 489 aa6.58□□□□□ -1.36
CASP4-210ENST00000531546 SLFN12LQ6IEE8 588 aa6.58□□□□□ -1.36
CASP4-210ENST00000531546 BMP8AQ7Z5Y6 402 aa6.58□□□□□ -1.36
CASP4-210ENST00000531546 ARHGEF25Q86VW2 580 aa6.58□□□□□ -1.36
CASP4-210ENST00000531546 CMTM4Q8IZR5 234 aa6.58□□□□□ -1.36
CASP4-210ENST00000531546 SLC17A8Q8NDX2 589 aa6.58□□□□□ -1.36
CASP4-210ENST00000531546 GSTCDQ8NEC7 633 aa6.58□□□□□ -1.36
CASP4-210ENST00000531546 CPT1CQ8TCG5 803 aa6.58□□□□□ -1.36
CASP4-210ENST00000531546 ARMC5Q96C12 935 aa6.58□□□□□ -1.36
CASP4-210ENST00000531546 MAML3Q96JK9 1138 aa6.58□□□□□ -1.36
CASP4-210ENST00000531546 C16orf92Q96LL3 132 aa6.58□□□□□ -1.36
CASP4-210ENST00000531546 MAGEB10Q96LZ2 347 aaPredicted RBP6.58□□□□□ -1.36
CASP4-210ENST00000531546 NCDNQ9UBB6 729 aa6.58□□□□□ -1.36
CASP4-210ENST00000531546 PALLDQ8WX93 1383 aa6.57□□□□□ -1.36
CASP4-210ENST00000531546 SZT2Q5T011 3432 aa6.57□□□□□ -1.36
CASP4-210ENST00000531546 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.57□□□□□ -1.36
CASP4-210ENST00000531546 UBA6A0AVT1 1052 aaPredicted RBP6.57□□□□□ -1.36
CASP4-210ENST00000531546 DIAPH1O60610 1272 aaKnown RBP6.57□□□□□ -1.36
CASP4-210ENST00000531546 LAG3P18627 525 aa6.57□□□□□ -1.36
CASP4-210ENST00000531546 SERINC3Q13530 473 aa6.57□□□□□ -1.36
CASP4-210ENST00000531546 OLFML1Q6UWY5 402 aa6.57□□□□□ -1.36
CASP4-210ENST00000531546 KCNH5Q8NCM2 988 aa6.57□□□□□ -1.36
CASP4-210ENST00000531546 CUL9Q8IWT3 2517 aa6.56□□□□□ -1.36
CASP4-210ENST00000531546 MTSS1O43312 755 aa6.56□□□□□ -1.36
CASP4-210ENST00000531546 CDK4P11802 303 aa6.56□□□□□ -1.36
CASP4-210ENST00000531546 HMGB2P26583 209 aaKnown RBP6.56□□□□□ -1.36
CASP4-210ENST00000531546 TMEM177Q53S58 311 aa6.56□□□□□ -1.36
CASP4-210ENST00000531546 BEND2Q8NDZ0 799 aa6.56□□□□□ -1.36
CASP4-210ENST00000531546 RPGRQ92834 1020 aaKnown RBP6.56□□□□□ -1.36
CASP4-210ENST00000531546 LTV1Q96GA3 475 aaPredicted RBP6.56□□□□□ -1.36
CASP4-210ENST00000531546 SIN3AQ96ST3 1273 aa6.56□□□□□ -1.36
CASP4-210ENST00000531546 SFMBT1Q9UHJ3 866 aa6.56□□□□□ -1.36
CASP4-210ENST00000531546 CENPJQ9HC77 1338 aaPredicted RBP6.55□□□□□ -1.36
CASP4-210ENST00000531546 SCAF4O95104 1147 aaKnown RBP6.55□□□□□ -1.36
CASP4-210ENST00000531546 FAM153BP0C7A2 387 aa6.55□□□□□ -1.36
CASP4-210ENST00000531546 CHRNA5P30532 468 aa6.55□□□□□ -1.36
CASP4-210ENST00000531546 GTF2F1P35269 517 aaKnown RBP eCLIP6.55□□□□□ -1.36
CASP4-210ENST00000531546 KIR2DL3P43628 341 aa6.55□□□□□ -1.36
CASP4-210ENST00000531546 USP14P54578 494 aa6.55□□□□□ -1.36
CASP4-210ENST00000531546 KRTAP10-11P60412 298 aa6.55□□□□□ -1.36
CASP4-210ENST00000531546 RBL2Q08999 1139 aa6.55□□□□□ -1.36
CASP4-210ENST00000531546 TRIM61Q5EBN2 209 aa6.55□□□□□ -1.36
CASP4-210ENST00000531546 TTC38Q5R3I4 469 aa6.55□□□□□ -1.36
CASP4-210ENST00000531546 OTOP1Q7RTM1 612 aa6.55□□□□□ -1.36
CASP4-210ENST00000531546 LRP10Q7Z4F1 713 aa6.55□□□□□ -1.36
CASP4-210ENST00000531546 CAPNS2Q96L46 248 aa6.55□□□□□ -1.36
CASP4-210ENST00000531546 HAPLN2Q9GZV7 340 aa6.55□□□□□ -1.36
CASP4-210ENST00000531546 DNAI1Q9UI46 699 aa6.55□□□□□ -1.36
CASP4-210ENST00000531546 SYNPO2Q9UMS6 1093 aa6.55□□□□□ -1.36
CASP4-210ENST00000531546 COL6A3P12111 3177 aa6.55□□□□□ -1.36
CASP4-210ENST00000531546 C4AP0C0L4 1744 aa6.55□□□□□ -1.36
CASP4-210ENST00000531546 COL4A3Q01955 1670 aa6.55□□□□□ -1.36
CASP4-210ENST00000531546 LTN1O94822 1766 aa6.54□□□□□ -1.36
CASP4-210ENST00000531546 MAFGO15525 162 aa6.54□□□□□ -1.36
CASP4-210ENST00000531546 ZBTB48P10074 688 aaPredicted RBP6.54□□□□□ -1.36
CASP4-210ENST00000531546 ZNF37AP17032 561 aaPredicted RBP6.54□□□□□ -1.36
CASP4-210ENST00000531546 HK1P19367 917 aa6.54□□□□□ -1.36
CASP4-210ENST00000531546 BCAR1P56945 870 aa6.54□□□□□ -1.36
CASP4-210ENST00000531546 TMF1P82094 1093 aa6.54□□□□□ -1.36
CASP4-210ENST00000531546 RASA3Q14644 834 aa6.54□□□□□ -1.36
CASP4-210ENST00000531546 ARHGAP44Q17R89 818 aa6.54□□□□□ -1.36
CASP4-210ENST00000531546 COLEC12Q5KU26 742 aa6.54□□□□□ -1.36
CASP4-210ENST00000531546 PRAMEF9Q5VWM5 478 aa6.54□□□□□ -1.36
CASP4-210ENST00000531546 SUPT20HQ8NEM7 779 aa6.54□□□□□ -1.36
CASP4-210ENST00000531546 SLC7A14Q8TBB6 771 aa6.54□□□□□ -1.36
CASP4-210ENST00000531546 GPR101Q96P66 508 aaPredicted RBP6.54□□□□□ -1.36
CASP4-210ENST00000531546 SLC46A2Q9BY10 475 aa6.54□□□□□ -1.36
CASP4-210ENST00000531546 SYNPO2LQ9H987 977 aa6.54□□□□□ -1.36
CASP4-210ENST00000531546 COX11Q9Y6N1 276 aa6.54□□□□□ -1.36
CASP4-210ENST00000531546 LTBP1Q14766 1721 aa6.53□□□□□ -1.36
CASP4-210ENST00000531546 PASKQ96RG2 1323 aa6.53□□□□□ -1.36
CASP4-210ENST00000531546 NRP1O14786 923 aa6.53□□□□□ -1.36
CASP4-210ENST00000531546 KIAA0355O15063 1070 aa6.53□□□□□ -1.36
CASP4-210ENST00000531546 KCNA3P22001 575 aa6.53□□□□□ -1.36
CASP4-210ENST00000531546 AVPR1BP47901 424 aa6.53□□□□□ -1.36
CASP4-210ENST00000531546 KIF11P52732 1056 aa6.53□□□□□ -1.36
CASP4-210ENST00000531546 METTL24Q5JXM2 366 aa6.53□□□□□ -1.36
CASP4-210ENST00000531546 IQSEC1Q6DN90 963 aa6.53□□□□□ -1.36
CASP4-210ENST00000531546 Q6YL49 198 aa6.53□□□□□ -1.36
CASP4-210ENST00000531546 RD3Q7Z3Z2 195 aa6.53□□□□□ -1.36
CASP4-210ENST00000531546 CXorf67Q86X51 503 aaPredicted RBP6.53□□□□□ -1.36
CASP4-210ENST00000531546 MYEOVQ96EZ4 313 aa6.53□□□□□ -1.36
CASP4-210ENST00000531546 ACSS2Q9NR19 701 aa6.53□□□□□ -1.36
CASP4-210ENST00000531546 EIF2B4Q9UI10 523 aaKnown RBP6.53□□□□□ -1.36
CASP4-210ENST00000531546 EVC2Q86UK5 1308 aa6.52□□□□□ -1.37
CASP4-210ENST00000531546 NFAT5O94916 1531 aa6.52□□□□□ -1.37
CASP4-210ENST00000531546 INO80B-WBP1J3KQ70 363 aa6.52□□□□□ -1.37
CASP4-210ENST00000531546 KRT37O76014 449 aa6.52□□□□□ -1.37
CASP4-210ENST00000531546 DDNO94850 711 aaPredicted RBP6.52□□□□□ -1.37
CASP4-210ENST00000531546 FXR1P51114 621 aaKnown RBP eCLIP6.52□□□□□ -1.37
CASP4-210ENST00000531546 NME9Q86XW9 330 aa6.52□□□□□ -1.37
CASP4-210ENST00000531546 IGSF22Q8N9C0 903 aa6.52□□□□□ -1.37
CASP4-210ENST00000531546 ZCRB1Q8TBF4 217 aaKnown RBP6.52□□□□□ -1.37
CASP4-210ENST00000531546 DEPDC7Q96QD5 511 aa6.52□□□□□ -1.37
CASP4-210ENST00000531546 TUBGCP5Q96RT8 1024 aa6.52□□□□□ -1.37
CASP4-210ENST00000531546 PDCD2LQ9BRP1 358 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms