RNA–Protein interactions for RNA: ENST00000519381.1

VPS37A-204, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 4

Gene VPS37A, Length 575 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-204ENST00000519381 NBR1Q14596 966 aa17.42■□□□□ 0.38
VPS37A-204ENST00000519381 ZRSR1Q15695 479 aaKnown RBP17.42■□□□□ 0.38
VPS37A-204ENST00000519381 PARM1Q6UWI2 310 aa17.42■□□□□ 0.38
VPS37A-204ENST00000519381 SNX27Q96L92 541 aa17.42■□□□□ 0.38
VPS37A-204ENST00000519381 PPP1R10Q96QC0 940 aaKnown RBP17.42■□□□□ 0.38
VPS37A-204ENST00000519381 SEMA4AQ9H3S1 761 aa17.42■□□□□ 0.38
VPS37A-204ENST00000519381 KMT5AQ9NQR1 393 aa17.42■□□□□ 0.38
VPS37A-204ENST00000519381 MRPS23Q9Y3D9 190 aaKnown RBP17.42■□□□□ 0.38
VPS37A-204ENST00000519381 NUB1Q9Y5A7 615 aa17.42■□□□□ 0.38
VPS37A-204ENST00000519381 FAM186AA6NE01 2351 aa17.42■□□□□ 0.38
VPS37A-204ENST00000519381 LAD1O00515 517 aa17.41■□□□□ 0.38
VPS37A-204ENST00000519381 ADAM12O43184 909 aa17.41■□□□□ 0.38
VPS37A-204ENST00000519381 EDN1P05305 212 aa17.41■□□□□ 0.38
VPS37A-204ENST00000519381 FGFR3P22607 806 aa17.41■□□□□ 0.38
VPS37A-204ENST00000519381 TKTP29401 623 aaKnown RBP17.41■□□□□ 0.38
VPS37A-204ENST00000519381 GRM5P41594 1212 aa17.41■□□□□ 0.38
VPS37A-204ENST00000519381 ARPP19P56211 112 aa17.41■□□□□ 0.38
VPS37A-204ENST00000519381 STRN3Q13033 797 aa17.41■□□□□ 0.38
VPS37A-204ENST00000519381 PTGDRQ13258 359 aa17.41■□□□□ 0.38
VPS37A-204ENST00000519381 PDIA5Q14554 519 aa17.41■□□□□ 0.38
VPS37A-204ENST00000519381 NAB2Q15742 525 aa17.41■□□□□ 0.38
VPS37A-204ENST00000519381 NT5DC1Q5TFE4 455 aa17.41■□□□□ 0.38
VPS37A-204ENST00000519381 ERICH6BQ5W0A0 696 aa17.41■□□□□ 0.38
VPS37A-204ENST00000519381 RTL10Q7L3V2 364 aa17.41■□□□□ 0.38
VPS37A-204ENST00000519381 PJA1Q8NG27 643 aa17.41■□□□□ 0.38
VPS37A-204ENST00000519381 ING5Q8WYH8 240 aa17.41■□□□□ 0.38
VPS37A-204ENST00000519381 FGF14Q92915 247 aa17.41■□□□□ 0.38
VPS37A-204ENST00000519381 DDX27Q96GQ7 796 aaKnown RBP17.41■□□□□ 0.38
VPS37A-204ENST00000519381 BCO2Q9BYV7 579 aa17.41■□□□□ 0.38
VPS37A-204ENST00000519381 GOLGA2P5Q9HBQ8 144 aa17.41■□□□□ 0.38
VPS37A-204ENST00000519381 FOXD4L1Q9NU39 408 aa17.41■□□□□ 0.38
VPS37A-204ENST00000519381 RIF1Q5UIP0 2472 aaKnown RBP17.41■□□□□ 0.38
VPS37A-204ENST00000519381 MYH15Q9Y2K3 1946 aa17.41■□□□□ 0.38
VPS37A-204ENST00000519381 H7C4K7 107 aa17.4■□□□□ 0.38
VPS37A-204ENST00000519381 I3L4J1 428 aa17.4■□□□□ 0.38
VPS37A-204ENST00000519381 PODXLO00592 558 aa17.4■□□□□ 0.38
VPS37A-204ENST00000519381 HIP1RO75146 1068 aa17.4■□□□□ 0.38
VPS37A-204ENST00000519381 LMNAP02545 664 aaKnown RBP17.4■□□□□ 0.38
VPS37A-204ENST00000519381 POU2F2P09086 479 aa17.4■□□□□ 0.38
VPS37A-204ENST00000519381 MATR3P43243 847 aaKnown RBP eCLIP17.4■□□□□ 0.383e-6■■■□□ 17.1
VPS37A-204ENST00000519381 NPTX2P47972 431 aa17.4■□□□□ 0.38
VPS37A-204ENST00000519381 GPC5P78333 572 aa17.4■□□□□ 0.38
VPS37A-204ENST00000519381 FOXK2Q01167 660 aa17.4■□□□□ 0.38
VPS37A-204ENST00000519381 SNW1Q13573 536 aaKnown RBP17.4■□□□□ 0.38
VPS37A-204ENST00000519381 UBXN2BQ14CS0 331 aa17.4■□□□□ 0.38
VPS37A-204ENST00000519381 MLF2Q15773 248 aaPredicted RBP17.4■□□□□ 0.38
VPS37A-204ENST00000519381 ECM1Q16610 540 aa17.4■□□□□ 0.38
VPS37A-204ENST00000519381 UPP1Q16831 310 aa17.4■□□□□ 0.38
VPS37A-204ENST00000519381 MCTP1Q6DN14 999 aa17.4■□□□□ 0.38
VPS37A-204ENST00000519381 ELMOD1Q8N336 334 aa17.4■□□□□ 0.38
VPS37A-204ENST00000519381 ITFG1Q8TB96 612 aa17.4■□□□□ 0.38
VPS37A-204ENST00000519381 CDK5RAP3Q96JB5 506 aa17.4■□□□□ 0.38
VPS37A-204ENST00000519381 ACAP3Q96P50 834 aa17.4■□□□□ 0.38
VPS37A-204ENST00000519381 ACO2Q99798 780 aaKnown RBP17.4■□□□□ 0.38
VPS37A-204ENST00000519381 KXD1Q9BQD3 176 aa17.4■□□□□ 0.38
VPS37A-204ENST00000519381 CDT1Q9H211 546 aa17.4■□□□□ 0.38
VPS37A-204ENST00000519381 CXCL16Q9H2A7 254 aa17.4■□□□□ 0.38
VPS37A-204ENST00000519381 KCNH3Q9ULD8 1083 aa17.4■□□□□ 0.38
VPS37A-204ENST00000519381 RBM19Q9Y4C8 960 aaKnown RBP17.4■□□□□ 0.38
VPS37A-204ENST00000519381 BACE2Q9Y5Z0 518 aa17.4■□□□□ 0.38
VPS37A-204ENST00000519381 VWA8A3KMH1 1905 aa17.4■□□□□ 0.38
VPS37A-204ENST00000519381 SMIM28A0A1B0GU29 152 aa17.39■□□□□ 0.37
VPS37A-204ENST00000519381 E9PMD0 336 aa17.39■□□□□ 0.37
VPS37A-204ENST00000519381 MCF2P10911 925 aa17.39■□□□□ 0.37
VPS37A-204ENST00000519381 BRCC3P46736 316 aa17.39■□□□□ 0.37
VPS37A-204ENST00000519381 SMTNP53814 917 aa17.39■□□□□ 0.37
VPS37A-204ENST00000519381 PRKCQQ04759 706 aa17.39■□□□□ 0.37
VPS37A-204ENST00000519381 DTHD1Q6ZMT9 781 aa17.39■□□□□ 0.37
VPS37A-204ENST00000519381 C1orf210Q8IVY1 113 aa17.39■□□□□ 0.37
VPS37A-204ENST00000519381 CEP120Q8N960 986 aa17.39■□□□□ 0.37
VPS37A-204ENST00000519381 FOXQ1Q9C009 403 aa17.39■□□□□ 0.37
VPS37A-204ENST00000519381 TMEM134Q9H6X4 195 aa17.39■□□□□ 0.37
VPS37A-204ENST00000519381 C17orf75Q9HAS0 396 aa17.39■□□□□ 0.37
VPS37A-204ENST00000519381 HCFC1R1Q9NWW0 138 aa17.39■□□□□ 0.37
VPS37A-204ENST00000519381 ANKFY1Q9P2R3 1169 aa17.39■□□□□ 0.37
VPS37A-204ENST00000519381 KCNG1Q9UIX4 513 aa17.39■□□□□ 0.37
VPS37A-204ENST00000519381 R4GN57 208 aa17.39■□□□□ 0.37
VPS37A-204ENST00000519381 VPS13AQ96RL7 3174 aa17.38■□□□□ 0.37
VPS37A-204ENST00000519381 KANSL1LA0AUZ9 987 aa17.38■□□□□ 0.37
VPS37A-204ENST00000519381 MCM4P33991 863 aa17.38■□□□□ 0.37
VPS37A-204ENST00000519381 ID4P47928 161 aa17.38■□□□□ 0.37
VPS37A-204ENST00000519381 VARS2Q5ST30 1063 aaKnown RBP17.38■□□□□ 0.37
VPS37A-204ENST00000519381 MPZL3Q6UWV2 235 aa17.38■□□□□ 0.37
VPS37A-204ENST00000519381 NPAS3Q8IXF0 933 aa17.38■□□□□ 0.37
VPS37A-204ENST00000519381 IGSF22Q8N9C0 903 aa17.38■□□□□ 0.37
VPS37A-204ENST00000519381 BICD1Q96G01 975 aa17.38■□□□□ 0.37
VPS37A-204ENST00000519381 TIPINQ9BVW5 301 aa17.38■□□□□ 0.37
VPS37A-204ENST00000519381 TARS2Q9BW92 718 aaKnown RBP17.38■□□□□ 0.37
VPS37A-204ENST00000519381 CYP4F11Q9HBI6 524 aa17.38■□□□□ 0.37
VPS37A-204ENST00000519381 SPATA6Q9NWH7 488 aaPredicted RBP17.38■□□□□ 0.37
VPS37A-204ENST00000519381 DNMT3BQ9UBC3 853 aaKnown RBP17.38■□□□□ 0.37
VPS37A-204ENST00000519381 PCDHB6Q9Y5E3 794 aa17.38■□□□□ 0.37
VPS37A-204ENST00000519381 MIA3Q5JRA6 1907 aa17.38■□□□□ 0.37
VPS37A-204ENST00000519381 TRIP11Q15643 1979 aa17.37■□□□□ 0.37
VPS37A-204ENST00000519381 SYN3O14994 580 aa17.37■□□□□ 0.37
VPS37A-204ENST00000519381 SLC16A4O15374 487 aa17.37■□□□□ 0.37
VPS37A-204ENST00000519381 LAMTOR5O43504 91 aa17.37■□□□□ 0.37
VPS37A-204ENST00000519381 SEC24BO95487 1268 aa17.37■□□□□ 0.37
VPS37A-204ENST00000519381 RHOP08100 348 aa17.37■□□□□ 0.37
VPS37A-204ENST00000519381 U2AF2P26368 475 aaKnown RBP eCLIP17.37■□□□□ 0.378e-14■■■■□ 21.6
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms