RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 CYP26C1Q6V0L0 522 aa22.66■■□□□ 1.22
SDCBP-209ENST00000522243 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.66■■□□□ 1.22
SDCBP-209ENST00000522243 UROC1Q96N76 676 aa22.66■■□□□ 1.22
SDCBP-209ENST00000522243 REEP2Q9BRK0 252 aa22.66■■□□□ 1.22
SDCBP-209ENST00000522243 PRKD2Q9BZL6 878 aa22.66■■□□□ 1.22
SDCBP-209ENST00000522243 KCNH6Q9H252 994 aa22.66■■□□□ 1.22
SDCBP-209ENST00000522243 BLOC1S4Q9NUP1 217 aa22.66■■□□□ 1.22
SDCBP-209ENST00000522243 ZDHHC7Q9NXF8 308 aa22.66■■□□□ 1.22
SDCBP-209ENST00000522243 KCNG1Q9UIX4 513 aa22.66■■□□□ 1.22
SDCBP-209ENST00000522243 FBXW11Q9UKB1 542 aa22.66■■□□□ 1.22
SDCBP-209ENST00000522243 MEFVO15553 781 aaPredicted RBP22.65■■□□□ 1.22
SDCBP-209ENST00000522243 TOM1L1O75674 476 aa22.65■■□□□ 1.22
SDCBP-209ENST00000522243 PLCG1P19174 1290 aa22.65■■□□□ 1.22
SDCBP-209ENST00000522243 FGFR3P22607 806 aa22.65■■□□□ 1.22
SDCBP-209ENST00000522243 TKTP29401 623 aaKnown RBP22.65■■□□□ 1.22
SDCBP-209ENST00000522243 MATR3P43243 847 aaKnown RBP eCLIP22.65■■□□□ 1.22
SDCBP-209ENST00000522243 PRSS33Q8NF86 280 aa22.65■■□□□ 1.22
SDCBP-209ENST00000522243 STAMQ92783 540 aa22.65■■□□□ 1.22
SDCBP-209ENST00000522243 MYADMQ96S97 322 aa22.65■■□□□ 1.22
SDCBP-209ENST00000522243 RHOBTB2Q9BYZ6 727 aa22.65■■□□□ 1.22
SDCBP-209ENST00000522243 FOXD4L1Q9NU39 408 aa22.65■■□□□ 1.22
SDCBP-209ENST00000522243 LARSQ9P2J5 1176 aaKnown RBP22.65■■□□□ 1.22
SDCBP-209ENST00000522243 CLIC4Q9Y696 253 aa22.65■■□□□ 1.22
SDCBP-209ENST00000522243 PDCD11Q14690 1871 aaKnown RBP22.64■■□□□ 1.22
SDCBP-209ENST00000522243 SLC26A4O43511 780 aa22.64■■□□□ 1.21
SDCBP-209ENST00000522243 AVPR2P30518 371 aa22.64■■□□□ 1.21
SDCBP-209ENST00000522243 OR1D2P34982 312 aa22.64■■□□□ 1.21
SDCBP-209ENST00000522243 LONP1P36776 959 aaKnown RBP22.64■■□□□ 1.21
SDCBP-209ENST00000522243 NCKAP1LP55160 1127 aa22.64■■□□□ 1.21
SDCBP-209ENST00000522243 NHLH1Q02575 133 aa22.64■■□□□ 1.21
SDCBP-209ENST00000522243 NOLC1Q14978 699 aaKnown RBP eCLIP22.64■■□□□ 1.21
SDCBP-209ENST00000522243 SPECC1Q5M775 1068 aa22.64■■□□□ 1.21
SDCBP-209ENST00000522243 FAM173BQ6P4H8 233 aa22.64■■□□□ 1.21
SDCBP-209ENST00000522243 PDXDC1Q6P996 788 aa22.64■■□□□ 1.21
SDCBP-209ENST00000522243 GET4Q7L5D6 327 aaPredicted RBP22.64■■□□□ 1.21
SDCBP-209ENST00000522243 HAUS6Q7Z4H7 955 aa22.64■■□□□ 1.21
SDCBP-209ENST00000522243 C18orf25Q96B23 403 aaPredicted RBP22.64■■□□□ 1.21
SDCBP-209ENST00000522243 BICD1Q96G01 975 aa22.64■■□□□ 1.21
SDCBP-209ENST00000522243 BACH2Q9BYV9 841 aa22.64■■□□□ 1.21
SDCBP-209ENST00000522243 KCNK12Q9HB15 430 aa22.64■■□□□ 1.21
SDCBP-209ENST00000522243 SLC38A7Q9NVC3 462 aa22.64■■□□□ 1.21
SDCBP-209ENST00000522243 DOCK6Q96HP0 2047 aa22.64■■□□□ 1.21
SDCBP-209ENST00000522243 PODXLO00592 558 aa22.63■■□□□ 1.21
SDCBP-209ENST00000522243 CLDN3O15551 220 aa22.63■■□□□ 1.21
SDCBP-209ENST00000522243 FAM13AO94988 1023 aa22.63■■□□□ 1.21
SDCBP-209ENST00000522243 KRT18P05783 430 aaKnown RBP22.63■■□□□ 1.21
SDCBP-209ENST00000522243 C8AP07357 584 aa22.63■■□□□ 1.21
SDCBP-209ENST00000522243 KCNE1P15382 129 aa22.63■■□□□ 1.21
SDCBP-209ENST00000522243 PDCP20941 246 aa22.63■■□□□ 1.21
SDCBP-209ENST00000522243 MARCKSP29966 332 aaPredicted RBP22.63■■□□□ 1.21
SDCBP-209ENST00000522243 HOXD11P31277 338 aaPredicted RBP22.63■■□□□ 1.21
SDCBP-209ENST00000522243 SLC10A6Q3KNW5 377 aa22.63■■□□□ 1.21
SDCBP-209ENST00000522243 LIN9Q5TKA1 542 aa22.63■■□□□ 1.21
SDCBP-209ENST00000522243 RSPO2Q6UXX9 243 aaPredicted RBP22.63■■□□□ 1.21
SDCBP-209ENST00000522243 ZPBP2Q6X784 338 aa22.63■■□□□ 1.21
SDCBP-209ENST00000522243 MYCT1Q8N699 235 aa22.63■■□□□ 1.21
SDCBP-209ENST00000522243 RSAD2Q8WXG1 361 aa22.63■■□□□ 1.21
SDCBP-209ENST00000522243 RAD54LQ92698 747 aa22.63■■□□□ 1.21
SDCBP-209ENST00000522243 DDX27Q96GQ7 796 aaKnown RBP22.63■■□□□ 1.21
SDCBP-209ENST00000522243 HAPLN2Q9GZV7 340 aa22.63■■□□□ 1.21
SDCBP-209ENST00000522243 ZHX3Q9H4I2 956 aa22.63■■□□□ 1.21
SDCBP-209ENST00000522243 CNTN3Q9P232 1028 aa22.63■■□□□ 1.21
SDCBP-209ENST00000522243 MTRRQ9UBK8 725 aa22.63■■□□□ 1.21
SDCBP-209ENST00000522243 ODF2LQ9ULJ1 636 aa22.63■■□□□ 1.21
SDCBP-209ENST00000522243 CDY1Q9Y6F8 540 aa22.63■■□□□ 1.21
SDCBP-209ENST00000522243 TRAPPC3O43617 180 aa22.62■■□□□ 1.21
SDCBP-209ENST00000522243 PAPLNO95428 1278 aa22.62■■□□□ 1.21
SDCBP-209ENST00000522243 SYT1P21579 422 aa22.62■■□□□ 1.21
SDCBP-209ENST00000522243 SPAG1Q07617 926 aa22.62■■□□□ 1.21
SDCBP-209ENST00000522243 RESTQ13127 1097 aa22.62■■□□□ 1.21
SDCBP-209ENST00000522243 TDGQ13569 410 aa22.62■■□□□ 1.21
SDCBP-209ENST00000522243 RAB33AQ14088 237 aa22.62■■□□□ 1.21
SDCBP-209ENST00000522243 PTPAQ15257 358 aa22.62■■□□□ 1.21
SDCBP-209ENST00000522243 PPM1LQ5SGD2 360 aa22.62■■□□□ 1.21
SDCBP-209ENST00000522243 USP49Q70CQ1 688 aa22.62■■□□□ 1.21
SDCBP-209ENST00000522243 GRASPQ7Z6J2 395 aaPredicted RBP22.62■■□□□ 1.21
SDCBP-209ENST00000522243 ALYREFQ86V81 257 aaKnown RBP22.62■■□□□ 1.21
SDCBP-209ENST00000522243 TMEM130Q8N3G9 435 aa22.62■■□□□ 1.21
SDCBP-209ENST00000522243 ST13P5Q8NFI4 369 aaPredicted RBP22.62■■□□□ 1.21
SDCBP-209ENST00000522243 EPSTI1Q96J88 318 aa22.62■■□□□ 1.21
SDCBP-209ENST00000522243 POLIQ9UNA4 740 aa22.62■■□□□ 1.21
SDCBP-209ENST00000522243 DOCK8Q8NF50 2099 aa22.61■■□□□ 1.21
SDCBP-209ENST00000522243 H0YCG3 227 aa22.61■■□□□ 1.21
SDCBP-209ENST00000522243 K7ENM7 598 aa22.61■■□□□ 1.21
SDCBP-209ENST00000522243 CCL16O15467 120 aa22.61■■□□□ 1.21
SDCBP-209ENST00000522243 NTHL1P78549 312 aa22.61■■□□□ 1.21
SDCBP-209ENST00000522243 CEBPZQ03701 1054 aaKnown RBP22.61■■□□□ 1.21
SDCBP-209ENST00000522243 MCL1Q07820 350 aa22.61■■□□□ 1.21
SDCBP-209ENST00000522243 CCSER1Q9C0I3 900 aa22.61■■□□□ 1.21
SDCBP-209ENST00000522243 NARSO43776 548 aaKnown RBP22.6■■□□□ 1.21
SDCBP-209ENST00000522243 TRAK2O60296 914 aa22.6■■□□□ 1.21
SDCBP-209ENST00000522243 CXCL8P10145 99 aa22.6■■□□□ 1.21
SDCBP-209ENST00000522243 TNFSF9P41273 254 aa22.6■■□□□ 1.21
SDCBP-209ENST00000522243 LIG4P49917 911 aa22.6■■□□□ 1.21
SDCBP-209ENST00000522243 AXDND1Q5T1B0 1012 aaPredicted RBP22.6■■□□□ 1.21
SDCBP-209ENST00000522243 ANKS3Q6ZW76 656 aa22.6■■□□□ 1.21
SDCBP-209ENST00000522243 SLC7A14Q8TBB6 771 aa22.6■■□□□ 1.21
SDCBP-209ENST00000522243 LARP4BQ92615 738 aaKnown RBP22.6■■□□□ 1.21
SDCBP-209ENST00000522243 PARVGQ9HBI0 331 aa22.6■■□□□ 1.21
SDCBP-209ENST00000522243 IGSF9Q9P2J2 1179 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms