RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 CLIP2Q9UDT6 1046 aa0.01□□□□□ -2.41
RNU6-542P-201ENST00000516405 PCDHB10Q9UN67 800 aa0.01□□□□□ -2.41
RNU6-542P-201ENST00000516405 CLCA2Q9UQC9 943 aa0.01□□□□□ -2.41
RNU6-542P-201ENST00000516405 A0A1B0GTW7 788 aa0□□□□□ -2.41
RNU6-542P-201ENST00000516405 VWC2LB2RUY7 222 aa0□□□□□ -2.41
RNU6-542P-201ENST00000516405 TRAFD1O14545 582 aaPredicted RBP0□□□□□ -2.41
RNU6-542P-201ENST00000516405 ZNF213O14771 459 aa0□□□□□ -2.41
RNU6-542P-201ENST00000516405 TBX1O43435 398 aa0□□□□□ -2.41
RNU6-542P-201ENST00000516405 PROM1O43490 865 aa0□□□□□ -2.41
RNU6-542P-201ENST00000516405 IGLV2-11P01706 119 aa0□□□□□ -2.41
RNU6-542P-201ENST00000516405 SCG5P05408 212 aa0□□□□□ -2.41
RNU6-542P-201ENST00000516405 FGF2P09038 288 aa0□□□□□ -2.41
RNU6-542P-201ENST00000516405 CFC1BP0CG36 223 aa0□□□□□ -2.41
RNU6-542P-201ENST00000516405 CFC1P0CG37 223 aa0□□□□□ -2.41
RNU6-542P-201ENST00000516405 CYP19A1P11511 503 aaPredicted RBP0□□□□□ -2.41
RNU6-542P-201ENST00000516405 IL1R2P27930 398 aa0□□□□□ -2.41
RNU6-542P-201ENST00000516405 HOXA11P31270 313 aaPredicted RBP0□□□□□ -2.41
RNU6-542P-201ENST00000516405 ARRB2P32121 409 aa0□□□□□ -2.41
RNU6-542P-201ENST00000516405 ME1P48163 572 aa0□□□□□ -2.41
RNU6-542P-201ENST00000516405 WNT3AP56704 352 aa0□□□□□ -2.41
RNU6-542P-201ENST00000516405 DLK1P80370 383 aa0□□□□□ -2.41
RNU6-542P-201ENST00000516405 LTBQ06643 244 aa0□□□□□ -2.41
RNU6-542P-201ENST00000516405 CCDC6Q16204 474 aa0□□□□□ -2.41
RNU6-542P-201ENST00000516405 NBPF8Q3BBV2 869 aa0□□□□□ -2.41
RNU6-542P-201ENST00000516405 ZNF718Q3SXZ3 478 aa0□□□□□ -2.41
RNU6-542P-201ENST00000516405 GNPTABQ3T906 1256 aa0□□□□□ -2.41
RNU6-542P-201ENST00000516405 LBX2Q6XYB7 198 aa0□□□□□ -2.41
RNU6-542P-201ENST00000516405 Q6ZVH6 145 aa0□□□□□ -2.41
RNU6-542P-201ENST00000516405 RAPH1Q70E73 1250 aa0□□□□□ -2.41
RNU6-542P-201ENST00000516405 KRTAP11-1Q8IUC1 163 aa0□□□□□ -2.41
RNU6-542P-201ENST00000516405 TRIM59Q8IWR1 403 aa0□□□□□ -2.41
RNU6-542P-201ENST00000516405 ZZZ3Q8IYH5 903 aa0□□□□□ -2.41
RNU6-542P-201ENST00000516405 SLC34A3Q8N130 599 aa0□□□□□ -2.41
RNU6-542P-201ENST00000516405 FAM43AQ8N2R8 423 aa0□□□□□ -2.41
RNU6-542P-201ENST00000516405 CAMKK1Q8N5S9 505 aa0□□□□□ -2.41
RNU6-542P-201ENST00000516405 IQCF1Q8N6M8 205 aa0□□□□□ -2.41
RNU6-542P-201ENST00000516405 OR5M3Q8NGP4 307 aa0□□□□□ -2.41
RNU6-542P-201ENST00000516405 KLHL6Q8WZ60 621 aa0□□□□□ -2.41
RNU6-542P-201ENST00000516405 IL17RAQ96F46 866 aa0□□□□□ -2.41
RNU6-542P-201ENST00000516405 FBXL20Q96IG2 436 aa0□□□□□ -2.41
RNU6-542P-201ENST00000516405 MRGPRX3Q96LB0 322 aa0□□□□□ -2.41
RNU6-542P-201ENST00000516405 NODALQ96S42 347 aa0□□□□□ -2.41
RNU6-542P-201ENST00000516405 SENP6Q9GZR1 1112 aaPredicted RBP0□□□□□ -2.41
RNU6-542P-201ENST00000516405 MYLK2Q9H1R3 596 aa0□□□□□ -2.41
RNU6-542P-201ENST00000516405 SCRT2Q9NQ03 307 aa0□□□□□ -2.41
RNU6-542P-201ENST00000516405 CCDC177Q9NQR7 707 aaPredicted RBP0□□□□□ -2.41
RNU6-542P-201ENST00000516405 KCNQ5Q9NR82 932 aa0□□□□□ -2.41
RNU6-542P-201ENST00000516405 PRR34Q9NV39 138 aa0□□□□□ -2.41
RNU6-542P-201ENST00000516405 RNF19AQ9NV58 838 aa0□□□□□ -2.41
RNU6-542P-201ENST00000516405 INTS7Q9NVH2 962 aaKnown RBP0□□□□□ -2.41
RNU6-542P-201ENST00000516405 USP36Q9P275 1121 aaKnown RBP0□□□□□ -2.41
RNU6-542P-201ENST00000516405 NFS1Q9Y697 457 aa0□□□□□ -2.41
RNU6-542P-201ENST00000516405 AATKQ6ZMQ8 1374 aa-0.01□□□□□ -2.41
RNU6-542P-201ENST00000516405 WDR27A2RRH5 827 aa-0.01□□□□□ -2.41
RNU6-542P-201ENST00000516405 PRAMEF22A3QJZ6 481 aa-0.01□□□□□ -2.41
RNU6-542P-201ENST00000516405 FAM83GA6ND36 823 aa-0.01□□□□□ -2.41
RNU6-542P-201ENST00000516405 PRAMEF25A6NGN4 478 aa-0.01□□□□□ -2.41
RNU6-542P-201ENST00000516405 JTBO76095 146 aa-0.01□□□□□ -2.41
RNU6-542P-201ENST00000516405 MMEP08473 750 aa-0.01□□□□□ -2.41
RNU6-542P-201ENST00000516405 HSP90B1P14625 803 aaKnown RBP-0.01□□□□□ -2.41
RNU6-542P-201ENST00000516405 MGAT1P26572 445 aa-0.01□□□□□ -2.41
RNU6-542P-201ENST00000516405 MCM4P33991 863 aa-0.01□□□□□ -2.41
RNU6-542P-201ENST00000516405 CCT8P50990 548 aa-0.01□□□□□ -2.41
RNU6-542P-201ENST00000516405 HERVK_113P62684 666 aa-0.01□□□□□ -2.41
RNU6-542P-201ENST00000516405 FMR1Q06787 632 aaKnown RBP eCLIP-0.01□□□□□ -2.41
RNU6-542P-201ENST00000516405 LMAN2Q12907 356 aa-0.01□□□□□ -2.41
RNU6-542P-201ENST00000516405 PTPRRQ15256 657 aa-0.01□□□□□ -2.41
RNU6-542P-201ENST00000516405 TAF1CQ15572 869 aaPredicted RBP-0.01□□□□□ -2.41
RNU6-542P-201ENST00000516405 TSHZ3Q63HK5 1081 aa-0.01□□□□□ -2.41
RNU6-542P-201ENST00000516405 EFCAB12Q6NXP0 572 aa-0.01□□□□□ -2.41
RNU6-542P-201ENST00000516405 USP17L6PQ6QN14 398 aa-0.01□□□□□ -2.41
RNU6-542P-201ENST00000516405 PRSS57Q6UWY2 283 aa-0.01□□□□□ -2.41
RNU6-542P-201ENST00000516405 RTL10Q7L3V2 364 aa-0.01□□□□□ -2.41
RNU6-542P-201ENST00000516405 RELL1Q8IUW5 271 aa-0.01□□□□□ -2.41
RNU6-542P-201ENST00000516405 FBXL16Q8N461 479 aa-0.01□□□□□ -2.41
RNU6-542P-201ENST00000516405 BVESQ8NE79 360 aa-0.01□□□□□ -2.41
RNU6-542P-201ENST00000516405 C1orf159Q96HA4 380 aa-0.01□□□□□ -2.41
RNU6-542P-201ENST00000516405 WDR92Q96MX6 357 aa-0.01□□□□□ -2.41
RNU6-542P-201ENST00000516405 TM9SF2Q99805 663 aa-0.01□□□□□ -2.41
RNU6-542P-201ENST00000516405 RSRP1Q9BUV0 290 aa-0.01□□□□□ -2.41
RNU6-542P-201ENST00000516405 WFDC1Q9HC57 220 aa-0.01□□□□□ -2.41
RNU6-542P-201ENST00000516405 DNAI1Q9UI46 699 aa-0.01□□□□□ -2.41
RNU6-542P-201ENST00000516405 SRPK3Q9UPE1 567 aa-0.01□□□□□ -2.41
RNU6-542P-201ENST00000516405 SCAF8Q9UPN6 1271 aaKnown RBP-0.01□□□□□ -2.41
RNU6-542P-201ENST00000516405 PCDHB6Q9Y5E3 794 aa-0.01□□□□□ -2.41
RNU6-542P-201ENST00000516405 AK5Q9Y6K8 562 aa-0.01□□□□□ -2.41
RNU6-542P-201ENST00000516405 ZMYM2Q9UBW7 1377 aa-0.02□□□□□ -2.41
RNU6-542P-201ENST00000516405 TBKBP1A7MCY6 615 aa-0.02□□□□□ -2.41
RNU6-542P-201ENST00000516405 SMTNL1A8MU46 457 aa-0.02□□□□□ -2.41
RNU6-542P-201ENST00000516405 DAPK3O43293 454 aa-0.02□□□□□ -2.41
RNU6-542P-201ENST00000516405 TULP3O75386 442 aa-0.02□□□□□ -2.41
RNU6-542P-201ENST00000516405 CHRM2P08172 466 aa-0.02□□□□□ -2.41
RNU6-542P-201ENST00000516405 SRGNP10124 158 aa-0.02□□□□□ -2.41
RNU6-542P-201ENST00000516405 PIM1P11309 404 aaPredicted RBP-0.02□□□□□ -2.41
RNU6-542P-201ENST00000516405 FGFR4P22455 802 aa-0.02□□□□□ -2.41
RNU6-542P-201ENST00000516405 GUCY2CP25092 1073 aa-0.02□□□□□ -2.41
RNU6-542P-201ENST00000516405 GRK2P25098 689 aa-0.02□□□□□ -2.41
RNU6-542P-201ENST00000516405 HOXC12P31275 282 aa-0.02□□□□□ -2.41
RNU6-542P-201ENST00000516405 GRK3P35626 688 aa-0.02□□□□□ -2.41
RNU6-542P-201ENST00000516405 ZNF165P49910 485 aa-0.02□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms