RNA–Protein interactions for RNA: ENST00000531546.1

CASP4-210, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 921 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-210ENST00000531546 AEBP2Q6ZN18 517 aaPredicted RBP34.14■■■■□ 3.06
CASP4-210ENST00000531546 CHIC1Q5VXU3 224 aa32.42■■■□□ 2.78
CASP4-210ENST00000531546 SENP3Q9H4L4 574 aaPredicted RBP29.28■■■□□ 2.28
CASP4-210ENST00000531546 PHF23Q9BUL5 403 aaPredicted RBP28.8■■■□□ 2.2
CASP4-210ENST00000531546 FOXD1Q16676 465 aa27.2■■□□□ 1.94
CASP4-210ENST00000531546 PLPPR3Q6T4P5 718 aa25.93■■□□□ 1.74
CASP4-210ENST00000531546 MSH5O43196 834 aa25.62■■□□□ 1.69
CASP4-210ENST00000531546 PIAS4Q8N2W9 510 aaPredicted RBP25.47■■□□□ 1.67
CASP4-210ENST00000531546 PPP6R1Q9UPN7 881 aa25.3■■□□□ 1.64
CASP4-210ENST00000531546 ADRA2BP18089 450 aa25.24■■□□□ 1.63
CASP4-210ENST00000531546 POTEDQ86YR6 584 aa25.04■■□□□ 1.6
CASP4-210ENST00000531546 SCAF1Q9H7N4 1312 aaKnown RBP23.26■■□□□ 1.31
CASP4-210ENST00000531546 MAPK8IP2Q13387 824 aaPredicted RBP23.18■■□□□ 1.3
CASP4-210ENST00000531546 DMRT2Q9Y5R5 561 aa23.17■■□□□ 1.3
CASP4-210ENST00000531546 PPP4R3CPQ6ZMV5 832 aa22.66■■□□□ 1.22
CASP4-210ENST00000531546 CNKSR2Q8WXI2 1034 aa22.3■■□□□ 1.16
CASP4-210ENST00000531546 HOXD11P31277 338 aaPredicted RBP22.28■■□□□ 1.16
CASP4-210ENST00000531546 DCAF8L1A6NGE4 600 aa22.23■■□□□ 1.15
CASP4-210ENST00000531546 RNF216Q9NWF9 866 aaPredicted RBP22.12■■□□□ 1.13
CASP4-210ENST00000531546 CACNB1Q02641 598 aaPredicted RBP21.98■■□□□ 1.11
CASP4-210ENST00000531546 NCBP3Q53F19 620 aaKnown RBP21.85■■□□□ 1.09
CASP4-210ENST00000531546 RNF39Q9H2S5 420 aa21.78■■□□□ 1.08
CASP4-210ENST00000531546 DNAJC5BQ9UF47 199 aa21.6■■□□□ 1.05
CASP4-210ENST00000531546 C1QBPQ07021 282 aaKnown RBP21.51■■□□□ 1.03
CASP4-210ENST00000531546 NPM3O75607 178 aaKnown RBP21.44■■□□□ 1.02
CASP4-210ENST00000531546 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.25■□□□□ 0.99
CASP4-210ENST00000531546 KCNA4P22459 653 aa20.92■□□□□ 0.94
CASP4-210ENST00000531546 U3KPZ7 1027 aaPredicted RBP20.75■□□□□ 0.91
CASP4-210ENST00000531546 CAPN15O75808 1086 aa20.49■□□□□ 0.87
CASP4-210ENST00000531546 SLC4A2P04920 1241 aa20.45■□□□□ 0.86
CASP4-210ENST00000531546 SPINK5Q9NQ38 1064 aaPredicted RBP20.44■□□□□ 0.86
CASP4-210ENST00000531546 DSG3P32926 999 aa20.35■□□□□ 0.85
CASP4-210ENST00000531546 APLP2Q06481 763 aa20.35■□□□□ 0.85
CASP4-210ENST00000531546 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.27■□□□□ 0.84
CASP4-210ENST00000531546 HNRNPUL2Q1KMD3 747 aaKnown RBP20.27■□□□□ 0.84
CASP4-210ENST00000531546 ZNF219Q9P2Y4 722 aaPredicted RBP20.16■□□□□ 0.82
CASP4-210ENST00000531546 TRHP20396 242 aaPredicted RBP20.12■□□□□ 0.81
CASP4-210ENST00000531546 SAMD1Q6SPF0 538 aaPredicted RBP20.11■□□□□ 0.81
CASP4-210ENST00000531546 ABCB7O75027 752 aa19.96■□□□□ 0.79
CASP4-210ENST00000531546 MYCNP04198 464 aaPredicted RBP19.91■□□□□ 0.78
CASP4-210ENST00000531546 SLC4A1APQ9BWU0 796 aaKnown RBP19.79■□□□□ 0.76
CASP4-210ENST00000531546 POTEHQ6S545 545 aa19.64■□□□□ 0.73
CASP4-210ENST00000531546 FOXD4L1Q9NU39 408 aa19.63■□□□□ 0.73
CASP4-210ENST00000531546 POLA2Q14181 598 aa19.54■□□□□ 0.72
CASP4-210ENST00000531546 RBM42Q9BTD8 480 aaKnown RBP19.54■□□□□ 0.72
CASP4-210ENST00000531546 ATF5Q9Y2D1 282 aaPredicted RBP19.31■□□□□ 0.68
CASP4-210ENST00000531546 ZBTB12Q9Y330 459 aaPredicted RBP19.28■□□□□ 0.68
CASP4-210ENST00000531546 ZBTB22O15209 634 aa19.19■□□□□ 0.66
CASP4-210ENST00000531546 ATXN8OSP0DMR3 200 aa19.07■□□□□ 0.64
CASP4-210ENST00000531546 CHRDL2Q6WN34 429 aa19.06■□□□□ 0.64
CASP4-210ENST00000531546 AKT1S1Q96B36 256 aa19.02■□□□□ 0.64
CASP4-210ENST00000531546 OSCARQ8IYS5 282 aa18.94■□□□□ 0.62
CASP4-210ENST00000531546 REM2Q8IYK8 340 aaPredicted RBP18.78■□□□□ 0.6
CASP4-210ENST00000531546 FBLN2P98095 1184 aa18.73■□□□□ 0.59
CASP4-210ENST00000531546 SPDYE2BA6NHP3 402 aa18.61■□□□□ 0.57
CASP4-210ENST00000531546 SPDYE6P0CI01 402 aa18.61■□□□□ 0.57
CASP4-210ENST00000531546 SPDYE2Q495Y8 402 aa18.61■□□□□ 0.57
CASP4-210ENST00000531546 PITPNM1O00562 1244 aa18.6■□□□□ 0.57
CASP4-210ENST00000531546 PIP4P2Q8N4L2 257 aa18.57■□□□□ 0.56
CASP4-210ENST00000531546 FXR2P51116 673 aaKnown RBP eCLIP18.45■□□□□ 0.54
CASP4-210ENST00000531546 MKRN4PQ13434 485 aaPredicted RBP18.44■□□□□ 0.54
CASP4-210ENST00000531546 SP7Q8TDD2 431 aaPredicted RBP18.39■□□□□ 0.53
CASP4-210ENST00000531546 ZNF692Q9BU19 519 aaPredicted RBP18.34■□□□□ 0.53
CASP4-210ENST00000531546 SPDYE1Q8NFV5 336 aaPredicted RBP18.32■□□□□ 0.52
CASP4-210ENST00000531546 SSUH2Q9Y2M2 353 aa18.31■□□□□ 0.52
CASP4-210ENST00000531546 HAX1O00165 279 aa18.27■□□□□ 0.52
CASP4-210ENST00000531546 CSRNP3Q8WYN3 585 aa18.25■□□□□ 0.51
CASP4-210ENST00000531546 CLEC11AQ9Y240 323 aa18.25■□□□□ 0.51
CASP4-210ENST00000531546 PRKAR2AP13861 404 aaKnown RBP18.13■□□□□ 0.49
CASP4-210ENST00000531546 PABPN1Q86U42 306 aaKnown RBP eCLIP18.05■□□□□ 0.48
CASP4-210ENST00000531546 EHMT2Q96KQ7 1210 aa18■□□□□ 0.47
CASP4-210ENST00000531546 PRR29P0C7W0 189 aa17.95■□□□□ 0.46
CASP4-210ENST00000531546 EVX2Q03828 476 aa17.92■□□□□ 0.46
CASP4-210ENST00000531546 C19orf67A6NJJ6 358 aa17.87■□□□□ 0.45
CASP4-210ENST00000531546 CHADLQ6NUI6 762 aa17.85■□□□□ 0.45
CASP4-210ENST00000531546 STAG3Q9UJ98 1225 aa17.63■□□□□ 0.41
CASP4-210ENST00000531546 FARP1Q9Y4F1 1045 aaPredicted RBP17.63■□□□□ 0.41
CASP4-210ENST00000531546 SPDYE4A6NLX3 237 aa17.61■□□□□ 0.41
CASP4-210ENST00000531546 GABBR2O75899 941 aa17.6■□□□□ 0.41
CASP4-210ENST00000531546 CD44P16070 742 aaKnown RBP17.56■□□□□ 0.4
CASP4-210ENST00000531546 CLCN6P51797 869 aa17.44■□□□□ 0.38
CASP4-210ENST00000531546 CREBZFQ9NS37 354 aa17.43■□□□□ 0.38
CASP4-210ENST00000531546 ZNF579Q8NAF0 562 aaKnown RBP17.29■□□□□ 0.36
CASP4-210ENST00000531546 ZRANB1Q9UGI0 708 aa17.29■□□□□ 0.36
CASP4-210ENST00000531546 PAK3O75914 559 aaPredicted RBP17.23■□□□□ 0.35
CASP4-210ENST00000531546 LHX8Q68G74 356 aa17.23■□□□□ 0.35
CASP4-210ENST00000531546 NPM1P06748 294 aaKnown RBP eCLIP17.21■□□□□ 0.35
CASP4-210ENST00000531546 DCBLD2Q96PD2 775 aa17.18■□□□□ 0.34
CASP4-210ENST00000531546 POTEIP0CG38 1075 aa17.17■□□□□ 0.34
CASP4-210ENST00000531546 PROM2Q8N271 834 aa17.15■□□□□ 0.34
CASP4-210ENST00000531546 MNX1P50219 401 aaPredicted RBP17.1■□□□□ 0.33
CASP4-210ENST00000531546 GALR2O43603 387 aaPredicted RBP17.03■□□□□ 0.32
CASP4-210ENST00000531546 PHF12Q96QT6 1004 aa17■□□□□ 0.31
CASP4-210ENST00000531546 PLEKHG5O94827 1062 aa16.93■□□□□ 0.3
CASP4-210ENST00000531546 TSPYL2Q9H2G4 693 aaPredicted RBP16.81■□□□□ 0.28
CASP4-210ENST00000531546 MIER1Q8N108 512 aa16.8■□□□□ 0.28
CASP4-210ENST00000531546 MS4A3Q96HJ5 214 aa16.79■□□□□ 0.28
CASP4-210ENST00000531546 CCDC61Q9Y6R9 512 aa16.75■□□□□ 0.27
CASP4-210ENST00000531546 ASTLQ6HA08 431 aaPredicted RBP16.72■□□□□ 0.27
CASP4-210ENST00000531546 PLCD3Q8N3E9 789 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms