RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 ZNF564Q8TBZ8 553 aaPredicted RBP12.77□□□□□ -0.36
ERGIC1-208ENST00000520399 TMEM60Q9H2L4 133 aa12.77□□□□□ -0.36
ERGIC1-208ENST00000520399 ACSL3O95573 720 aa12.77□□□□□ -0.37
ERGIC1-208ENST00000520399 AKR1B1P15121 316 aa12.77□□□□□ -0.37
ERGIC1-208ENST00000520399 RPS6KA3P51812 740 aa12.77□□□□□ -0.37
ERGIC1-208ENST00000520399 TTC23LQ6PF05 361 aa12.77□□□□□ -0.37
ERGIC1-208ENST00000520399 SRBD1Q8N5C6 995 aaKnown RBP12.77□□□□□ -0.37
ERGIC1-208ENST00000520399 BEST2Q8NFU1 509 aa12.77□□□□□ -0.37
ERGIC1-208ENST00000520399 WDR60Q8WVS4 1066 aa12.77□□□□□ -0.37
ERGIC1-208ENST00000520399 RAPGEF5Q92565 580 aa12.77□□□□□ -0.37
ERGIC1-208ENST00000520399 ZNF512BQ96KM6 892 aaPredicted RBP12.77□□□□□ -0.37
ERGIC1-208ENST00000520399 ZBED2Q9BTP6 218 aa12.77□□□□□ -0.37
ERGIC1-208ENST00000520399 TUFT1Q9NNX1 390 aa12.77□□□□□ -0.37
ERGIC1-208ENST00000520399 SH3BP1Q9Y3L3 701 aa12.77□□□□□ -0.37
ERGIC1-208ENST00000520399 EIF2S1P05198 315 aaKnown RBP12.77□□□□□ -0.37
ERGIC1-208ENST00000520399 HDDC2Q7Z4H3 204 aa12.77□□□□□ -0.37
ERGIC1-208ENST00000520399 ZNF467Q7Z7K2 595 aaPredicted RBP12.77□□□□□ -0.37
ERGIC1-208ENST00000520399 GUF1Q8N442 669 aaKnown RBP12.77□□□□□ -0.37
ERGIC1-208ENST00000520399 C2orf69Q8N8R5 385 aa12.77□□□□□ -0.37
ERGIC1-208ENST00000520399 FAM96AQ9H5X1 160 aa12.77□□□□□ -0.37
ERGIC1-208ENST00000520399 TOPORSQ9NS56 1045 aaPredicted RBP12.77□□□□□ -0.37
ERGIC1-208ENST00000520399 ZDHHC9Q9Y397 364 aa12.77□□□□□ -0.37
ERGIC1-208ENST00000520399 SKAP2O75563 359 aaPredicted RBP12.77□□□□□ -0.37
ERGIC1-208ENST00000520399 GUCY1A2P33402 732 aa12.77□□□□□ -0.37
ERGIC1-208ENST00000520399 TTLL4Q14679 1199 aa12.77□□□□□ -0.37
ERGIC1-208ENST00000520399 NLRP9Q7RTR0 991 aa12.77□□□□□ -0.37
ERGIC1-208ENST00000520399 GPD1LQ8N335 351 aa12.77□□□□□ -0.37
ERGIC1-208ENST00000520399 PHF20Q9BVI0 1012 aa12.77□□□□□ -0.37
ERGIC1-208ENST00000520399 EDEM3Q9BZQ6 932 aa12.77□□□□□ -0.37
ERGIC1-208ENST00000520399 VCPKMTQ9H867 229 aa12.77□□□□□ -0.37
ERGIC1-208ENST00000520399 EHD2Q9NZN4 543 aa12.77□□□□□ -0.37
ERGIC1-208ENST00000520399 HERC5Q9UII4 1024 aaKnown RBP12.77□□□□□ -0.37
ERGIC1-208ENST00000520399 C1orf167Q5SNV9 1468 aa12.77□□□□□ -0.37
ERGIC1-208ENST00000520399 A0A1W2PQC6 194 aa12.76□□□□□ -0.37
ERGIC1-208ENST00000520399 TUBA4AP68366 448 aa12.76□□□□□ -0.37
ERGIC1-208ENST00000520399 KCNB1Q14721 858 aa12.76□□□□□ -0.37
ERGIC1-208ENST00000520399 RWDD4Q6NW29 188 aaKnown RBP12.76□□□□□ -0.37
ERGIC1-208ENST00000520399 RAB42Q8N4Z0 105 aa12.76□□□□□ -0.37
ERGIC1-208ENST00000520399 CALML6Q8TD86 181 aa12.76□□□□□ -0.37
ERGIC1-208ENST00000520399 DMAP1Q9NPF5 467 aaPredicted RBP12.76□□□□□ -0.37
ERGIC1-208ENST00000520399 LCA5LO95447 670 aa12.76□□□□□ -0.37
ERGIC1-208ENST00000520399 IMPDH2P12268 514 aa12.76□□□□□ -0.37
ERGIC1-208ENST00000520399 MDM2Q00987 491 aaPredicted RBP12.76□□□□□ -0.37
ERGIC1-208ENST00000520399 TUBA3CQ13748 450 aa12.76□□□□□ -0.37
ERGIC1-208ENST00000520399 MXD4Q14582 209 aaPredicted RBP12.76□□□□□ -0.37
ERGIC1-208ENST00000520399 DRAP1Q14919 205 aaPredicted RBP12.76□□□□□ -0.37
ERGIC1-208ENST00000520399 NFIXQ14938 502 aa12.76□□□□□ -0.37
ERGIC1-208ENST00000520399 CCDC144BQ3MJ40 725 aa12.76□□□□□ -0.37
ERGIC1-208ENST00000520399 ZNF394Q53GI3 561 aa12.76□□□□□ -0.37
ERGIC1-208ENST00000520399 TMC5Q6UXY8 1006 aa12.76□□□□□ -0.37
ERGIC1-208ENST00000520399 ACAD11Q709F0 780 aa12.76□□□□□ -0.37
ERGIC1-208ENST00000520399 GORASP1Q9BQQ3 440 aa12.76□□□□□ -0.37
ERGIC1-208ENST00000520399 ACAD9Q9H845 621 aa12.76□□□□□ -0.37
ERGIC1-208ENST00000520399 GPBP1L1Q9HC44 474 aaPredicted RBP12.76□□□□□ -0.37
ERGIC1-208ENST00000520399 IP6K2Q9UHH9 426 aa12.76□□□□□ -0.37
ERGIC1-208ENST00000520399 R3HDM2Q9Y2K5 976 aaKnown RBP12.76□□□□□ -0.37
ERGIC1-208ENST00000520399 SESN1Q9Y6P5 492 aa12.76□□□□□ -0.37
ERGIC1-208ENST00000520399 FDX1P10109 184 aa12.76□□□□□ -0.37
ERGIC1-208ENST00000520399 DAB2IPQ5VWQ8 1189 aa12.76□□□□□ -0.37
ERGIC1-208ENST00000520399 FRMD5Q7Z6J6 570 aa12.76□□□□□ -0.37
ERGIC1-208ENST00000520399 MAML1Q92585 1016 aa12.76□□□□□ -0.37
ERGIC1-208ENST00000520399 C6orf203Q9P0P8 240 aaPredicted RBP12.76□□□□□ -0.37
ERGIC1-208ENST00000520399 BTBD7Q9P203 1132 aa12.76□□□□□ -0.37
ERGIC1-208ENST00000520399 VCPP55072 806 aaKnown RBP12.76□□□□□ -0.37
ERGIC1-208ENST00000520399 RHPN2Q8IUC4 686 aa12.76□□□□□ -0.37
ERGIC1-208ENST00000520399 RUBCNQ92622 972 aa12.76□□□□□ -0.37
ERGIC1-208ENST00000520399 MRPL4Q9BYD3 311 aaKnown RBP12.76□□□□□ -0.37
ERGIC1-208ENST00000520399 ABT1Q9ULW3 272 aaKnown RBP12.76□□□□□ -0.37
ERGIC1-208ENST00000520399 DIP2AQ14689 1571 aa12.75□□□□□ -0.37
ERGIC1-208ENST00000520399 WDR91A4D1P6 747 aa12.75□□□□□ -0.37
ERGIC1-208ENST00000520399 MSL3P1P0C860 447 aa12.75□□□□□ -0.37
ERGIC1-208ENST00000520399 TUBA1BP68363 451 aa12.75□□□□□ -0.37
ERGIC1-208ENST00000520399 TRIM71Q2Q1W2 868 aaKnown RBP12.75□□□□□ -0.37
ERGIC1-208ENST00000520399 LRRC8BQ6P9F7 803 aa12.75□□□□□ -0.37
ERGIC1-208ENST00000520399 LRRC31Q6UY01 552 aa12.75□□□□□ -0.37
ERGIC1-208ENST00000520399 TUBA1AQ71U36 451 aa12.75□□□□□ -0.37
ERGIC1-208ENST00000520399 HORMAD1Q86X24 394 aa12.75□□□□□ -0.37
ERGIC1-208ENST00000520399 CRLF3Q8IUI8 442 aa12.75□□□□□ -0.37
ERGIC1-208ENST00000520399 ICA1LQ8NDH6 482 aa12.75□□□□□ -0.37
ERGIC1-208ENST00000520399 COG1Q8WTW3 980 aa12.75□□□□□ -0.37
ERGIC1-208ENST00000520399 M0QYV0 167 aa12.75□□□□□ -0.37
ERGIC1-208ENST00000520399 SLC16A3O15427 465 aaKnown RBP12.75□□□□□ -0.37
ERGIC1-208ENST00000520399 BNIP3LO60238 219 aa12.75□□□□□ -0.37
ERGIC1-208ENST00000520399 PAX3P23760 479 aa12.75□□□□□ -0.37
ERGIC1-208ENST00000520399 GNA15P30679 374 aa12.75□□□□□ -0.37
ERGIC1-208ENST00000520399 AP1B1Q10567 949 aa12.75□□□□□ -0.37
ERGIC1-208ENST00000520399 NDUFA5Q16718 116 aa12.75□□□□□ -0.37
ERGIC1-208ENST00000520399 NGRNQ9NPE2 291 aaKnown RBP12.75□□□□□ -0.37
ERGIC1-208ENST00000520399 SNX24Q9Y343 169 aa12.75□□□□□ -0.37
ERGIC1-208ENST00000520399 FOXN1O15353 648 aa12.75□□□□□ -0.37
ERGIC1-208ENST00000520399 FCER1AP12319 257 aa12.75□□□□□ -0.37
ERGIC1-208ENST00000520399 SERPINB1P30740 379 aa12.75□□□□□ -0.37
ERGIC1-208ENST00000520399 EPHA7Q15375 998 aa12.75□□□□□ -0.37
ERGIC1-208ENST00000520399 KIAA1755Q5JYT7 1200 aa12.75□□□□□ -0.37
ERGIC1-208ENST00000520399 TBC1D19Q8N5T2 526 aa12.75□□□□□ -0.37
ERGIC1-208ENST00000520399 SH3KBP1Q96B97 665 aa12.75□□□□□ -0.37
ERGIC1-208ENST00000520399 OTULINQ96BN8 352 aa12.75□□□□□ -0.37
ERGIC1-208ENST00000520399 FAM129AQ9BZQ8 928 aa12.75□□□□□ -0.37
ERGIC1-208ENST00000520399 DDX56Q9NY93 547 aaKnown RBP12.75□□□□□ -0.37
ERGIC1-208ENST00000520399 PRPF4O43172 522 aaKnown RBP eCLIP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms